RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 LCHNA4D1U4 455 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 ZNF197O14709 1029 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 TCEA3O75764 348 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 ABLIM3O94929 683 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 MYOGP15173 224 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 SERPINB4P48594 390 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 NSUN2Q08J23 767 aaKnown RBP eCLIP9.42□□□□□ -0.9
SSR3-201ENST00000265044 PDAP1Q13442 181 aaKnown RBP9.42□□□□□ -0.9
SSR3-201ENST00000265044 SKIV2LQ15477 1246 aaKnown RBP9.42□□□□□ -0.9
SSR3-201ENST00000265044 SLC1A5Q15758 541 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 TMEM240Q5SV17 173 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 ZNF449Q6P9G9 518 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 C12orf76Q8N812 135 aaPredicted RBP9.42□□□□□ -0.9
SSR3-201ENST00000265044 ZSCAN18Q8TBC5 510 aaPredicted RBP9.42□□□□□ -0.9
SSR3-201ENST00000265044 MLPHQ9BV36 600 aaPredicted RBP9.42□□□□□ -0.9
SSR3-201ENST00000265044 SLCO1B3Q9NPD5 702 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.42□□□□□ -0.9
SSR3-201ENST00000265044 DCDC2Q9UHG0 476 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 FBXO5Q9UKT4 447 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 RUVBL2Q9Y230 463 aaKnown RBP9.42□□□□□ -0.9
SSR3-201ENST00000265044 ACOT9Q9Y305 439 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 ACTL7AQ9Y615 435 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 SDK1Q7Z5N4 2213 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 FAM237BA0A1B0GVD1 139 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 TP73O15350 636 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 PRKCGP05129 697 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 CTPS1P17812 591 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 CHRM3P20309 590 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 GLDCP23378 1020 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 SLC6A4P31645 630 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 CSKP41240 450 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 ARFIP2P53365 341 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 NTHL1P78549 312 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 ARMC12Q5T9G4 340 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 PPP2R2DQ66LE6 453 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 ZCCHC23Q6ZST2 131 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 LDB1Q86U70 411 aaPredicted RBP9.42□□□□□ -0.9
SSR3-201ENST00000265044 BBS7Q8IWZ6 715 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 CKAP2Q8WWK9 683 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 USP13Q92995 863 aaPredicted RBP9.42□□□□□ -0.9
SSR3-201ENST00000265044 NDNQ99608 321 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 TNKS2Q9H2K2 1166 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 ZNF334Q9HCZ1 680 aaPredicted RBP9.42□□□□□ -0.9
SSR3-201ENST00000265044 KIAA1522Q9P206 1035 aaPredicted RBP9.42□□□□□ -0.9
SSR3-201ENST00000265044 PPARGC1AQ9UBK2 798 aaKnown RBP9.42□□□□□ -0.9
SSR3-201ENST00000265044 PLA2G4CQ9UP65 541 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 ILVBLA1L0T0 632 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 USP1O94782 785 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 LUC7L3O95232 432 aaKnown RBP9.41□□□□□ -0.9
SSR3-201ENST00000265044 ZNF33AQ06730 810 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 ARHGEF7Q14155 803 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 RCN2Q14257 317 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 CSHL1Q14406 222 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 STXBP5Q5T5C0 1151 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 ATXN7L2Q5T6C5 722 aaPredicted RBP9.41□□□□□ -0.9
SSR3-201ENST00000265044 ARID3BQ8IVW6 561 aaPredicted RBP9.41□□□□□ -0.9
SSR3-201ENST00000265044 DCAKDQ8WVC6 231 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 GRAMD1AQ96CP6 724 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 SERAC1Q96JX3 654 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 ZNF778Q96MU6 729 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 LRRC37BQ96QE4 947 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 VN1R3Q9BXE9 311 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 GPAMQ9HCL2 828 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 ABCB8Q9NUT2 735 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 EVLQ9UI08 416 aaPredicted RBP9.41□□□□□ -0.9
SSR3-201ENST00000265044 SOX13Q9UN79 622 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 STK38LQ9Y2H1 464 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 ZNF510Q9Y2H8 683 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 INSIG1O15503 277 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 IGSF6O95976 241 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 RHOP08100 348 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 EPCAMP16422 314 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 HMGA1P17096 107 aaKnown RBP9.41□□□□□ -0.9
SSR3-201ENST00000265044 HLA-DPA1P20036 260 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 TAC1P20366 129 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 MZF1P28698 734 aaPredicted RBP9.41□□□□□ -0.9
SSR3-201ENST00000265044 POM121L1PQ3SYA9 428 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 PPM1JQ5JR12 505 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 NLRP9Q7RTR0 991 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 DENND6AQ8IWF6 608 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 MRPL43Q8N983 215 aaKnown RBP9.41□□□□□ -0.9
SSR3-201ENST00000265044 GRIN3AQ8TCU5 1115 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 GANCQ8TET4 914 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 ZNF75CPQ92670 426 aaPredicted RBP9.41□□□□□ -0.9
SSR3-201ENST00000265044 PPP1R36Q96LQ0 422 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 TBATAQ96M53 351 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 MECRQ9BV79 373 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 TTLL2Q9BWV7 592 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 TDP1Q9NUW8 608 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 ARL2BPQ9Y2Y0 163 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 RAI2Q9Y5P3 530 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 BHMG1C9JSJ3 638 aaPredicted RBP9.41□□□□□ -0.9
SSR3-201ENST00000265044 RHOBTB1O94844 696 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 IGLV3-25P01717 112 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 KLKB1P03952 638 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 FGF1P05230 155 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 NFKBIAP25963 317 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 NRIP1P48552 1158 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 GET4Q7L5D6 327 aaPredicted RBP9.41□□□□□ -0.9
SSR3-201ENST00000265044 SETD3Q86TU7 594 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms