RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 PDZK1P1A8MUH7 402 aa16.44■□□□□ 0.22
GPC1-201ENST00000264039 NCF1CA8MVU1 366 aaPredicted RBP16.44■□□□□ 0.22
GPC1-201ENST00000264039 SYNCRIPO60506 623 aaKnown RBP16.44■□□□□ 0.22
GPC1-201ENST00000264039 CLPXO76031 633 aa16.44■□□□□ 0.22
GPC1-201ENST00000264039 NCF1P14598 390 aaPredicted RBP16.44■□□□□ 0.22
GPC1-201ENST00000264039 CHRM3P20309 590 aa16.44■□□□□ 0.22
GPC1-201ENST00000264039 RPS9P46781 194 aaKnown RBP16.44■□□□□ 0.22
GPC1-201ENST00000264039 SNRNP48Q6IEG0 339 aaKnown RBP16.44■□□□□ 0.22
GPC1-201ENST00000264039 NT5DC4Q86YG4 428 aa16.44■□□□□ 0.22
GPC1-201ENST00000264039 SIAH1Q8IUQ4 282 aa16.44■□□□□ 0.22
GPC1-201ENST00000264039 CHERPQ8IWX8 916 aaKnown RBP16.44■□□□□ 0.22
GPC1-201ENST00000264039 WDTC1Q8N5D0 677 aa16.44■□□□□ 0.22
GPC1-201ENST00000264039 ARFGAP1Q8N6T3 406 aa16.44■□□□□ 0.22
GPC1-201ENST00000264039 TERB1Q8NA31 727 aa16.44■□□□□ 0.22
GPC1-201ENST00000264039 CELF6Q96J87 481 aaKnown RBP16.44■□□□□ 0.22
GPC1-201ENST00000264039 FSD1LQ9BXM9 530 aa16.44■□□□□ 0.22
GPC1-201ENST00000264039 SMPD3Q9NY59 655 aaPredicted RBP16.44■□□□□ 0.22
GPC1-201ENST00000264039 DKK3Q9UBP4 350 aa16.44■□□□□ 0.22
GPC1-201ENST00000264039 PRELID1Q9Y255 219 aa16.44■□□□□ 0.22
GPC1-201ENST00000264039 BTRCQ9Y297 605 aa16.44■□□□□ 0.22
GPC1-201ENST00000264039 GIT1Q9Y2X7 761 aa16.44■□□□□ 0.22
GPC1-201ENST00000264039 LOC100506127A0A0U1RQW1 187 aa16.44■□□□□ 0.22
GPC1-201ENST00000264039 MGEA5O60502 916 aa16.44■□□□□ 0.22
GPC1-201ENST00000264039 GSNP06396 782 aa16.44■□□□□ 0.22
GPC1-201ENST00000264039 GJB1P08034 283 aa16.44■□□□□ 0.22
GPC1-201ENST00000264039 ZNF26P17031 533 aaPredicted RBP16.44■□□□□ 0.22
GPC1-201ENST00000264039 PRDX6P30041 224 aa16.44■□□□□ 0.22
GPC1-201ENST00000264039 SLC7A1P30825 629 aa16.44■□□□□ 0.22
GPC1-201ENST00000264039 ARRB2P32121 409 aa16.44■□□□□ 0.22
GPC1-201ENST00000264039 SULT1E1P49888 294 aa16.44■□□□□ 0.22
GPC1-201ENST00000264039 NDST1P52848 882 aa16.44■□□□□ 0.22
GPC1-201ENST00000264039 FPGSQ05932 587 aa16.44■□□□□ 0.22
GPC1-201ENST00000264039 KIZQ2M2Z5 673 aa16.44■□□□□ 0.22
GPC1-201ENST00000264039 OR8H2Q8N162 312 aa16.44■□□□□ 0.22
GPC1-201ENST00000264039 FSTL5Q8N475 847 aaPredicted RBP16.44■□□□□ 0.22
GPC1-201ENST00000264039 TBC1D15Q8TC07 691 aa16.44■□□□□ 0.22
GPC1-201ENST00000264039 DFFAO00273 331 aa16.43■□□□□ 0.22
GPC1-201ENST00000264039 TSC22D2O75157 780 aa16.43■□□□□ 0.22
GPC1-201ENST00000264039 S100A5P33763 92 aa16.43■□□□□ 0.22
GPC1-201ENST00000264039 UBE2UQ5VVX9 321 aa16.43■□□□□ 0.22
GPC1-201ENST00000264039 SPESP1Q6UW49 350 aa16.43■□□□□ 0.22
GPC1-201ENST00000264039 PDZD4Q76G19 769 aaPredicted RBP16.43■□□□□ 0.22
GPC1-201ENST00000264039 TRPC4APQ8TEL6 797 aa16.43■□□□□ 0.22
GPC1-201ENST00000264039 SEPT8Q92599 483 aa16.43■□□□□ 0.22
GPC1-201ENST00000264039 HPDLQ96IR7 371 aa16.43■□□□□ 0.22
GPC1-201ENST00000264039 PDCD2LQ9BRP1 358 aa16.43■□□□□ 0.22
GPC1-201ENST00000264039 TMEM39BQ9GZU3 492 aa16.43■□□□□ 0.22
GPC1-201ENST00000264039 LRRC4Q9HBW1 653 aa16.43■□□□□ 0.22
GPC1-201ENST00000264039 EML4Q9HC35 981 aaKnown RBP16.43■□□□□ 0.22
GPC1-201ENST00000264039 SCHIP1Q9P0W5 487 aaPredicted RBP16.43■□□□□ 0.22
GPC1-201ENST00000264039 FEM1BQ9UK73 627 aa16.43■□□□□ 0.22
GPC1-201ENST00000264039 CYP4B1P13584 511 aa16.43■□□□□ 0.22
GPC1-201ENST00000264039 KPNA2P52292 529 aaKnown RBP16.43■□□□□ 0.22
GPC1-201ENST00000264039 RPL26P61254 145 aaKnown RBP16.43■□□□□ 0.22
GPC1-201ENST00000264039 RALGPS2Q86X27 583 aaPredicted RBP16.43■□□□□ 0.22
GPC1-201ENST00000264039 PNPLA1Q8N8W4 532 aa16.43■□□□□ 0.22
GPC1-201ENST00000264039 CMASQ8NFW8 434 aaPredicted RBP16.43■□□□□ 0.22
GPC1-201ENST00000264039 FIG4Q92562 907 aa16.43■□□□□ 0.22
GPC1-201ENST00000264039 VTI1BQ9UEU0 232 aa16.43■□□□□ 0.22
GPC1-201ENST00000264039 PCDHGA3Q9Y5H0 932 aa16.43■□□□□ 0.22
GPC1-201ENST00000264039 TJP1Q07157 1748 aa16.43■□□□□ 0.22
GPC1-201ENST00000264039 A0A0A0MRY4 1105 aa16.43■□□□□ 0.22
GPC1-201ENST00000264039 HMX2A2RU54 273 aa16.43■□□□□ 0.22
GPC1-201ENST00000264039 SLCO1B7G3V0H7 640 aa16.43■□□□□ 0.22
GPC1-201ENST00000264039 DPP6P42658 865 aa16.43■□□□□ 0.22
GPC1-201ENST00000264039 STYK1Q6J9G0 422 aa16.43■□□□□ 0.22
GPC1-201ENST00000264039 RAB44Q7Z6P3 723 aaPredicted RBP16.43■□□□□ 0.22
GPC1-201ENST00000264039 GMCL1P1Q8NEA9 526 aa16.43■□□□□ 0.22
GPC1-201ENST00000264039 NDRG1Q92597 394 aaKnown RBP16.43■□□□□ 0.22
GPC1-201ENST00000264039 SPATA13Q96N96 652 aa16.43■□□□□ 0.22
GPC1-201ENST00000264039 NEURL2Q9BR09 285 aa16.43■□□□□ 0.22
GPC1-201ENST00000264039 TPK1Q9H3S4 243 aa16.43■□□□□ 0.22
GPC1-201ENST00000264039 TLL2Q9Y6L7 1015 aa16.43■□□□□ 0.22
GPC1-201ENST00000264039 NOBOXO60393 691 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 CAPN1P07384 714 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 HSMCR30P0CW71 290 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 TUBA4AP68366 448 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 APOFQ13790 326 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 CCDC85BQ15834 202 aaPredicted RBP16.42■□□□□ 0.22
GPC1-201ENST00000264039 TMEM236Q5W0B7 351 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 FAM110BQ8TC76 370 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 CRYGNQ8WXF5 182 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 P2RY11Q96G91 374 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 NAT9Q9BTE0 207 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 TBCDQ9BTW9 1192 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 THUMPD3Q9BV44 507 aaKnown RBP16.42■□□□□ 0.22
GPC1-201ENST00000264039 ZBTB26Q9HCK0 441 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 EXOSC4Q9NPD3 245 aaKnown RBP16.42■□□□□ 0.22
GPC1-201ENST00000264039 TEKT2Q9UIF3 430 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 AKT3Q9Y243 479 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 GOLGB1Q14789 3259 aaKnown RBP16.42■□□□□ 0.22
GPC1-201ENST00000264039 AP1G1O43747 822 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 KCNK10P57789 538 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 TUBB3Q13509 450 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 ZNF280DQ6N043 979 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 HHIPL2Q6UWX4 724 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 C8orf59Q8N0T1 100 aaPredicted RBP16.42■□□□□ 0.22
GPC1-201ENST00000264039 IRGQQ8WZA9 623 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 MUS81Q96NY9 551 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 ENTPD7Q9NQZ7 604 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms