RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 MIOSQ9NXC5 875 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 PCDHGB4Q9UN71 923 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 PCDHGB5Q9Y5G0 923 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 PLXNB2O15031 1838 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 FAM95CA0A1B0GW59 222 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 NEMP2A6NFY4 417 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 CASTOR2A6NHX0 329 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 PMPCBO75439 489 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 SNUPNO95149 360 aaKnown RBP11.95□□□□□ -0.5
C11orf54-215ENST00000617482 HNRNPLP14866 589 aaKnown RBP eCLIP11.95□□□□□ -0.52e-8■■□□□ 12.7
C11orf54-215ENST00000617482 STMN1P16949 149 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 BDNFP23560 247 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 ARNTP27540 789 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 LHX1P48742 406 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 PSEN2P49810 448 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 CHN2P52757 468 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 PAN2Q504Q3 1202 aaKnown RBP11.95□□□□□ -0.5
C11orf54-215ENST00000617482 SH2D4BQ5SQS7 431 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 TSTD2Q5T7W7 516 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 OLFML2BQ68BL8 750 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 PM20D1Q6GTS8 502 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 DCLRE1AQ6PJP8 1040 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 UGT2A3Q6UWM9 527 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 PLEKHH3Q7Z736 793 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 SATL1Q86VE3 508 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 RNF135Q8IUD6 432 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 ARHGAP18Q8N392 663 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 PNPLA1Q8N8W4 532 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 BRI3BPQ8WY22 251 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 ELMO2Q96JJ3 720 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 GPR78Q96P69 363 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 ZCWPW1Q9H0M4 648 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 ZBTB26Q9HCK0 441 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 NSMCE4AQ9NXX6 385 aa11.95□□□□□ -0.5
C11orf54-215ENST00000617482 C6orf203Q9P0P8 240 aaPredicted RBP11.95□□□□□ -0.5
C11orf54-215ENST00000617482 AAR2Q9Y312 384 aaKnown RBP11.95□□□□□ -0.5
C11orf54-215ENST00000617482 SHROOM3Q8TF72 1996 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 PEX1O43933 1283 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 ZNF189O75820 626 aaPredicted RBP11.94□□□□□ -0.5
C11orf54-215ENST00000617482 ARSAP15289 507 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 EPHX2P34913 555 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 SLC1A2P43004 574 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 NSUN2Q08J23 767 aaKnown RBP eCLIP11.94□□□□□ -0.5
C11orf54-215ENST00000617482 GRM2Q14416 872 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 RBBP5Q15291 538 aaKnown RBP11.94□□□□□ -0.5
C11orf54-215ENST00000617482 C11orf91Q3C1V1 193 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 DENND5AQ6IQ26 1287 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 RPS27LQ71UM5 84 aaKnown RBP11.94□□□□□ -0.5
C11orf54-215ENST00000617482 CPSF7Q8N684 471 aaKnown RBP11.94□□□□□ -0.5
C11orf54-215ENST00000617482 KDM1BQ8NB78 822 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 ZNF385DQ9H6B1 395 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 EFCAB1Q9HAE3 211 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 CHST12Q9NRB3 414 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 VTI1BQ9UEU0 232 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 GNEQ9Y223 722 aaKnown RBP11.94□□□□□ -0.5
C11orf54-215ENST00000617482 COPG1Q9Y678 874 aaKnown RBP11.94□□□□□ -0.5
C11orf54-215ENST00000617482 C15orf38-AP3S2A0A0A6YYH1 394 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 AURKAO14965 403 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 OR6B1O95007 311 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 PMLP29590 882 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 CHRNA4P43681 627 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 ARCN1P48444 511 aaKnown RBP11.94□□□□□ -0.5
C11orf54-215ENST00000617482 TAS2R39P59534 338 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 SEPT6Q14141 434 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 AP1ARQ63HQ0 302 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 ZNF470Q6ECI4 717 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 ARPINQ7Z6K5 226 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 LILRA2Q8N149 483 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 GALNT4Q8N4A0 578 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 ATPAF2Q8N5M1 289 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 TXNDC5Q8NBS9 432 aaKnown RBP11.94□□□□□ -0.5
C11orf54-215ENST00000617482 SCAMP5Q8TAC9 235 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 HEXDCQ8WVB3 486 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 ITFG2Q969R8 447 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 SMARCD1Q96GM5 515 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 BTBD9Q96Q07 612 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 CCDC28BQ9BUN5 200 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 CYP4F12Q9HCS2 524 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 NDFIP2Q9NV92 336 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 GTSE1Q9NYZ3 720 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 UBAP1Q9NZ09 502 aa11.94□□□□□ -0.5
C11orf54-215ENST00000617482 TSC2P49815 1807 aa11.93□□□□□ -0.5
C11orf54-215ENST00000617482 SLCO1B7G3V0H7 640 aa11.93□□□□□ -0.5
C11orf54-215ENST00000617482 AP3B1O00203 1094 aa11.93□□□□□ -0.5
C11orf54-215ENST00000617482 DNAJA2O60884 412 aa11.93□□□□□ -0.5
C11orf54-215ENST00000617482 CAPN15O75808 1086 aa11.93□□□□□ -0.5
C11orf54-215ENST00000617482 THP07101 528 aa11.93□□□□□ -0.5
C11orf54-215ENST00000617482 ME2P23368 584 aa11.93□□□□□ -0.5
C11orf54-215ENST00000617482 RAB27AP51159 221 aa11.93□□□□□ -0.5
C11orf54-215ENST00000617482 COG7P83436 770 aa11.93□□□□□ -0.5
C11orf54-215ENST00000617482 GK3PQ14409 553 aa11.93□□□□□ -0.5
C11orf54-215ENST00000617482 UGP2Q16851 508 aa11.93□□□□□ -0.5
C11orf54-215ENST00000617482 NOMO2Q5JPE7 1267 aa11.93□□□□□ -0.5
C11orf54-215ENST00000617482 FAM219BQ5XKK7 198 aa11.93□□□□□ -0.5
C11orf54-215ENST00000617482 PGAM4Q8N0Y7 254 aa11.93□□□□□ -0.5
C11orf54-215ENST00000617482 DQX1Q8TE96 717 aaKnown RBP11.93□□□□□ -0.5
C11orf54-215ENST00000617482 ZC3H15Q8WU90 426 aaKnown RBP11.93□□□□□ -0.5
C11orf54-215ENST00000617482 MYLPFQ96A32 169 aa11.93□□□□□ -0.5
C11orf54-215ENST00000617482 NDNQ99608 321 aa11.93□□□□□ -0.5
C11orf54-215ENST00000617482 TRPV6Q9H1D0 765 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms