RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 SETMARQ53H47 684 aaPredicted RBP24.67■■□□□ 1.54
SDF2L1-201ENST00000248958 NCBP2-AS2Q69YL0 99 aa24.67■■□□□ 1.54
SDF2L1-201ENST00000248958 ARHGAP36Q6ZRI8 547 aa24.67■■□□□ 1.54
SDF2L1-201ENST00000248958 PARS2Q7L3T8 475 aaKnown RBP24.67■■□□□ 1.54
SDF2L1-201ENST00000248958 TXLNBQ8N3L3 684 aa24.67■■□□□ 1.54
SDF2L1-201ENST00000248958 NETO2Q8NC67 525 aa24.67■■□□□ 1.54
SDF2L1-201ENST00000248958 PCDH19Q8TAB3 1148 aa24.67■■□□□ 1.54
SDF2L1-201ENST00000248958 KLHL32Q96NJ5 620 aa24.67■■□□□ 1.54
SDF2L1-201ENST00000248958 TUBGCP5Q96RT8 1024 aa24.67■■□□□ 1.54
SDF2L1-201ENST00000248958 KLHL11Q9NVR0 708 aa24.67■■□□□ 1.54
SDF2L1-201ENST00000248958 DKK3Q9UBP4 350 aa24.67■■□□□ 1.54
SDF2L1-201ENST00000248958 CACNA1EQ15878 2313 aa24.67■■□□□ 1.54
SDF2L1-201ENST00000248958 LRRD1A4D1F6 860 aa24.66■■□□□ 1.54
SDF2L1-201ENST00000248958 TM4SF5O14894 197 aa24.66■■□□□ 1.54
SDF2L1-201ENST00000248958 MAFKO60675 156 aa24.66■■□□□ 1.54
SDF2L1-201ENST00000248958 OPHN1O60890 802 aa24.66■■□□□ 1.54
SDF2L1-201ENST00000248958 COMTP21964 271 aa24.66■■□□□ 1.54
SDF2L1-201ENST00000248958 SUOXP51687 545 aa24.66■■□□□ 1.54
SDF2L1-201ENST00000248958 NAPEPLDQ6IQ20 393 aa24.66■■□□□ 1.54
SDF2L1-201ENST00000248958 KIAA1161Q6NSJ0 714 aa24.66■■□□□ 1.54
SDF2L1-201ENST00000248958 RAD9BQ6WBX8 426 aa24.66■■□□□ 1.54
SDF2L1-201ENST00000248958 ERMP1Q7Z2K6 904 aa24.66■■□□□ 1.54
SDF2L1-201ENST00000248958 DGLUCYQ7Z3D6 616 aa24.66■■□□□ 1.54
SDF2L1-201ENST00000248958 ADAT2Q7Z6V5 191 aaKnown RBP24.66■■□□□ 1.54
SDF2L1-201ENST00000248958 TP53INP2Q8IXH6 220 aa24.66■■□□□ 1.54
SDF2L1-201ENST00000248958 MINDY1Q8N5J2 469 aa24.66■■□□□ 1.54
SDF2L1-201ENST00000248958 SPC24Q8NBT2 197 aa24.66■■□□□ 1.54
SDF2L1-201ENST00000248958 FEM1CQ96JP0 617 aa24.66■■□□□ 1.54
SDF2L1-201ENST00000248958 ZNF641Q96N77 438 aaPredicted RBP24.66■■□□□ 1.54
SDF2L1-201ENST00000248958 PSKH2Q96QS6 385 aa24.66■■□□□ 1.54
SDF2L1-201ENST00000248958 EBF2Q9HAK2 575 aa24.66■■□□□ 1.54
SDF2L1-201ENST00000248958 FSCN3Q9NQT6 498 aa24.66■■□□□ 1.54
SDF2L1-201ENST00000248958 DNAAF2Q9NVR5 837 aaKnown RBP24.66■■□□□ 1.54
SDF2L1-201ENST00000248958 SHROOM3Q8TF72 1996 aa24.65■■□□□ 1.54
SDF2L1-201ENST00000248958 BTNL10A8MVZ5 291 aa24.65■■□□□ 1.54
SDF2L1-201ENST00000248958 VILLO15195 856 aa24.65■■□□□ 1.54
SDF2L1-201ENST00000248958 TSPAN6O43657 245 aa24.65■■□□□ 1.54
SDF2L1-201ENST00000248958 PCDH8O95206 1070 aa24.65■■□□□ 1.54
SDF2L1-201ENST00000248958 CER1O95813 267 aa24.65■■□□□ 1.54
SDF2L1-201ENST00000248958 CSNK1EP49674 416 aaKnown RBP24.65■■□□□ 1.54
SDF2L1-201ENST00000248958 TIGD7Q6NT04 549 aaPredicted RBP24.65■■□□□ 1.54
SDF2L1-201ENST00000248958 C11orf63Q6NUN7 778 aa24.65■■□□□ 1.54
SDF2L1-201ENST00000248958 SRLQ86TD4 932 aa24.65■■□□□ 1.54
SDF2L1-201ENST00000248958 HORMAD1Q86X24 394 aa24.65■■□□□ 1.54
SDF2L1-201ENST00000248958 TSEN2Q8NCE0 465 aaKnown RBP24.65■■□□□ 1.54
SDF2L1-201ENST00000248958 RAPGEF5Q92565 580 aa24.65■■□□□ 1.54
SDF2L1-201ENST00000248958 VOPP1Q96AW1 172 aa24.65■■□□□ 1.54
SDF2L1-201ENST00000248958 SERAC1Q96JX3 654 aa24.65■■□□□ 1.54
SDF2L1-201ENST00000248958 EXOC2Q96KP1 924 aa24.65■■□□□ 1.54
SDF2L1-201ENST00000248958 RNF157Q96PX1 679 aa24.65■■□□□ 1.54
SDF2L1-201ENST00000248958 MAK16Q9BXY0 300 aaKnown RBP24.65■■□□□ 1.54
SDF2L1-201ENST00000248958 FADS3Q9Y5Q0 445 aa24.65■■□□□ 1.54
SDF2L1-201ENST00000248958 ALG6Q9Y672 507 aa24.65■■□□□ 1.54
SDF2L1-201ENST00000248958 A0A1W2PQU0 124 aa24.64■■□□□ 1.54
SDF2L1-201ENST00000248958 PRAMEF26H0Y7S4 382 aa24.64■■□□□ 1.54
SDF2L1-201ENST00000248958 PSTPIP1O43586 416 aa24.64■■□□□ 1.54
SDF2L1-201ENST00000248958 MFSD11O43934 449 aa24.64■■□□□ 1.54
SDF2L1-201ENST00000248958 BUB1BO60566 1050 aaPredicted RBP24.64■■□□□ 1.54
SDF2L1-201ENST00000248958 MX2P20592 715 aa24.64■■□□□ 1.54
SDF2L1-201ENST00000248958 CD38P28907 300 aa24.64■■□□□ 1.54
SDF2L1-201ENST00000248958 GSDMDP57764 484 aa24.64■■□□□ 1.54
SDF2L1-201ENST00000248958 RPS21P63220 83 aaKnown RBP24.64■■□□□ 1.54
SDF2L1-201ENST00000248958 GALNT2Q10471 571 aa24.64■■□□□ 1.54
SDF2L1-201ENST00000248958 SLC14A1Q13336 389 aa24.64■■□□□ 1.54
SDF2L1-201ENST00000248958 ZNF235Q14590 738 aa24.64■■□□□ 1.54
SDF2L1-201ENST00000248958 IFI16Q16666 785 aaKnown RBP24.64■■□□□ 1.54
SDF2L1-201ENST00000248958 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.64■■□□□ 1.54
SDF2L1-201ENST00000248958 SLC6A18Q96N87 628 aa24.64■■□□□ 1.54
SDF2L1-201ENST00000248958 SUV39H2Q9H5I1 410 aa24.64■■□□□ 1.54
SDF2L1-201ENST00000248958 AASDHPPTQ9NRN7 309 aa24.64■■□□□ 1.54
SDF2L1-201ENST00000248958 ANKRD6Q9Y2G4 727 aa24.64■■□□□ 1.54
SDF2L1-201ENST00000248958 SLCO1B1Q9Y6L6 691 aa24.64■■□□□ 1.54
SDF2L1-201ENST00000248958 ANKRD36A6QL64 1941 aa24.64■■□□□ 1.53
SDF2L1-201ENST00000248958 A0A1B0GVT2 93 aa24.63■■□□□ 1.53
SDF2L1-201ENST00000248958 INSIG1O15503 277 aa24.63■■□□□ 1.53
SDF2L1-201ENST00000248958 MAGEC1O60732 1142 aa24.63■■□□□ 1.53
SDF2L1-201ENST00000248958 KRT1P04264 644 aa24.63■■□□□ 1.53
SDF2L1-201ENST00000248958 ZFXP17010 805 aaPredicted RBP24.63■■□□□ 1.53
SDF2L1-201ENST00000248958 SERPINA4P29622 427 aa24.63■■□□□ 1.53
SDF2L1-201ENST00000248958 MAT2AP31153 395 aaKnown RBP24.63■■□□□ 1.53
SDF2L1-201ENST00000248958 GARSP41250 739 aaKnown RBP24.63■■□□□ 1.53
SDF2L1-201ENST00000248958 VAV2P52735 878 aa24.63■■□□□ 1.53
SDF2L1-201ENST00000248958 C21orf59P57076 290 aa24.63■■□□□ 1.53
SDF2L1-201ENST00000248958 AP1S1P61966 158 aa24.63■■□□□ 1.53
SDF2L1-201ENST00000248958 SLC10A7Q0GE19 358 aa24.63■■□□□ 1.53
SDF2L1-201ENST00000248958 OVGP1Q12889 678 aa24.63■■□□□ 1.53
SDF2L1-201ENST00000248958 UAP1L1Q3KQV9 507 aa24.63■■□□□ 1.53
SDF2L1-201ENST00000248958 MARC1Q5VT66 337 aa24.63■■□□□ 1.53
SDF2L1-201ENST00000248958 TTC7BQ86TV6 843 aa24.63■■□□□ 1.53
SDF2L1-201ENST00000248958 TMEM139Q8IV31 216 aa24.63■■□□□ 1.53
SDF2L1-201ENST00000248958 FATE1Q969F0 183 aa24.63■■□□□ 1.53
SDF2L1-201ENST00000248958 ATP13A3Q9H7F0 1226 aa24.63■■□□□ 1.53
SDF2L1-201ENST00000248958 HAUS2Q9NVX0 235 aa24.63■■□□□ 1.53
SDF2L1-201ENST00000248958 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.63■■□□□ 1.534e-7■□□□□ 9.1
SDF2L1-201ENST00000248958 CEP250Q9BV73 2442 aa24.63■■□□□ 1.53
SDF2L1-201ENST00000248958 TSPAN11A1L157 253 aa24.62■■□□□ 1.53
SDF2L1-201ENST00000248958 PJA2O43164 708 aa24.62■■□□□ 1.53
SDF2L1-201ENST00000248958 PEX11BO96011 259 aa24.62■■□□□ 1.53
SDF2L1-201ENST00000248958 ZNF883P0CG24 379 aa24.62■■□□□ 1.53
SDF2L1-201ENST00000248958 CCNCP24863 283 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms