RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 VASPP50552 380 aaPredicted RBP16.65■□□□□ 0.26
LIM2-201ENST00000221973 RENBPP51606 427 aa16.65■□□□□ 0.26
LIM2-201ENST00000221973 IFI35P80217 286 aaPredicted RBP16.65■□□□□ 0.26
LIM2-201ENST00000221973 CREB5Q02930 508 aa16.65■□□□□ 0.26
LIM2-201ENST00000221973 ZBTB17Q13105 803 aa16.65■□□□□ 0.26
LIM2-201ENST00000221973 TUBB2AQ13885 445 aa16.65■□□□□ 0.26
LIM2-201ENST00000221973 HNRNPDQ14103 355 aaKnown RBP16.65■□□□□ 0.26
LIM2-201ENST00000221973 ZNF235Q14590 738 aa16.65■□□□□ 0.26
LIM2-201ENST00000221973 OASLQ15646 514 aaKnown RBP16.65■□□□□ 0.26
LIM2-201ENST00000221973 CYP1B1Q16678 543 aa16.65■□□□□ 0.26
LIM2-201ENST00000221973 WHAMMP3Q1A5X7 153 aa16.65■□□□□ 0.26
LIM2-201ENST00000221973 SDE2Q6IQ49 451 aa16.65■□□□□ 0.26
LIM2-201ENST00000221973 C22orf39Q6P5X5 142 aa16.65■□□□□ 0.26
LIM2-201ENST00000221973 DRICH1Q6PGQ1 229 aaPredicted RBP16.65■□□□□ 0.26
LIM2-201ENST00000221973 TRMT11Q7Z4G4 463 aaKnown RBP16.65■□□□□ 0.26
LIM2-201ENST00000221973 FAM71DQ8N9W8 422 aa16.65■□□□□ 0.26
LIM2-201ENST00000221973 KDM1BQ8NB78 822 aa16.65■□□□□ 0.26
LIM2-201ENST00000221973 TXNDC5Q8NBS9 432 aaKnown RBP16.65■□□□□ 0.26
LIM2-201ENST00000221973 TSEN2Q8NCE0 465 aaKnown RBP16.65■□□□□ 0.26
LIM2-201ENST00000221973 CASKIN2Q8WXE0 1202 aa16.65■□□□□ 0.26
LIM2-201ENST00000221973 ERLEC1Q96DZ1 483 aa16.65■□□□□ 0.26
LIM2-201ENST00000221973 FERMT1Q9BQL6 677 aa16.65■□□□□ 0.26
LIM2-201ENST00000221973 TUBB2BQ9BVA1 445 aa16.65■□□□□ 0.26
LIM2-201ENST00000221973 TM6SF2Q9BZW4 377 aa16.65■□□□□ 0.26
LIM2-201ENST00000221973 TMEM245Q9H330 911 aa16.65■□□□□ 0.26
LIM2-201ENST00000221973 USP29Q9HBJ7 922 aa16.65■□□□□ 0.26
LIM2-201ENST00000221973 NT5MQ9NPB1 228 aa16.65■□□□□ 0.26
LIM2-201ENST00000221973 RBM22Q9NW64 420 aaKnown RBP eCLIP16.65■□□□□ 0.26
LIM2-201ENST00000221973 SEPT3Q9UH03 358 aa16.65■□□□□ 0.26
LIM2-201ENST00000221973 TTLL3Q9Y4R7 772 aa16.65■□□□□ 0.26
LIM2-201ENST00000221973 MRFAP1Q9Y605 127 aa16.65■□□□□ 0.26
LIM2-201ENST00000221973 LNP1A1A4G5 178 aa16.64■□□□□ 0.25
LIM2-201ENST00000221973 RNF103O00237 685 aa16.64■□□□□ 0.25
LIM2-201ENST00000221973 NPC1O15118 1278 aa16.64■□□□□ 0.25
LIM2-201ENST00000221973 MTSS1O43312 755 aa16.64■□□□□ 0.25
LIM2-201ENST00000221973 PHF2O75151 1096 aa16.64■□□□□ 0.25
LIM2-201ENST00000221973 ITGAVP06756 1048 aa16.64■□□□□ 0.25
LIM2-201ENST00000221973 EPHX1P07099 455 aa16.64■□□□□ 0.25
LIM2-201ENST00000221973 PTPN3P26045 913 aa16.64■□□□□ 0.25
LIM2-201ENST00000221973 COILP38432 576 aaPredicted RBP16.64■□□□□ 0.25
LIM2-201ENST00000221973 RHOAP61586 193 aa16.64■□□□□ 0.25
LIM2-201ENST00000221973 CKAP4Q07065 602 aaKnown RBP16.64■□□□□ 0.25
LIM2-201ENST00000221973 WASHC5Q12768 1159 aa16.64■□□□□ 0.25
LIM2-201ENST00000221973 USP39Q53GS9 565 aaKnown RBP16.64■□□□□ 0.25
LIM2-201ENST00000221973 ATXN7L2Q5T6C5 722 aaPredicted RBP16.64■□□□□ 0.25
LIM2-201ENST00000221973 N4BP2L1Q5TBK1 243 aaPredicted RBP16.64■□□□□ 0.25
LIM2-201ENST00000221973 TTC27Q6P3X3 843 aa16.64■□□□□ 0.25
LIM2-201ENST00000221973 Q6ZVU0 165 aa16.64■□□□□ 0.25
LIM2-201ENST00000221973 METTL3Q86U44 580 aaKnown RBP16.64■□□□□ 0.25
LIM2-201ENST00000221973 BBS5Q8N3I7 341 aa16.64■□□□□ 0.25
LIM2-201ENST00000221973 TEX26Q8N6G2 289 aa16.64■□□□□ 0.25
LIM2-201ENST00000221973 FRMD1Q8N878 549 aa16.64■□□□□ 0.25
LIM2-201ENST00000221973 FRS2Q8WU20 508 aa16.64■□□□□ 0.25
LIM2-201ENST00000221973 ZNF419Q96HQ0 510 aaPredicted RBP16.64■□□□□ 0.25
LIM2-201ENST00000221973 EXOC2Q96KP1 924 aa16.64■□□□□ 0.25
LIM2-201ENST00000221973 CCDC114Q96M63 670 aa16.64■□□□□ 0.25
LIM2-201ENST00000221973 AGAP3Q96P47 875 aa16.64■□□□□ 0.25
LIM2-201ENST00000221973 IL12RB2Q99665 862 aa16.64■□□□□ 0.25
LIM2-201ENST00000221973 CEP44Q9C0F1 390 aa16.64■□□□□ 0.25
LIM2-201ENST00000221973 LHX3Q9UBR4 397 aa16.64■□□□□ 0.25
LIM2-201ENST00000221973 NYNRINQ9P2P1 1898 aaKnown RBP16.63■□□□□ 0.25
LIM2-201ENST00000221973 CFAP69A5D8W1 941 aa16.63■□□□□ 0.25
LIM2-201ENST00000221973 PATE3B3GLJ2 98 aa16.63■□□□□ 0.25
LIM2-201ENST00000221973 MUSKO15146 869 aa16.63■□□□□ 0.25
LIM2-201ENST00000221973 ZNF821O75541 412 aaPredicted RBP16.63■□□□□ 0.25
LIM2-201ENST00000221973 KRT37O76014 449 aa16.63■□□□□ 0.25
LIM2-201ENST00000221973 STK10O94804 968 aaKnown RBP16.63■□□□□ 0.25
LIM2-201ENST00000221973 HLA-DQB2P05538 268 aa16.63■□□□□ 0.25
LIM2-201ENST00000221973 PMLP29590 882 aa16.63■□□□□ 0.25
LIM2-201ENST00000221973 P2RY2P41231 377 aa16.63■□□□□ 0.25
LIM2-201ENST00000221973 RGRP47804 291 aa16.63■□□□□ 0.25
LIM2-201ENST00000221973 GDF10P55107 478 aa16.63■□□□□ 0.25
LIM2-201ENST00000221973 MAXP61244 160 aa16.63■□□□□ 0.25
LIM2-201ENST00000221973 ITKQ08881 620 aa16.63■□□□□ 0.25
LIM2-201ENST00000221973 C2orf54Q08AI8 447 aa16.63■□□□□ 0.25
LIM2-201ENST00000221973 ENPP2Q13822 863 aa16.63■□□□□ 0.25
LIM2-201ENST00000221973 HNRNPA1L2Q32P51 320 aaKnown RBP16.63■□□□□ 0.25
LIM2-201ENST00000221973 HSF5Q4G112 596 aaPredicted RBP16.63■□□□□ 0.25
LIM2-201ENST00000221973 CCDC137Q6PK04 289 aaKnown RBP16.63■□□□□ 0.25
LIM2-201ENST00000221973 KLHL7Q8IXQ5 586 aa16.63■□□□□ 0.25
LIM2-201ENST00000221973 PGBD5Q8N414 524 aa16.63■□□□□ 0.25
LIM2-201ENST00000221973 RYBPQ8N488 228 aaPredicted RBP16.63■□□□□ 0.25
LIM2-201ENST00000221973 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.63■□□□□ 0.25
LIM2-201ENST00000221973 PCDH20Q8N6Y1 951 aaKnown RBP16.63■□□□□ 0.25
LIM2-201ENST00000221973 SPATA4Q8NEY3 305 aa16.63■□□□□ 0.25
LIM2-201ENST00000221973 RLN3Q8WXF3 142 aa16.63■□□□□ 0.25
LIM2-201ENST00000221973 PTPRN2Q92932 1015 aa16.63■□□□□ 0.25
LIM2-201ENST00000221973 ISG20Q96AZ6 181 aaKnown RBP16.63■□□□□ 0.25
LIM2-201ENST00000221973 PSKH2Q96QS6 385 aa16.63■□□□□ 0.25
LIM2-201ENST00000221973 DDX47Q9H0S4 455 aaKnown RBP16.63■□□□□ 0.25
LIM2-201ENST00000221973 KLHL8Q9P2G9 620 aaPredicted RBP16.63■□□□□ 0.25
LIM2-201ENST00000221973 SUN2Q9UH99 717 aa16.63■□□□□ 0.25
LIM2-201ENST00000221973 MBD1Q9UIS9 605 aaPredicted RBP16.63■□□□□ 0.25
LIM2-201ENST00000221973 DRG1Q9Y295 367 aaKnown RBP16.63■□□□□ 0.25
LIM2-201ENST00000221973 TNRC6BQ9UPQ9 1833 aaKnown RBP16.63■□□□□ 0.25
LIM2-201ENST00000221973 EDDM13A0A1B0GTR0 161 aa16.62■□□□□ 0.25
LIM2-201ENST00000221973 TTC24A2A3L6 582 aaPredicted RBP16.62■□□□□ 0.25
LIM2-201ENST00000221973 ZBTB24O43167 697 aaPredicted RBP16.62■□□□□ 0.25
LIM2-201ENST00000221973 SIN3BO75182 1162 aa16.62■□□□□ 0.25
LIM2-201ENST00000221973 IFNB1P01574 187 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms