RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 SLC25A41Q8N5S1 370 aa22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 PPP2R3CQ969Q6 453 aa22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 CCDC126Q96EE4 140 aa22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 ZNF419Q96HQ0 510 aaPredicted RBP22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 ELMO2Q96JJ3 720 aa22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 TRPV6Q9H1D0 765 aa22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 ATP13A1Q9HD20 1204 aa22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 XPR1Q9UBH6 696 aa22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 INPP5FQ9Y2H2 1132 aa22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 TRPC5OSA6NMA1 111 aa22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 MSI1O43347 362 aaKnown RBP22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 ATP5F1P24539 256 aaPredicted RBP22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 AVPR1AP37288 418 aa22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 LSMEM2Q8N112 164 aa22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 KYQ8NBH2 561 aa22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 TSPAN17Q96FV3 270 aa22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 FAR2Q96K12 515 aa22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 CYP4F11Q9HBI6 524 aa22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 CLIC5Q9NZA1 410 aa22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 BCAP29Q9UHQ4 241 aa22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 A0A1W2PQH9 124 aa22.21■■□□□ 1.15
SMARCD2-201ENST00000225742 CCDC78A2IDD5 438 aa22.21■■□□□ 1.15
SMARCD2-201ENST00000225742 RHOQP17081 205 aa22.21■■□□□ 1.15
SMARCD2-201ENST00000225742 SP100P23497 879 aaPredicted RBP22.21■■□□□ 1.15
SMARCD2-201ENST00000225742 GLRBP48167 497 aa22.21■■□□□ 1.15
SMARCD2-201ENST00000225742 CLCN5P51795 746 aa22.21■■□□□ 1.15
SMARCD2-201ENST00000225742 WNT3AP56704 352 aa22.21■■□□□ 1.15
SMARCD2-201ENST00000225742 SATB1Q01826 763 aa22.21■■□□□ 1.15
SMARCD2-201ENST00000225742 TNK2Q07912 1038 aa22.21■■□□□ 1.15
SMARCD2-201ENST00000225742 NSUN2Q08J23 767 aaKnown RBP eCLIP22.21■■□□□ 1.15
SMARCD2-201ENST00000225742 CNGA3Q16281 694 aa22.21■■□□□ 1.15
SMARCD2-201ENST00000225742 SH2D4BQ5SQS7 431 aa22.21■■□□□ 1.15
SMARCD2-201ENST00000225742 CEP97Q8IW35 865 aa22.21■■□□□ 1.15
SMARCD2-201ENST00000225742 MFSD6LQ8IWD5 586 aa22.21■■□□□ 1.15
SMARCD2-201ENST00000225742 SLC26A7Q8TE54 656 aa22.21■■□□□ 1.15
SMARCD2-201ENST00000225742 HASPINQ8TF76 798 aa22.21■■□□□ 1.15
SMARCD2-201ENST00000225742 NXNL1Q96CM4 212 aa22.21■■□□□ 1.15
SMARCD2-201ENST00000225742 SLC39A13Q96H72 371 aa22.21■■□□□ 1.15
SMARCD2-201ENST00000225742 FUBP3Q96I24 572 aaKnown RBP eCLIP22.21■■□□□ 1.15
SMARCD2-201ENST00000225742 C8orf48Q96LL4 319 aa22.21■■□□□ 1.15
SMARCD2-201ENST00000225742 ZCWPW1Q9H0M4 648 aa22.21■■□□□ 1.15
SMARCD2-201ENST00000225742 FBXO44Q9H4M3 255 aa22.21■■□□□ 1.15
SMARCD2-201ENST00000225742 NMUR1Q9HB89 426 aa22.21■■□□□ 1.15
SMARCD2-201ENST00000225742 NCKIPSDQ9NZQ3 722 aa22.21■■□□□ 1.15
SMARCD2-201ENST00000225742 ZDHHC2Q9UIJ5 367 aa22.21■■□□□ 1.15
SMARCD2-201ENST00000225742 MYO16Q9Y6X6 1858 aa22.21■■□□□ 1.15
SMARCD2-201ENST00000225742 MYLKQ15746 1914 aa22.21■■□□□ 1.15
SMARCD2-201ENST00000225742 PLXNA3P51805 1871 aa22.2■■□□□ 1.15
SMARCD2-201ENST00000225742 SEPT4O43236 478 aa22.2■■□□□ 1.14
SMARCD2-201ENST00000225742 PDE5AO76074 875 aa22.2■■□□□ 1.14
SMARCD2-201ENST00000225742 TAS2R39P59534 338 aa22.2■■□□□ 1.14
SMARCD2-201ENST00000225742 CYLC2Q14093 348 aaPredicted RBP22.2■■□□□ 1.14
SMARCD2-201ENST00000225742 ZNF470Q6ECI4 717 aa22.2■■□□□ 1.14
SMARCD2-201ENST00000225742 C14orf80Q86SX3 495 aa22.2■■□□□ 1.14
SMARCD2-201ENST00000225742 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.2■■□□□ 1.14
SMARCD2-201ENST00000225742 UCMAQ8WVF2 138 aa22.2■■□□□ 1.14
SMARCD2-201ENST00000225742 IMP4Q96G21 291 aaKnown RBP22.2■■□□□ 1.14
SMARCD2-201ENST00000225742 FTHL17Q9BXU8 183 aa22.2■■□□□ 1.14
SMARCD2-201ENST00000225742 SHCBP1LQ9BZQ2 653 aa22.2■■□□□ 1.14
SMARCD2-201ENST00000225742 PDP2Q9P2J9 529 aa22.2■■□□□ 1.14
SMARCD2-201ENST00000225742 STK39Q9UEW8 545 aa22.2■■□□□ 1.14
SMARCD2-201ENST00000225742 SLC2A6Q9UGQ3 507 aa22.2■■□□□ 1.14
SMARCD2-201ENST00000225742 TMEM189-UBE2V1I3L0A0 370 aa22.2■■□□□ 1.14
SMARCD2-201ENST00000225742 CDC16Q13042 620 aa22.2■■□□□ 1.14
SMARCD2-201ENST00000225742 NFE2Q16621 373 aaPredicted RBP22.2■■□□□ 1.14
SMARCD2-201ENST00000225742 ACBD5Q5T8D3 534 aaPredicted RBP22.2■■□□□ 1.14
SMARCD2-201ENST00000225742 AFAP1L2Q8N4X5 818 aa22.2■■□□□ 1.14
SMARCD2-201ENST00000225742 WDR55Q9H6Y2 383 aaPredicted RBP22.2■■□□□ 1.14
SMARCD2-201ENST00000225742 PRDM5Q9NQX1 630 aaPredicted RBP22.2■■□□□ 1.14
SMARCD2-201ENST00000225742 NDFIP2Q9NV92 336 aa22.2■■□□□ 1.14
SMARCD2-201ENST00000225742 PEX1O43933 1283 aa22.19■■□□□ 1.14
SMARCD2-201ENST00000225742 ADAMTS4O75173 837 aa22.19■■□□□ 1.14
SMARCD2-201ENST00000225742 OAZ2O95190 189 aa22.19■■□□□ 1.14
SMARCD2-201ENST00000225742 PEX11BO96011 259 aa22.19■■□□□ 1.14
SMARCD2-201ENST00000225742 CPB1P15086 417 aa22.19■■□□□ 1.14
SMARCD2-201ENST00000225742 YY1P25490 414 aa22.19■■□□□ 1.14
SMARCD2-201ENST00000225742 LEPRP48357 1165 aaKnown RBP22.19■■□□□ 1.14
SMARCD2-201ENST00000225742 SERPINH1P50454 418 aaKnown RBP22.19■■□□□ 1.14
SMARCD2-201ENST00000225742 DLG1Q12959 904 aa22.19■■□□□ 1.14
SMARCD2-201ENST00000225742 SEPT6Q14141 434 aa22.19■■□□□ 1.14
SMARCD2-201ENST00000225742 RFTN1Q14699 578 aaPredicted RBP22.19■■□□□ 1.14
SMARCD2-201ENST00000225742 FAM83EQ2M2I3 478 aa22.19■■□□□ 1.14
SMARCD2-201ENST00000225742 TSTD2Q5T7W7 516 aa22.19■■□□□ 1.14
SMARCD2-201ENST00000225742 KBTBD6Q86V97 674 aa22.19■■□□□ 1.14
SMARCD2-201ENST00000225742 SNX32Q86XE0 403 aa22.19■■□□□ 1.14
SMARCD2-201ENST00000225742 NUP93Q8N1F7 819 aa22.19■■□□□ 1.14
SMARCD2-201ENST00000225742 AGR3Q8TD06 166 aa22.19■■□□□ 1.14
SMARCD2-201ENST00000225742 PYDC1Q8WXC3 89 aa22.19■■□□□ 1.14
SMARCD2-201ENST00000225742 KLHL4Q9C0H6 718 aa22.19■■□□□ 1.14
SMARCD2-201ENST00000225742 TMEM248Q9NWD8 314 aa22.19■■□□□ 1.14
SMARCD2-201ENST00000225742 DLGAP2Q9P1A6 1054 aa22.19■■□□□ 1.14
SMARCD2-201ENST00000225742 CASQ2O14958 399 aaPredicted RBP22.18■■□□□ 1.14
SMARCD2-201ENST00000225742 TADA2AO75478 443 aa22.18■■□□□ 1.14
SMARCD2-201ENST00000225742 ITGB1P05556 798 aa22.18■■□□□ 1.14
SMARCD2-201ENST00000225742 RBP1P09455 135 aa22.18■■□□□ 1.14
SMARCD2-201ENST00000225742 EPHA3P29320 983 aa22.18■■□□□ 1.14
SMARCD2-201ENST00000225742 TBX4P57082 545 aa22.18■■□□□ 1.14
SMARCD2-201ENST00000225742 SLC14A2Q15849 920 aa22.18■■□□□ 1.14
SMARCD2-201ENST00000225742 AGAP9Q5VTM2 703 aa22.18■■□□□ 1.14
SMARCD2-201ENST00000225742 PDSS2Q86YH6 399 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms