RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 IKQ13123 557 aaPredicted RBP8.01□□□□□ -1.13
VPS11-209ENST00000622309 SP140Q13342 867 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 NAB1Q13506 487 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 LAMC2Q13753 1193 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 GRM4Q14833 912 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 ANO4Q32M45 955 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 BRDTQ58F21 947 aaPredicted RBP8.01□□□□□ -1.13
VPS11-209ENST00000622309 KCNT2Q6UVM3 1135 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 CATSPER4Q7RTX7 472 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 SYTL1Q8IYJ3 562 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 PGAM4Q8N0Y7 254 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 NAT8LQ8N9F0 302 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 LEMD2Q8NC56 503 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 PNPT1Q8TCS8 783 aaKnown RBP8.01□□□□□ -1.13
VPS11-209ENST00000622309 BCL7CQ8WUZ0 217 aaPredicted RBP8.01□□□□□ -1.13
VPS11-209ENST00000622309 AFG1LQ8WV93 481 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 RCN3Q96D15 328 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 HDAC11Q96DB2 347 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 MAGED4Q96JG8 741 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 ADNPQ9H2P0 1102 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 JMJD4Q9H9V9 463 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 PCDH9Q9HC56 1237 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 DCP1AQ9NPI6 582 aaPredicted RBP8.01□□□□□ -1.13
VPS11-209ENST00000622309 MRPL40Q9NQ50 206 aaKnown RBP8.01□□□□□ -1.13
VPS11-209ENST00000622309 ATP6V1HQ9UI12 483 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 VPS28Q9UK41 221 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 CEP350Q5VT06 3117 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 ERVH48-1M5A8F1 160 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 MEN1O00255 615 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 RIMBP2O15034 1052 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 FAM155BO75949 473 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 SERPINB2P05120 415 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 P4HBP07237 508 aaKnown RBP8.01□□□□□ -1.13
VPS11-209ENST00000622309 MYL3P08590 195 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 RALBP11234 206 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 TSHRP16473 764 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 GRIK1P39086 918 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 PTPN9P43378 593 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 QARSP47897 775 aaKnown RBP8.01□□□□□ -1.13
VPS11-209ENST00000622309 EIF6P56537 245 aaKnown RBP8.01□□□□□ -1.13
VPS11-209ENST00000622309 RPL10AP62906 217 aaKnown RBP8.01□□□□□ -1.13
VPS11-209ENST00000622309 C5orf22Q49AR2 442 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 CHSY3Q70JA7 882 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 USP37Q86T82 979 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 MAPKAPK5Q8IW41 473 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 ZNF444Q8N0Y2 327 aaPredicted RBP8.01□□□□□ -1.13
VPS11-209ENST00000622309 DNAJB8Q8NHS0 232 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 TGFBRAP1Q8WUH2 860 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 PBXIP1Q96AQ6 731 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 ZNF778Q96MU6 729 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 IDI2Q9BXS1 227 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 SCPEP1Q9HB40 452 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 RAB20Q9NX57 234 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 ROBO3Q96MS0 1386 aa8□□□□□ -1.13
VPS11-209ENST00000622309 TEX51A0A1B0GUA7 166 aa8□□□□□ -1.13
VPS11-209ENST00000622309 ISPDA4D126 451 aa8□□□□□ -1.13
VPS11-209ENST00000622309 ZBBXA8MT70 800 aa8□□□□□ -1.13
VPS11-209ENST00000622309 PI4K2BG5E9Z4 385 aa8□□□□□ -1.13
VPS11-209ENST00000622309 STX16-NPEPL1H3BU86 382 aa8□□□□□ -1.13
VPS11-209ENST00000622309 TRIM38O00635 465 aa8□□□□□ -1.13
VPS11-209ENST00000622309 SOCS2O14508 198 aa8□□□□□ -1.13
VPS11-209ENST00000622309 PDPK1O15530 556 aa8□□□□□ -1.13
VPS11-209ENST00000622309 ZBTB14O43829 449 aa8□□□□□ -1.13
VPS11-209ENST00000622309 NDUFS2O75306 463 aa8□□□□□ -1.13
VPS11-209ENST00000622309 BCAS1O75363 584 aaPredicted RBP8□□□□□ -1.13
VPS11-209ENST00000622309 SEMA3DO95025 777 aa8□□□□□ -1.13
VPS11-209ENST00000622309 CLIC3O95833 236 aa8□□□□□ -1.13
VPS11-209ENST00000622309 PIK3R1P27986 724 aa8□□□□□ -1.13
VPS11-209ENST00000622309 TM4SF1P30408 202 aa8□□□□□ -1.13
VPS11-209ENST00000622309 RAD51Q06609 339 aa8□□□□□ -1.13
VPS11-209ENST00000622309 BMPR2Q13873 1038 aa8□□□□□ -1.13
VPS11-209ENST00000622309 DGUOKQ16854 277 aa8□□□□□ -1.13
VPS11-209ENST00000622309 NDUFAF5Q5TEU4 345 aa8□□□□□ -1.13
VPS11-209ENST00000622309 ANGEL2Q5VTE6 544 aaKnown RBP8□□□□□ -1.13
VPS11-209ENST00000622309 BROXQ5VW32 411 aa8□□□□□ -1.13
VPS11-209ENST00000622309 ANKRD22Q5VYY1 191 aa8□□□□□ -1.13
VPS11-209ENST00000622309 ARHGEF19Q8IW93 802 aa8□□□□□ -1.13
VPS11-209ENST00000622309 C12orf56Q8IXR9 622 aa8□□□□□ -1.13
VPS11-209ENST00000622309 OFCC1Q8IZS5 231 aa8□□□□□ -1.13
VPS11-209ENST00000622309 SCML4Q8N228 414 aa8□□□□□ -1.13
VPS11-209ENST00000622309 CBR4Q8N4T8 237 aa8□□□□□ -1.13
VPS11-209ENST00000622309 TDRD5Q8NAT2 981 aaKnown RBP8□□□□□ -1.13
VPS11-209ENST00000622309 RDH13Q8NBN7 331 aa8□□□□□ -1.13
VPS11-209ENST00000622309 PSD4Q8NDX1 1056 aa8□□□□□ -1.13
VPS11-209ENST00000622309 MARK4Q96L34 752 aa8□□□□□ -1.13
VPS11-209ENST00000622309 MBOAT7Q96N66 472 aa8□□□□□ -1.13
VPS11-209ENST00000622309 EFCAB1Q9HAE3 211 aa8□□□□□ -1.13
VPS11-209ENST00000622309 PAQR5Q9NXK6 330 aaPredicted RBP8□□□□□ -1.13
VPS11-209ENST00000622309 NUP50Q9UKX7 468 aa8□□□□□ -1.13
VPS11-209ENST00000622309 BCS1LQ9Y276 419 aa8□□□□□ -1.13
VPS11-209ENST00000622309 SNCAIPQ9Y6H5 919 aa8□□□□□ -1.13
VPS11-209ENST00000622309 C6orf229H3BNL8 230 aa8□□□□□ -1.13
VPS11-209ENST00000622309 PSTPIP1O43586 416 aa8□□□□□ -1.13
VPS11-209ENST00000622309 SEC14L2O76054 403 aa8□□□□□ -1.13
VPS11-209ENST00000622309 MBL2P11226 248 aaPredicted RBP8□□□□□ -1.13
VPS11-209ENST00000622309 BMP4P12644 408 aa8□□□□□ -1.13
VPS11-209ENST00000622309 ELK3P41970 407 aa8□□□□□ -1.13
VPS11-209ENST00000622309 ST13P50502 369 aaKnown RBP8□□□□□ -1.13
VPS11-209ENST00000622309 HLCSP50747 726 aa8□□□□□ -1.13
VPS11-209ENST00000622309 AP2S1P53680 142 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms