RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 GET4Q7L5D6 327 aaPredicted RBP10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 SPPL2CQ8IUH8 684 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 C12orf56Q8IXR9 622 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 DDIASQ8IXT1 998 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 OSCP1Q8WVF1 389 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 DEPDC7Q96QD5 511 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 TDRD1Q9BXT4 1180 aaKnown RBP10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 MUC3BQ9H195 1237 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 GMPR2Q9P2T1 348 aaKnown RBP10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 TLL2Q9Y6L7 1015 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 PRORSD1PA6NEY8 169 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 GSNP06396 782 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 PTPN2P17706 415 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 PSMA4P25789 261 aaKnown RBP10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 PTPN9P43378 593 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 NAMPTP43490 491 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 RARRES1P49788 294 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 GTF2A2P52657 109 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 GTF2BQ00403 316 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 SPCS2Q15005 226 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 DLG2Q15700 870 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 CCDC81Q6ZN84 652 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 PRR23CQ6ZRP0 262 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 PLD6Q8N2A8 252 aaKnown RBP10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 ATP6V0D2Q8N8Y2 350 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 SHCBP1Q8NEM2 672 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 ACMSDQ8TDX5 336 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 ADAMTS16Q8TE57 1224 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 SLC10A4Q96EP9 437 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 FEM1CQ96JP0 617 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 CDK5RAP1Q96SZ6 601 aaKnown RBP10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 LHPPQ9H008 270 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 IRF2BPLQ9H1B7 796 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 SPAG4Q9NPE6 437 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 COPG1Q9Y678 874 aaKnown RBP10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 LY75O60449 1722 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 MRASO14807 208 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 GRAP2O75791 330 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 NPTX2P47972 431 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 KCNC4Q03721 635 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 PIGFQ07326 219 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 VAC14Q08AM6 782 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 LAMC2Q13753 1193 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 TTC23LQ6PF05 361 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 ARMC8Q8IUR7 673 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 KCTD17Q8N5Z5 321 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 OR7A2PQ8NGA2 310 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 MXRA8Q9BRK3 442 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 SNX15Q9NRS6 342 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 TJP2Q9UDY2 1190 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 IPO11Q9UI26 975 aaKnown RBP10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 BAG5Q9UL15 447 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 USP18Q9UMW8 372 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 SPEF1Q9Y4P9 236 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 IGLV3-22A0A075B6J6 115 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 A0A096LPK6 155 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 PRPSAP2O60256 369 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 ICMTO60725 284 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 USP12O75317 370 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 JRKO75564 520 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 YWHABP31946 246 aaKnown RBP10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 GRIA4P48058 902 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 SERPINB10P48595 397 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 IFITM2Q01629 132 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 SEZ6Q53EL9 994 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 TJAP1Q5JTD0 557 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 CYP4V2Q6ZWL3 525 aaPredicted RBP10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 GOLM1Q8NBJ4 401 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 S100ZQ8WXG8 99 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 ZNF516Q92618 1163 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 VPS33AQ96AX1 596 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 UNC93B1Q9H1C4 597 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 EHMT1Q9H9B1 1298 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 ZBTB26Q9HCK0 441 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 NGRNQ9NPE2 291 aaKnown RBP10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 SEPT10Q9P0V9 454 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 HACL1Q9UJ83 578 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 TLK1Q9UKI8 766 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 PCDHA11Q9Y5I1 949 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 DHRS12A0PJE2 317 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 INPP4BO15327 924 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 SEC24AO95486 1093 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 KRT6CP48668 564 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 TAP1Q03518 808 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 FASTKQ14296 549 aaKnown RBP10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 TDRD10Q5VZ19 366 aaKnown RBP10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 IL31Q6EBC2 164 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 NEK5Q6P3R8 708 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 KIAA0408Q6ZU52 694 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 BPHLQ86WA6 291 aaPredicted RBP10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 LRRC49Q8IUZ0 686 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 OMA1Q96E52 524 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 STRA6Q9BX79 667 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 DEFB129Q9H1M3 183 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 ATP13A3Q9H7F0 1226 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 RMND5AQ9H871 391 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 NMRAL1Q9HBL8 299 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 TCAF1Q9Y4C2 921 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 COL24A1Q17RW2 1714 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 CCDC78A2IDD5 438 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms