RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 ALOX12P18054 663 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 CCNOP22674 350 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 ILF3Q12906 894 aaKnown RBP eCLIP12.76□□□□□ -0.37
TCF4-248ENST00000616053 SNTA1Q13424 505 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 MLC1Q15049 377 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 ATP13A5Q4VNC0 1218 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 C1orf189Q5VU69 101 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 SLC22A15Q8IZD6 547 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 FAM13CQ8NE31 585 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 TMEM120BA0PK00 339 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 LOC110117498-PIK3R3F6TDL0 507 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 OGTO15294 1046 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 TNFRSF21O75509 655 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 FCGR1AP12314 374 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 FAUP35544 74 aaKnown RBP12.76□□□□□ -0.37
TCF4-248ENST00000616053 FXR2P51116 673 aaKnown RBP eCLIP12.76□□□□□ -0.37
TCF4-248ENST00000616053 HECTD3Q5T447 861 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 MTFR2Q6P444 385 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 STK40Q8N2I9 435 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 TEX47Q8TBZ9 253 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 PIK3R3Q92569 461 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 DNASE1L2Q92874 299 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 MTFR1LQ9H019 292 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 CYP3A43Q9HB55 503 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 ZDHHC4Q9NPG8 344 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 IFT46Q9NQC8 304 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 LRATO95237 230 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 PGK1P00558 417 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 HSF2Q03933 536 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 ETNPPLQ8TBG4 499 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 FEZF2Q8TBJ5 459 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 MPP4Q96JB8 637 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 FNDC11Q9BVV2 318 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 PLGRKTQ9HBL7 147 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 TMEM8AQ9HCN3 771 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 EQTNQ9NQ60 294 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 CATSPERZQ9NTU4 200 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 GRID2IPA4D2P6 1211 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 SMAPO00193 183 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 MEIS2O14770 477 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 PCCBP05166 539 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 BLKP51451 505 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 HK2P52789 917 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 CDH15P55291 814 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 PLGLAQ15195 96 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 ABCA11PQ4W5N1 156 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 FBXO47Q5MNV8 452 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 SATL1Q86VE3 508 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 FAM131BQ86XD5 332 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 PPIL6Q8IXY8 311 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 TEKT5Q96M29 485 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 SLC32A1Q9H598 525 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 GNPTGQ9UJJ9 305 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 ZNF222Q9UK12 451 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 TBC1D24Q9ULP9 559 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 STK36Q9NRP7 1315 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 NEDD8-MDP1E9PL57 170 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 H3BRB1 525 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 NDUFB10O96000 172 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 ALDH4A1P30038 563 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 CASP8Q14790 479 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 WDR93Q6P2C0 686 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 AAGABQ6PD74 315 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 CELF1Q92879 486 aaKnown RBP12.75□□□□□ -0.37
TCF4-248ENST00000616053 ELOVL4Q9GZR5 314 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 REEP1Q9H902 201 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 EXD2Q9NVH0 621 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 IQGAP2Q13576 1575 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 TMEM253P0C7T8 217 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 COL6A1P12109 1028 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 RBMS1P29558 406 aaKnown RBP12.75□□□□□ -0.37
TCF4-248ENST00000616053 SEMA3AQ14563 771 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 NFIXQ14938 502 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 ZDHHC20Q5W0Z9 365 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 XRRA1Q6P2D8 792 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 GPSM1Q86YR5 675 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 FAM126BQ8IXS8 530 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 CADM2Q8N3J6 435 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 SELENOMQ8WWX9 145 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 MCRS1Q96EZ8 462 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 TRPV2Q9Y5S1 764 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 RTCAO00442 366 aaKnown RBP12.75□□□□□ -0.37
TCF4-248ENST00000616053 MPPED1O15442 326 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 NCK2O43639 380 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 GABBR2O75899 941 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 SLC25A14O95258 325 aaPredicted RBP12.75□□□□□ -0.37
TCF4-248ENST00000616053 SLC6A9P48067 706 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 INHBEP58166 350 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 PTPRKQ15262 1439 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 SEZ6Q53EL9 994 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 GPR156Q8NFN8 814 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 ACTRT2Q8TDY3 377 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 NCKIPSDQ9NZQ3 722 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 ATP10AO60312 1499 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 A0A087X0B3 334 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 FAM234BA2RU67 622 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 DCKP27707 260 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 NINJ1Q92982 152 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 TMEM121Q9BTD3 319 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 OSBPL8Q9BZF1 889 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms