RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 NR6A1Q15406 480 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 PIGZQ86VD9 579 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 CYP4Z1Q86W10 505 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 C2orf15Q8WU43 125 aaKnown RBP14.88□□□□□ -0.03
SNPH-203ENST00000614659 PLEKHA8Q96JA3 519 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 PANX3Q96QZ0 392 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 RNPEPQ9H4A4 650 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 LRRC4CQ9HCJ2 640 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 FAM237BA0A1B0GVD1 139 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 RGSL1A5PLK6 1076 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 NCF1BA6NI72 391 aaPredicted RBP14.88□□□□□ -0.03
SNPH-203ENST00000614659 NCF1CA8MVU1 366 aaPredicted RBP14.88□□□□□ -0.03
SNPH-203ENST00000614659 TCEA3O75764 348 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 NCF1P14598 390 aaPredicted RBP14.88□□□□□ -0.03
SNPH-203ENST00000614659 SOAT1P35610 550 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 NEK3P51956 506 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 GRM3Q14832 879 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 LIPMQ5VYY2 423 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 ADGRD1Q6QNK2 874 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 VSTM1Q6UX27 236 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 OTOAQ7RTW8 1153 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 SETD9Q8NE22 299 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 SNED1Q8TER0 1413 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 PTCD2Q8WV60 388 aaKnown RBP14.88□□□□□ -0.03
SNPH-203ENST00000614659 C7orf26Q96N11 449 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 CDRT15Q96T59 188 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 CCDC28BQ9BUN5 200 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 C6orf203Q9P0P8 240 aaPredicted RBP14.88□□□□□ -0.03
SNPH-203ENST00000614659 SAE1Q9UBE0 346 aaPredicted RBP14.88□□□□□ -0.03
SNPH-203ENST00000614659 SALL4Q9UJQ4 1053 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 COL6A2P12110 1019 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 PAX7P23759 505 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 RRM2P31350 389 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 TTKP33981 857 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 FBXL19Q6PCT2 694 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 POTEHQ6S545 545 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 PLEKHM3Q6ZWE6 761 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 GLT6D1Q7Z4J2 308 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 MDM4O15151 490 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 RGS14O43566 566 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 PROCP04070 461 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 CLTBP09497 229 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 CDKN2BP42772 138 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 SCNN1BP51168 640 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 RAB10P61026 200 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 ZCCHC23Q6ZST2 131 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 SVOPQ8N4V2 548 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 STAG3L4Q8TBR4 150 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 ACTRT2Q8TDY3 377 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 TMEM245Q9H330 911 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 IMPAD1Q9NX62 359 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 COPG2Q9UBF2 871 aa14.88□□□□□ -0.03
SNPH-203ENST00000614659 FAM47E-STBD1D6RA91 191 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 AGPSO00116 658 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 ARIH2O95376 493 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 LBPP18428 481 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 THOP1P52888 689 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 TCHHL1Q5QJ38 904 aaPredicted RBP14.87□□□□□ -0.03
SNPH-203ENST00000614659 PACS1Q6VY07 963 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 CCDC81Q6ZN84 652 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 CXorf40AQ8TE69 158 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 REPS1Q96D71 796 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 PSMD12O00232 456 aaPredicted RBP14.87□□□□□ -0.03
SNPH-203ENST00000614659 TPST1O60507 370 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 CALCAP01258 141 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 PURAQ00577 322 aaKnown RBP14.87□□□□□ -0.03
SNPH-203ENST00000614659 PTPN20Q4JDL3 420 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 ARMC12Q5T9G4 340 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 LLGL2Q6P1M3 1020 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 RIPOR1Q6ZS17 1223 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 CLEC4DQ8WXI8 215 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 MAN1C1Q9NR34 630 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 H2AFY2Q9P0M6 372 aaPredicted RBP14.87□□□□□ -0.03
SNPH-203ENST00000614659 HDAC3O15379 428 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 BMP10O95393 424 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 BNIP2Q12982 314 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 LYPLAL1Q5VWZ2 237 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 AFTPHQ6ULP2 937 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.87□□□□□ -0.03
SNPH-203ENST00000614659 BRI3BPQ8WY22 251 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 QKIQ96PU8 341 aaKnown RBP eCLIP14.87□□□□□ -0.03
SNPH-203ENST00000614659 CCDC3Q9BQI4 270 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 BBS2Q9BXC9 721 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 SPASTQ9UBP0 616 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 FBXO10Q9UK96 956 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 NUP188Q5SRE5 1749 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 TRIM38O00635 465 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 MLYCDO95822 493 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 BPGMP07738 259 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 NFKB1P19838 968 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 TXNDC11Q6PKC3 985 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 BSNDQ8WZ55 320 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 PHF21BQ96EK2 531 aa14.87□□□□□ -0.03
SNPH-203ENST00000614659 TSPAN3O60637 253 aa14.86□□□□□ -0.03
SNPH-203ENST00000614659 BAIAP3O94812 1187 aa14.86□□□□□ -0.03
SNPH-203ENST00000614659 OR56A5P0C7T3 313 aa14.86□□□□□ -0.03
SNPH-203ENST00000614659 CCNB1P14635 433 aa14.86□□□□□ -0.03
SNPH-203ENST00000614659 ATP6V1C1P21283 382 aa14.86□□□□□ -0.03
SNPH-203ENST00000614659 PTPN9P43378 593 aa14.86□□□□□ -0.03
SNPH-203ENST00000614659 CCT8P50990 548 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms