RNA–Protein interactions for RNA: ENST00000604247.1

SRGAP2-209, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

Gene SRGAP2, Length 2,499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-209ENST00000604247 ATPAF2Q8N5M1 289 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 KYQ8NBH2 561 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 TRPV1Q8NER1 839 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 RCN3Q96D15 328 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 CNDP1Q96KN2 507 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 OSBPL2Q9H1P3 480 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 GLOD4Q9HC38 313 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 PAPOLBQ9NRJ5 636 aaKnown RBP13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 NSMCE4AQ9NXX6 385 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 STX16-NPEPL1H3BU86 382 aa13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 AP3B1O00203 1094 aa13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 PSMD3O43242 534 aa13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 PAGE1O75459 146 aa13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 UQCRBP14927 111 aa13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 STMN1P16949 149 aa13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 VCLP18206 1134 aa13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 HOXC8P31273 242 aa13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 THOP1P52888 689 aa13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 PKNOX1P55347 436 aa13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 HUNKP57058 714 aa13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 TAS2R39P59534 338 aa13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 MRPS6P82932 125 aaKnown RBP13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 COG7P83436 770 aa13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 CYLC2Q14093 348 aaPredicted RBP13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 FSCN1Q16658 493 aaKnown RBP13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 ACAD11Q709F0 780 aa13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 KLHDC8BQ8IXV7 354 aa13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 RP9Q8TA86 221 aaKnown RBP13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 FCRL5Q96RD9 977 aa13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 STK39Q9UEW8 545 aa13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 NEMP2A6NFY4 417 aa13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 SLC1A2P43004 574 aa13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 ZNF135P52742 658 aaPredicted RBP13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 ATXN3P54252 364 aaPredicted RBP13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 NSUN2Q08J23 767 aaKnown RBP eCLIP13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 MED21Q13503 144 aa13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 EIF4EBP2Q13542 120 aaPredicted RBP13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 GRAMD1BQ3KR37 738 aa13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 NOMO2Q5JPE7 1267 aa13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 FAM171BQ6P995 826 aa13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 IRGQQ8WZA9 623 aa13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 USP13Q92995 863 aaPredicted RBP13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 GBP5Q96PP8 586 aa13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 IL12RB2Q99665 862 aa13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 TRPV6Q9H1D0 765 aa13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 SUDS3Q9H7L9 328 aaPredicted RBP13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 RBM22Q9NW64 420 aaKnown RBP eCLIP13.14□□□□□ -0.31
SRGAP2-209ENST00000604247 AHCYL1O43865 530 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 ANXA9O76027 345 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 IGLV3-25P01717 112 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 CHRNA1P02708 482 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 HLA-DQB2P05538 268 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 ENO3P13929 434 aaPredicted RBP13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 XRCC1P18887 633 aaPredicted RBP13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 DNAJB2P25686 324 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 PPARGP37231 505 aaPredicted RBP13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 DPP6P42658 865 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 PAPOLAP51003 745 aaKnown RBP13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 POLE2P56282 527 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 MS4A2Q01362 244 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 UGP2Q16851 508 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 ARTNQ5T4W7 220 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 SLC30A9Q6PML9 568 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 SDCCAG8Q86SQ7 713 aaPredicted RBP13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 CNTN4Q8IWV2 1026 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 CPSF7Q8N684 471 aaKnown RBP13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 KDM1BQ8NB78 822 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 OR10T2Q8NGX3 314 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 ELMO2Q96JJ3 720 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 FCRL2Q96LA5 508 aaPredicted RBP13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 KATNAL1Q9BW62 490 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 ZNF385DQ9H6B1 395 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 AGO3Q9H9G7 860 aaKnown RBP13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 CHST12Q9NRB3 414 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 SPATS2LQ9NUQ6 558 aaKnown RBP13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 ARHGEF38Q9NXL2 777 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 MPP6Q9NZW5 540 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 CDYLQ9Y232 598 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 INPP5FQ9Y2H2 1132 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 NYNRINQ9P2P1 1898 aaKnown RBP13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 CAPN8A6NHC0 703 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 M0QZ92 97 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 CASQ2O14958 399 aaPredicted RBP13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 MATN3O15232 486 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 IRAK2O43187 625 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 COL6A2P12110 1019 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 HNRNPLP14866 589 aaKnown RBP eCLIP13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 ARSAP15289 507 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 ADRA1AP35348 466 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 ZNF33AQ06730 810 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 CEACAM7Q14002 265 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 TAF1CQ15572 869 aaPredicted RBP13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 PCSK7Q16549 785 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 ZNF423Q2M1K9 1284 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 MMEL1Q495T6 779 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 ZNF789Q5FWF6 425 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 ZNF470Q6ECI4 717 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 TAF2Q6P1X5 1199 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 CNSTQ6PJW8 725 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 C17orf99Q6UX52 265 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms