RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 RAP1GAP2Q684P5 730 aa18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 ZNF470Q6ECI4 717 aa18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 ZNF280DQ6N043 979 aa18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 MSANTD2Q6P1R3 559 aa18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 ZNF354CQ86Y25 554 aa18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 CNTN4Q8IWV2 1026 aa18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 GIMAP7Q8NHV1 300 aa18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 FUBP3Q96I24 572 aaKnown RBP eCLIP18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 C1orf74Q96LT6 269 aa18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 THTPAQ9BU02 230 aa18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 FBXO44Q9H4M3 255 aa18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 ENTPD7Q9NQZ7 604 aa18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 OXSMQ9NWU1 459 aa18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 MARCH5Q9NX47 278 aa18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 RUVBL2Q9Y230 463 aaKnown RBP18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 GJB3O75712 270 aa18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 GALTP07902 379 aa18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 DNAJB2P25686 324 aa18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 CD86P42081 329 aa18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 PTDSS1P48651 473 aaKnown RBP18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 NRG1Q02297 640 aaPredicted RBP18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 KDELC1Q6UW63 502 aa18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 RSPO2Q6UXX9 243 aaPredicted RBP18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 TMEM173Q86WV6 379 aaPredicted RBP18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 KIRREL3Q8IZU9 778 aa18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 FBXO32Q969P5 355 aa18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 PSMG2Q969U7 264 aa18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 MYEOVQ96EZ4 313 aa18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 SCYL1Q96KG9 808 aa18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 PPP1R36Q96LQ0 422 aa18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 CDH19Q9H159 772 aa18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 MMADHCQ9H3L0 296 aaPredicted RBP18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 TREX1Q9NSU2 369 aa18.91■□□□□ 0.62
PDLIM4-201ENST00000253754 FAM95CA0A1B0GW59 222 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 SYN3O14994 580 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 NCF2P19878 526 aaPredicted RBP18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 MPSTP25325 297 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 SLC25A3Q00325 362 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 DSC2Q02487 901 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 DLG1Q12959 904 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 PEX6Q13608 980 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 THOC5Q13769 683 aaKnown RBP18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 RASIP1Q5U651 963 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 POTEHQ6S545 545 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 PHTF2Q8N3S3 785 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 GPATCH11Q8N954 259 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 DTX3LQ8TDB6 740 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 SEPT5Q99719 369 aaPredicted RBP18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 TMEM106CQ9BVX2 250 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 ZYG11BQ9C0D3 744 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 STN1Q9H668 368 aaKnown RBP18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 DCLRE1BQ9H816 532 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 NSMCE4AQ9NXX6 385 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 WASH4PA8MWX3 477 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 E9PBE3 544 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 KLHL41O60662 606 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 ATP5BP06576 529 aaKnown RBP18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 CSF2RAP15509 400 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 CPOXP36551 454 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 CCNG1P51959 295 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 TAF10Q12962 218 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 TBCCQ15814 346 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 ZNF789Q5FWF6 425 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 FBXL22Q6P050 247 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 NECAB2Q7Z6G3 386 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 TMCO2Q7Z6W1 182 aaPredicted RBP18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 ULK2Q8IYT8 1036 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 UMODL1-AS1Q8N2C9 162 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 LRRC43Q8N309 656 aa18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 FSTL5Q8N475 847 aaPredicted RBP18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 TDRD5Q8NAT2 981 aaKnown RBP18.9■□□□□ 0.62
PDLIM4-201ENST00000253754 TRIM43BA6NCK2 446 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 CCL22O00626 93 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 CPB1P15086 417 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 RHOQP17081 205 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 YWHAQP27348 245 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 CDC25CP30307 473 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 ELF1P32519 619 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 GRIA4P48058 902 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 SLC12A1Q13621 1099 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 C10orf120Q5SQS8 335 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 FUT10Q6P4F1 479 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 ZYG11AQ6WRX3 759 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 TRIM43Q96BQ3 446 aaPredicted RBP18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 NXNL1Q96CM4 212 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 ELMO2Q96JJ3 720 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 MYCBPQ99417 103 aaPredicted RBP18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 XPR1Q9UBH6 696 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 MAGEC1O60732 1142 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 VNN2O95498 520 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 CD1EP15812 388 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 ETFBP38117 255 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 RAP1GDS1P52306 607 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 MGAT5BQ3V5L5 792 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 CFAP157Q5JU67 520 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 FAM117BQ6P1L5 589 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 SCUBE1Q8IWY4 988 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 IMP4Q96G21 291 aaKnown RBP18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 RSRC1Q96IZ7 334 aaKnown RBP18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 OR52B2Q96RD2 323 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms