RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 BTN2A2Q8WVV5 523 aa17.5■□□□□ 0.39
SMG9-210ENST00000600097 ASB12Q8WXK4 309 aa17.5■□□□□ 0.39
SMG9-210ENST00000600097 ISG20Q96AZ6 181 aaKnown RBP17.5■□□□□ 0.39
SMG9-210ENST00000600097 KLF6Q99612 283 aaPredicted RBP17.5■□□□□ 0.39
SMG9-210ENST00000600097 CAAP1Q9H8G2 361 aa17.5■□□□□ 0.39
SMG9-210ENST00000600097 ASCL3Q9NQ33 180 aa17.5■□□□□ 0.39
SMG9-210ENST00000600097 TMPRSS4Q9NRS4 437 aa17.5■□□□□ 0.39
SMG9-210ENST00000600097 KIAA1468Q9P260 1216 aa17.5■□□□□ 0.39
SMG9-210ENST00000600097 PPARGC1AQ9UBK2 798 aaKnown RBP17.5■□□□□ 0.39
SMG9-210ENST00000600097 AJAP1Q9UKB5 411 aaPredicted RBP17.5■□□□□ 0.39
SMG9-210ENST00000600097 ZNF462Q96JM2 2506 aa17.49■□□□□ 0.39
SMG9-210ENST00000600097 TRPM6Q9BX84 2022 aa17.49■□□□□ 0.39
SMG9-210ENST00000600097 CPED1A4D0V7 1026 aa17.49■□□□□ 0.39
SMG9-210ENST00000600097 EME2A4GXA9 379 aaPredicted RBP17.49■□□□□ 0.39
SMG9-210ENST00000600097 RAD51BO15315 384 aa17.49■□□□□ 0.39
SMG9-210ENST00000600097 KLK10O43240 276 aa17.49■□□□□ 0.39
SMG9-210ENST00000600097 PNMA6AP0CW24 399 aaPredicted RBP17.49■□□□□ 0.39
SMG9-210ENST00000600097 JUNDP17535 347 aa17.49■□□□□ 0.39
SMG9-210ENST00000600097 RBMS1P29558 406 aaKnown RBP17.49■□□□□ 0.39
SMG9-210ENST00000600097 FLT3P36888 993 aa17.49■□□□□ 0.39
SMG9-210ENST00000600097 GEMIN4P57678 1058 aaKnown RBP17.49■□□□□ 0.39
SMG9-210ENST00000600097 ARF5P84085 180 aa17.49■□□□□ 0.39
SMG9-210ENST00000600097 CDKN3Q16667 212 aa17.49■□□□□ 0.39
SMG9-210ENST00000600097 ARTNQ5T4W7 220 aa17.49■□□□□ 0.39
SMG9-210ENST00000600097 PARS2Q7L3T8 475 aaKnown RBP17.49■□□□□ 0.39
SMG9-210ENST00000600097 BNIPLQ7Z465 357 aa17.49■□□□□ 0.39
SMG9-210ENST00000600097 ARHGEF26Q96DR7 871 aa17.49■□□□□ 0.39
SMG9-210ENST00000600097 IL12RB2Q99665 862 aa17.49■□□□□ 0.39
SMG9-210ENST00000600097 RETREG1Q9H6L5 497 aa17.49■□□□□ 0.39
SMG9-210ENST00000600097 ZDHHC6Q9H6R6 413 aa17.49■□□□□ 0.39
SMG9-210ENST00000600097 HECAQ9UBI9 543 aaPredicted RBP17.49■□□□□ 0.39
SMG9-210ENST00000600097 FCF1Q9Y324 198 aaKnown RBP17.49■□□□□ 0.39
SMG9-210ENST00000600097 CFAP46Q8IYW2 2715 aa17.49■□□□□ 0.39
SMG9-210ENST00000600097 TDRD6O60522 2096 aaKnown RBP17.49■□□□□ 0.39
SMG9-210ENST00000600097 IGLON5A6NGN9 336 aa17.48■□□□□ 0.39
SMG9-210ENST00000600097 NEMP1O14524 444 aa17.48■□□□□ 0.39
SMG9-210ENST00000600097 GADD45BO75293 160 aaPredicted RBP17.48■□□□□ 0.39
SMG9-210ENST00000600097 TCEA3O75764 348 aa17.48■□□□□ 0.39
SMG9-210ENST00000600097 LSM8O95777 96 aaKnown RBP17.48■□□□□ 0.39
SMG9-210ENST00000600097 CYP11B1P15538 503 aa17.48■□□□□ 0.39
SMG9-210ENST00000600097 TGM2P21980 687 aa17.48■□□□□ 0.39
SMG9-210ENST00000600097 RPIAP49247 311 aa17.48■□□□□ 0.39
SMG9-210ENST00000600097 PFN3P60673 137 aa17.48■□□□□ 0.39
SMG9-210ENST00000600097 MAN2A1Q16706 1144 aa17.48■□□□□ 0.39
SMG9-210ENST00000600097 ARHGAP40Q5TG30 622 aa17.48■□□□□ 0.39
SMG9-210ENST00000600097 ARCQ7LC44 396 aa17.48■□□□□ 0.39
SMG9-210ENST00000600097 EFL1Q7Z2Z2 1120 aaKnown RBP17.48■□□□□ 0.39
SMG9-210ENST00000600097 FAM131BQ86XD5 332 aa17.48■□□□□ 0.39
SMG9-210ENST00000600097 DRC7Q8IY82 874 aa17.48■□□□□ 0.39
SMG9-210ENST00000600097 LMX1AQ8TE12 382 aa17.48■□□□□ 0.39
SMG9-210ENST00000600097 SNRNP27Q8WVK2 155 aaKnown RBP17.48■□□□□ 0.39
SMG9-210ENST00000600097 GLMNQ92990 594 aa17.48■□□□□ 0.39
SMG9-210ENST00000600097 CCDC97Q96F63 343 aaPredicted RBP17.48■□□□□ 0.39
SMG9-210ENST00000600097 VCPIP1Q96JH7 1222 aa17.48■□□□□ 0.39
SMG9-210ENST00000600097 SLC46A1Q96NT5 459 aa17.48■□□□□ 0.39
SMG9-210ENST00000600097 CPNE5Q9HCH3 593 aa17.48■□□□□ 0.39
SMG9-210ENST00000600097 SPASTQ9UBP0 616 aa17.48■□□□□ 0.39
SMG9-210ENST00000600097 SATB2Q9UPW6 733 aa17.48■□□□□ 0.39
SMG9-210ENST00000600097 ASH1LQ9NR48 2969 aaKnown RBP17.48■□□□□ 0.39
SMG9-210ENST00000600097 C16orf96A6NNT2 1141 aa17.47■□□□□ 0.39
SMG9-210ENST00000600097 PRKCSHP14314 528 aaPredicted RBP17.47■□□□□ 0.39
SMG9-210ENST00000600097 VAC14Q08AM6 782 aa17.47■□□□□ 0.39
SMG9-210ENST00000600097 RAPGEF1Q13905 1077 aa17.47■□□□□ 0.39
SMG9-210ENST00000600097 PTK2BQ14289 1009 aa17.47■□□□□ 0.39
SMG9-210ENST00000600097 DRAP1Q14919 205 aaPredicted RBP17.47■□□□□ 0.39
SMG9-210ENST00000600097 POLD3Q15054 466 aaPredicted RBP17.47■□□□□ 0.39
SMG9-210ENST00000600097 NR0B2Q15466 257 aa17.47■□□□□ 0.39
SMG9-210ENST00000600097 TPD52L1Q16890 204 aaPredicted RBP17.47■□□□□ 0.39
SMG9-210ENST00000600097 DEFB133Q30KQ1 61 aa17.47■□□□□ 0.39
SMG9-210ENST00000600097 ZNF805Q5CZA5 627 aa17.47■□□□□ 0.39
SMG9-210ENST00000600097 C3orf38Q5JPI3 329 aa17.47■□□□□ 0.39
SMG9-210ENST00000600097 GUSBP11Q6P575 273 aa17.47■□□□□ 0.39
SMG9-210ENST00000600097 RBM44Q6ZP01 1051 aaKnown RBP17.47■□□□□ 0.39
SMG9-210ENST00000600097 FAM114A1Q8IWE2 563 aa17.47■□□□□ 0.39
SMG9-210ENST00000600097 RYBPQ8N488 228 aaPredicted RBP17.47■□□□□ 0.39
SMG9-210ENST00000600097 MLKLQ8NB16 471 aa17.47■□□□□ 0.39
SMG9-210ENST00000600097 WDR48Q8TAF3 677 aa17.47■□□□□ 0.39
SMG9-210ENST00000600097 NAT6Q93015 286 aa17.47■□□□□ 0.39
SMG9-210ENST00000600097 TBATAQ96M53 351 aa17.47■□□□□ 0.39
SMG9-210ENST00000600097 CFAP57Q96MR6 1250 aa17.47■□□□□ 0.39
SMG9-210ENST00000600097 TM6SF2Q9BZW4 377 aa17.47■□□□□ 0.39
SMG9-210ENST00000600097 NDST4Q9H3R1 872 aa17.47■□□□□ 0.39
SMG9-210ENST00000600097 KLF15Q9UIH9 416 aa17.47■□□□□ 0.39
SMG9-210ENST00000600097 TMEM59LQ9UK28 342 aa17.47■□□□□ 0.39
SMG9-210ENST00000600097 PCDHGA8Q9Y5G5 932 aa17.47■□□□□ 0.39
SMG9-210ENST00000600097 GOLGA8SH3BPF8 625 aa17.46■□□□□ 0.39
SMG9-210ENST00000600097 SPINT1O43278 529 aa17.46■□□□□ 0.39
SMG9-210ENST00000600097 CD160O95971 181 aa17.46■□□□□ 0.39
SMG9-210ENST00000600097 MLLT3P42568 568 aaPredicted RBP17.46■□□□□ 0.39
SMG9-210ENST00000600097 MAPKAPK2P49137 400 aa17.46■□□□□ 0.39
SMG9-210ENST00000600097 THOP1P52888 689 aa17.46■□□□□ 0.39
SMG9-210ENST00000600097 NRG1Q02297 640 aaPredicted RBP17.46■□□□□ 0.39
SMG9-210ENST00000600097 EIF2B5Q13144 721 aaKnown RBP17.46■□□□□ 0.39
SMG9-210ENST00000600097 ARL13BQ3SXY8 428 aa17.46■□□□□ 0.39
SMG9-210ENST00000600097 ATXN7L3BQ96GX2 97 aa17.46■□□□□ 0.39
SMG9-210ENST00000600097 BOCQ9BWV1 1114 aa17.46■□□□□ 0.39
SMG9-210ENST00000600097 OSBPL1AQ9BXW6 950 aa17.46■□□□□ 0.39
SMG9-210ENST00000600097 OR12D3Q9UGF7 316 aa17.46■□□□□ 0.39
SMG9-210ENST00000600097 APOBEC3BQ9UH17 382 aaKnown RBP17.46■□□□□ 0.39
SMG9-210ENST00000600097 HPCAL4Q9UM19 191 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms