RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 MAP7D3Q8IWC1 876 aa12.95□□□□□ -0.34
VPREB3-201ENST00000248948 ATPAF2Q8N5M1 289 aa12.95□□□□□ -0.34
VPREB3-201ENST00000248948 PSKH2Q96QS6 385 aa12.95□□□□□ -0.34
VPREB3-201ENST00000248948 CALN1Q9BXU9 219 aa12.95□□□□□ -0.34
VPREB3-201ENST00000248948 CPEB1Q9BZB8 566 aaKnown RBP12.95□□□□□ -0.34
VPREB3-201ENST00000248948 DKK3Q9UBP4 350 aa12.95□□□□□ -0.34
VPREB3-201ENST00000248948 IPO11Q9UI26 975 aaKnown RBP12.95□□□□□ -0.34
VPREB3-201ENST00000248948 A0A0A6YYK5 440 aaPredicted RBP12.94□□□□□ -0.34
VPREB3-201ENST00000248948 A0A1B0GVT2 93 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 A0A1W2PQU0 124 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 DCDC2BA2VCK2 349 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 PRAMEF26H0Y7S4 382 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 MFSD11O43934 449 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 DFNA5O60443 496 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 PALMO75781 387 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 CD48P09326 243 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 AMPD1P23109 780 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 IL4RP24394 825 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 CD38P28907 300 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 RENBPP51606 427 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 BNC1Q01954 994 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 OVGP1Q12889 678 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 PAFAH1B3Q15102 231 aaKnown RBP12.94□□□□□ -0.34
VPREB3-201ENST00000248948 SPA17Q15506 151 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 TMEM259Q4ZIN3 620 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 PPM1JQ5JR12 505 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 NCBP2-AS2Q69YL0 99 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 CPNE8Q86YQ8 564 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 TMTC1Q8IUR5 882 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 KCTD6Q8NC69 237 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 HCAR2Q8TDS4 363 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 SERAC1Q96JX3 654 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 EXOC2Q96KP1 924 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 ZNF641Q96N77 438 aaPredicted RBP12.94□□□□□ -0.34
VPREB3-201ENST00000248948 EBF2Q9HAK2 575 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 AASDHPPTQ9NRN7 309 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 ETNK2Q9NVF9 386 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 IMPACTQ9P2X3 320 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 SEPT3Q9UH03 358 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 PCDHGB2Q9Y5G2 931 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 FADS3Q9Y5Q0 445 aa12.94□□□□□ -0.34
VPREB3-201ENST00000248948 SPTBN2O15020 2390 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 NCOR2Q9Y618 2525 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 A0A1W2PR77 199 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 C16orf96A6NNT2 1141 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 TMEM110-MUSTN1A8MSY1 372 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 TSPAN6O43657 245 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 MAFKO60675 156 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 MAGEC1O60732 1142 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 NDUFA10O95299 355 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 PEX11BO96011 259 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 HNRNPA2B1P22626 353 aaKnown RBP12.93□□□□□ -0.34
VPREB3-201ENST00000248948 SERPINA4P29622 427 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 GKP32189 559 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 ABL2P42684 1182 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 CTSKP43235 329 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 MAGEA1P43355 309 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 CSNK1EP49674 416 aaKnown RBP12.93□□□□□ -0.34
VPREB3-201ENST00000248948 C21orf59P57076 290 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 AP1S1P61966 158 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 RPS21P63220 83 aaKnown RBP12.93□□□□□ -0.34
VPREB3-201ENST00000248948 NSUN2Q08J23 767 aaKnown RBP eCLIP12.93□□□□□ -0.34
VPREB3-201ENST00000248948 GALNT2Q10471 571 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 HNRNPDQ14103 355 aaKnown RBP12.93□□□□□ -0.34
VPREB3-201ENST00000248948 ZNF235Q14590 738 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 LBRQ14739 615 aaKnown RBP12.93□□□□□ -0.34
VPREB3-201ENST00000248948 ZNF423Q2M1K9 1284 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 KIF19Q2TAC6 998 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 ZNF284Q2VY69 593 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 UAP1L1Q3KQV9 507 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 ANKRD20A8PQ5CZ79 823 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 C11orf63Q6NUN7 778 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 BRAT1Q6PJG6 821 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 ARHGAP36Q6ZRI8 547 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 PIP4P1Q86T03 277 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 BBS5Q8N3I7 341 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 OXR1Q8N573 874 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 MFSD2AQ8NA29 543 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 TMEM145Q8NBT3 493 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 PCDH19Q8TAB3 1148 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 FAM174AQ8TBP5 190 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 NSMCE1Q8WV22 266 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 FATE1Q969F0 183 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 CALR3Q96L12 384 aaKnown RBP12.93□□□□□ -0.34
VPREB3-201ENST00000248948 KLHL32Q96NJ5 620 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 SLC32A1Q9H598 525 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 GAREM1Q9H706 876 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 ATP13A3Q9H7F0 1226 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 KLHL11Q9NVR0 708 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 ANKRD6Q9Y2G4 727 aa12.93□□□□□ -0.34
VPREB3-201ENST00000248948 LRP4O75096 1905 aa12.92□□□□□ -0.34
VPREB3-201ENST00000248948 GOLGA6L6A8MZA4 724 aa12.92□□□□□ -0.34
VPREB3-201ENST00000248948 AREL1O15033 823 aa12.92□□□□□ -0.34
VPREB3-201ENST00000248948 YKT6O15498 198 aa12.92□□□□□ -0.34
VPREB3-201ENST00000248948 SPINT1O43278 529 aa12.92□□□□□ -0.34
VPREB3-201ENST00000248948 PSTPIP1O43586 416 aa12.92□□□□□ -0.34
VPREB3-201ENST00000248948 PCDH8O95206 1070 aa12.92□□□□□ -0.34
VPREB3-201ENST00000248948 CEACAM1P13688 526 aa12.92□□□□□ -0.34
VPREB3-201ENST00000248948 MAT2AP31153 395 aaKnown RBP12.92□□□□□ -0.34
VPREB3-201ENST00000248948 AKT2P31751 481 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms