RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 ANKRD22Q5VYY1 191 aa20.03■□□□□ 0.8
SOX4-201ENST00000244745 STAG3L4Q8TBR4 150 aa20.03■□□□□ 0.8
SOX4-201ENST00000244745 MPSTP25325 297 aa20.03■□□□□ 0.8
SOX4-201ENST00000244745 FAM171A1Q5VUB5 890 aa20.03■□□□□ 0.8
SOX4-201ENST00000244745 SCIMPQ6UWF3 145 aa20.03■□□□□ 0.8
SOX4-201ENST00000244745 APTXQ7Z2E3 356 aaKnown RBP20.03■□□□□ 0.8
SOX4-201ENST00000244745 RBM15BQ8NDT2 890 aaKnown RBP20.03■□□□□ 0.8
SOX4-201ENST00000244745 CERKQ8TCT0 537 aa20.03■□□□□ 0.8
SOX4-201ENST00000244745 CHID1Q9BWS9 393 aa20.03■□□□□ 0.8
SOX4-201ENST00000244745 FAM208AQ9UK61 1670 aaKnown RBP20.03■□□□□ 0.8
SOX4-201ENST00000244745 SEC24AO95486 1093 aa20.03■□□□□ 0.8
SOX4-201ENST00000244745 ERAP2Q6P179 960 aa20.03■□□□□ 0.8
SOX4-201ENST00000244745 ATG14Q6ZNE5 492 aa20.03■□□□□ 0.8
SOX4-201ENST00000244745 FGD2Q7Z6J4 655 aa20.03■□□□□ 0.8
SOX4-201ENST00000244745 C12orf50Q8NA57 414 aaPredicted RBP20.03■□□□□ 0.8
SOX4-201ENST00000244745 POC5Q8NA72 575 aa20.03■□□□□ 0.8
SOX4-201ENST00000244745 CCDC28BQ9BUN5 200 aa20.03■□□□□ 0.8
SOX4-201ENST00000244745 PDGFDQ9GZP0 370 aaPredicted RBP20.03■□□□□ 0.8
SOX4-201ENST00000244745 TCHHQ07283 1943 aa20.03■□□□□ 0.8
SOX4-201ENST00000244745 IFT172Q9UG01 1749 aa20.03■□□□□ 0.8
SOX4-201ENST00000244745 PDE9AO76083 593 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 C4BPAP04003 597 aaKnown RBP20.02■□□□□ 0.8
SOX4-201ENST00000244745 LINC00032P0C843 101 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 RIOX2Q8IUF8 465 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 HSFY1Q96LI6 401 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 MRIQ9BWK5 157 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 KLQ9UEF7 1012 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 PRPF19Q9UMS4 504 aaKnown RBP20.02■□□□□ 0.8
SOX4-201ENST00000244745 PIPSLA2A3N6 862 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 MMP8P22894 467 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 EEF1DP3Q658K8 133 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 SAPCD2Q86UD0 394 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 ADHFE1Q8IWW8 467 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 GAD1Q99259 594 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 GRHL1Q9NZI5 618 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 CHRNB2P17787 502 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 TMEM132BQ14DG7 1078 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 FKBP1CQ5VVH2 108 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 TATDN1Q6P1N9 297 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 GK5Q6ZS86 529 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 ZNF605Q86T29 641 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 SMPD4Q9NXE4 827 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 AJAP1Q9UKB5 411 aaPredicted RBP20.02■□□□□ 0.8
SOX4-201ENST00000244745 EFCAB10A6NFE3 127 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 ALDH2P05091 517 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 TALDO1P37837 337 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 RTP1P59025 263 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 STXBP5Q5T5C0 1151 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 ARMC3Q5W041 872 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 ADGRD1Q6QNK2 874 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 CASP12Q6UXS9 341 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 ZNF572Q7Z3I7 529 aaPredicted RBP20.02■□□□□ 0.8
SOX4-201ENST00000244745 HPS6Q86YV9 775 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 SYT12Q8IV01 421 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 C10orf53Q8N6V4 93 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 PTCD3Q96EY7 689 aaKnown RBP20.02■□□□□ 0.8
SOX4-201ENST00000244745 CPXM1Q96SM3 734 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 FANCEQ9HB96 536 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 LGALS13Q9UHV8 139 aa20.02■□□□□ 0.8
SOX4-201ENST00000244745 CDKN2BP42772 138 aa20.02■□□□□ 0.79
SOX4-201ENST00000244745 EPHB3P54753 998 aa20.02■□□□□ 0.79
SOX4-201ENST00000244745 RAP1GAP2Q684P5 730 aa20.02■□□□□ 0.79
SOX4-201ENST00000244745 PQLC1Q8N2U9 271 aa20.02■□□□□ 0.79
SOX4-201ENST00000244745 TMEM109Q9BVC6 243 aa20.02■□□□□ 0.79
SOX4-201ENST00000244745 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.02■□□□□ 0.79
SOX4-201ENST00000244745 CAPN8A6NHC0 703 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 LHX5Q9H2C1 402 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 WDR55Q9H6Y2 383 aaPredicted RBP20.01■□□□□ 0.79
SOX4-201ENST00000244745 CD3EAPO15446 510 aaKnown RBP20.01■□□□□ 0.79
SOX4-201ENST00000244745 FGD3Q5JSP0 725 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 SIX5Q8N196 739 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 C19orf60Q96EN9 201 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 MCRS1Q96EZ8 462 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 ZFP42Q96MM3 310 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 LOC100506127A0A0U1RQW1 187 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 ATP6AP2A0A1C7CYW4 349 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 ATP6AP2O75787 350 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 MTX3Q5HYI7 312 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 CERCAMQ5T4B2 595 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 P2RY11Q96G91 374 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 STXBP5LQ9Y2K9 1186 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 OR56A5P0C7T3 313 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 C6orf52Q5T4I8 152 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 SIX2Q9NPC8 291 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 LEF1Q9UJU2 399 aaPredicted RBP20.01■□□□□ 0.79
SOX4-201ENST00000244745 BCL9LQ86UU0 1499 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 SCNN1GP51170 649 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 NPY5RQ15761 445 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 S100ZQ8WXG8 99 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 TCF12Q99081 682 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 CLEC4MQ9H2X3 399 aaPredicted RBP20.01■□□□□ 0.79
SOX4-201ENST00000244745 SERHL2Q9H4I8 314 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 BPIFA1Q9NP55 256 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 SERHLQ9NQF3 203 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 EGFL7Q9UHF1 273 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 CDH22Q9UJ99 828 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 ZNF180Q9UJW8 692 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 SLC12A4Q9UP95 1085 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 BTBD3Q9Y2F9 522 aa20.01■□□□□ 0.79
SOX4-201ENST00000244745 HGFP14210 728 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms