RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 LGMNQ99538 433 aa13.46□□□□□ -0.25
MDC1-209ENST00000613547 OSBPL1AQ9BXW6 950 aa13.46□□□□□ -0.25
MDC1-209ENST00000613547 FBXL12Q9NXK8 326 aa13.46□□□□□ -0.25
MDC1-209ENST00000613547 AMACRQ9UHK6 382 aa13.46□□□□□ -0.25
MDC1-209ENST00000613547 CACNA1IQ9P0X4 2223 aa13.45□□□□□ -0.26
MDC1-209ENST00000613547 IGHV1OR15-9A0A0B4J2B8 117 aa13.45□□□□□ -0.26
MDC1-209ENST00000613547 HACD1B0YJ81 288 aa13.45□□□□□ -0.26
MDC1-209ENST00000613547 HRO43593 1189 aa13.45□□□□□ -0.26
MDC1-209ENST00000613547 NDUFS2O75306 463 aa13.45□□□□□ -0.26
MDC1-209ENST00000613547 RHOBTB1O94844 696 aa13.45□□□□□ -0.26
MDC1-209ENST00000613547 PEX11BO96011 259 aa13.45□□□□□ -0.26
MDC1-209ENST00000613547 IGLV3-19P01714 112 aa13.45□□□□□ -0.26
MDC1-209ENST00000613547 PECAM1P16284 738 aaPredicted RBP13.45□□□□□ -0.26
MDC1-209ENST00000613547 AP1S1P61966 158 aa13.45□□□□□ -0.26
MDC1-209ENST00000613547 ADCY2Q08462 1091 aa13.45□□□□□ -0.26
MDC1-209ENST00000613547 XRCC4Q13426 336 aa13.45□□□□□ -0.26
MDC1-209ENST00000613547 MAP7D1Q3KQU3 841 aa13.45□□□□□ -0.26
MDC1-209ENST00000613547 ARSIQ5FYB1 569 aa13.45□□□□□ -0.26
MDC1-209ENST00000613547 RALGPS1Q5JS13 557 aa13.45□□□□□ -0.26
MDC1-209ENST00000613547 CFAP58Q5T655 872 aa13.45□□□□□ -0.26
MDC1-209ENST00000613547 DCAF12L1Q5VU92 463 aa13.45□□□□□ -0.26
MDC1-209ENST00000613547 PRR23BQ6ZRT6 265 aa13.45□□□□□ -0.26
MDC1-209ENST00000613547 FAM124AQ86V42 546 aa13.45□□□□□ -0.26
MDC1-209ENST00000613547 HDDC3Q8N4P3 179 aa13.45□□□□□ -0.26
MDC1-209ENST00000613547 MAML1Q92585 1016 aa13.45□□□□□ -0.26
MDC1-209ENST00000613547 TRIM44Q96DX7 344 aaPredicted RBP13.45□□□□□ -0.26
MDC1-209ENST00000613547 EXOC2Q96KP1 924 aa13.45□□□□□ -0.26
MDC1-209ENST00000613547 TUBGCP5Q96RT8 1024 aa13.45□□□□□ -0.26
MDC1-209ENST00000613547 TLR10Q9BXR5 811 aa13.45□□□□□ -0.26
MDC1-209ENST00000613547 POLR1EQ9GZS1 481 aaKnown RBP13.45□□□□□ -0.26
MDC1-209ENST00000613547 BTBD1Q9H0C5 482 aa13.45□□□□□ -0.26
MDC1-209ENST00000613547 ATP13A3Q9H7F0 1226 aa13.45□□□□□ -0.26
MDC1-209ENST00000613547 SGK2Q9HBY8 427 aa13.45□□□□□ -0.26
MDC1-209ENST00000613547 SAE1Q9UBE0 346 aaPredicted RBP13.45□□□□□ -0.26
MDC1-209ENST00000613547 EVLQ9UI08 416 aaPredicted RBP13.45□□□□□ -0.26
MDC1-209ENST00000613547 FZD4Q9ULV1 537 aa13.45□□□□□ -0.26
MDC1-209ENST00000613547 INVSQ9Y283 1065 aa13.45□□□□□ -0.26
MDC1-209ENST00000613547 WASF2Q9Y6W5 498 aa13.45□□□□□ -0.26
MDC1-209ENST00000613547 A0A1W2PP55 124 aa13.44□□□□□ -0.26
MDC1-209ENST00000613547 H7C0C1 242 aa13.44□□□□□ -0.26
MDC1-209ENST00000613547 KCNK1O00180 336 aa13.44□□□□□ -0.26
MDC1-209ENST00000613547 SLC7A4O43246 635 aa13.44□□□□□ -0.26
MDC1-209ENST00000613547 LEFTY1O75610 366 aa13.44□□□□□ -0.26
MDC1-209ENST00000613547 CTSLP07711 333 aa13.44□□□□□ -0.26
MDC1-209ENST00000613547 CES1P23141 567 aa13.44□□□□□ -0.26
MDC1-209ENST00000613547 SERPINA4P29622 427 aa13.44□□□□□ -0.26
MDC1-209ENST00000613547 NBL1P41271 181 aa13.44□□□□□ -0.26
MDC1-209ENST00000613547 ATP5OP48047 213 aa13.44□□□□□ -0.26
MDC1-209ENST00000613547 SCNN1BP51168 640 aa13.44□□□□□ -0.26
MDC1-209ENST00000613547 IFI35P80217 286 aaPredicted RBP13.44□□□□□ -0.26
MDC1-209ENST00000613547 RPL6Q02878 288 aaKnown RBP13.44□□□□□ -0.26
MDC1-209ENST00000613547 BCL2L1Q07817 233 aa13.44□□□□□ -0.26
MDC1-209ENST00000613547 ITKQ08881 620 aa13.44□□□□□ -0.26
MDC1-209ENST00000613547 SRSF5Q13243 272 aaKnown RBP13.44□□□□□ -0.26
MDC1-209ENST00000613547 NOMO1Q15155 1222 aa13.44□□□□□ -0.26
MDC1-209ENST00000613547 AADACL2Q6P093 401 aa13.44□□□□□ -0.26
MDC1-209ENST00000613547 GDPD4Q6W3E5 623 aa13.44□□□□□ -0.26
MDC1-209ENST00000613547 LPCAT2Q7L5N7 544 aa13.44□□□□□ -0.26
MDC1-209ENST00000613547 SRLQ86TD4 932 aa13.44□□□□□ -0.26
MDC1-209ENST00000613547 ZC3H18Q86VM9 953 aaKnown RBP13.44□□□□□ -0.26
MDC1-209ENST00000613547 CDKL3Q8IVW4 592 aaPredicted RBP13.44□□□□□ -0.26
MDC1-209ENST00000613547 SLC35F6Q8N357 371 aa13.44□□□□□ -0.26
MDC1-209ENST00000613547 ACTL9Q8TC94 416 aa13.44□□□□□ -0.26
MDC1-209ENST00000613547 MAIP1Q8WWC4 291 aa13.44□□□□□ -0.26
MDC1-209ENST00000613547 TOE1Q96GM8 510 aaKnown RBP13.44□□□□□ -0.26
MDC1-209ENST00000613547 CPEB1Q9BZB8 566 aaKnown RBP13.44□□□□□ -0.26
MDC1-209ENST00000613547 EPC1Q9H2F5 836 aa13.44□□□□□ -0.26
MDC1-209ENST00000613547 NT5MQ9NPB1 228 aa13.44□□□□□ -0.26
MDC1-209ENST00000613547 SCUBE2Q9NQ36 999 aa13.44□□□□□ -0.26
MDC1-209ENST00000613547 FAM86C1Q9NVL1 165 aa13.44□□□□□ -0.26
MDC1-209ENST00000613547 RBM22Q9NW64 420 aaKnown RBP eCLIP13.44□□□□□ -0.26
MDC1-209ENST00000613547 WSB2Q9NYS7 404 aaPredicted RBP13.44□□□□□ -0.26
MDC1-209ENST00000613547 SEPT10Q9P0V9 454 aa13.44□□□□□ -0.26
MDC1-209ENST00000613547 SARDHQ9UL12 918 aa13.44□□□□□ -0.26
MDC1-209ENST00000613547 TTLL3Q9Y4R7 772 aa13.44□□□□□ -0.26
MDC1-209ENST00000613547 ATG2BQ96BY7 2078 aa13.44□□□□□ -0.26
MDC1-209ENST00000613547 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.43□□□□□ -0.26
MDC1-209ENST00000613547 LRRC72A6NJI9 287 aa13.43□□□□□ -0.26
MDC1-209ENST00000613547 USP27XA6NNY8 438 aa13.43□□□□□ -0.26
MDC1-209ENST00000613547 STK10O94804 968 aaKnown RBP13.43□□□□□ -0.26
MDC1-209ENST00000613547 JCHAINP01591 159 aa13.43□□□□□ -0.26
MDC1-209ENST00000613547 UGT2B4P06133 528 aa13.43□□□□□ -0.26
MDC1-209ENST00000613547 ITGB7P26010 798 aa13.43□□□□□ -0.26
MDC1-209ENST00000613547 NEK3P51956 506 aa13.43□□□□□ -0.26
MDC1-209ENST00000613547 EIF3EP60228 445 aaKnown RBP13.43□□□□□ -0.26
MDC1-209ENST00000613547 GNG11P61952 73 aa13.43□□□□□ -0.26
MDC1-209ENST00000613547 OTUD4Q01804 1114 aaKnown RBP13.43□□□□□ -0.26
MDC1-209ENST00000613547 PRKD1Q15139 912 aaPredicted RBP13.43□□□□□ -0.26
MDC1-209ENST00000613547 POM121L1PQ3SYA9 428 aa13.43□□□□□ -0.26
MDC1-209ENST00000613547 SLC45A4Q5BKX6 768 aa13.43□□□□□ -0.26
MDC1-209ENST00000613547 ZNF805Q5CZA5 627 aa13.43□□□□□ -0.26
MDC1-209ENST00000613547 FBXL19Q6PCT2 694 aa13.43□□□□□ -0.26
MDC1-209ENST00000613547 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.43□□□□□ -0.26
MDC1-209ENST00000613547 ERN2Q76MJ5 926 aaKnown RBP13.43□□□□□ -0.26
MDC1-209ENST00000613547 AADATQ8N5Z0 425 aa13.43□□□□□ -0.26
MDC1-209ENST00000613547 FAM160A2Q8N612 972 aaPredicted RBP13.43□□□□□ -0.26
MDC1-209ENST00000613547 TEX26Q8N6G2 289 aa13.43□□□□□ -0.26
MDC1-209ENST00000613547 ZNF641Q96N77 438 aaPredicted RBP13.43□□□□□ -0.26
MDC1-209ENST00000613547 QKIQ96PU8 341 aaKnown RBP eCLIP13.43□□□□□ -0.26
MDC1-209ENST00000613547 NUDCD1Q96RS6 583 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms