RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 CCDC170Q8IYT3 715 aa8.11□□□□□ -1.11
CHMP2A-205ENST00000600006 TBC1D3Q8IZP1 549 aaPredicted RBP8.11□□□□□ -1.11
CHMP2A-205ENST00000600006 NPWQ8N729 165 aa8.11□□□□□ -1.11
CHMP2A-205ENST00000600006 SPC24Q8NBT2 197 aa8.11□□□□□ -1.11
CHMP2A-205ENST00000600006 CCDC112Q8NEF3 446 aa8.11□□□□□ -1.11
CHMP2A-205ENST00000600006 DEFB124Q8NES8 71 aa8.11□□□□□ -1.11
CHMP2A-205ENST00000600006 ZNF564Q8TBZ8 553 aaPredicted RBP8.11□□□□□ -1.11
CHMP2A-205ENST00000600006 TEKT4Q8WW24 435 aa8.11□□□□□ -1.11
CHMP2A-205ENST00000600006 CTNNBL1Q8WYA6 563 aaPredicted RBP8.11□□□□□ -1.11
CHMP2A-205ENST00000600006 BTBD6Q96KE9 485 aa8.11□□□□□ -1.11
CHMP2A-205ENST00000600006 CCDC42Q96M95 316 aa8.11□□□□□ -1.11
CHMP2A-205ENST00000600006 GDAP1L1Q96MZ0 367 aa8.11□□□□□ -1.11
CHMP2A-205ENST00000600006 OSBPL1AQ9BXW6 950 aa8.11□□□□□ -1.11
CHMP2A-205ENST00000600006 PACSIN1Q9BY11 444 aa8.11□□□□□ -1.11
CHMP2A-205ENST00000600006 ZDHHC6Q9H6R6 413 aa8.11□□□□□ -1.11
CHMP2A-205ENST00000600006 IL21RQ9HBE5 538 aa8.11□□□□□ -1.11
CHMP2A-205ENST00000600006 LUC7LQ9NQ29 371 aaKnown RBP8.11□□□□□ -1.11
CHMP2A-205ENST00000600006 DYRK4Q9NR20 520 aa8.11□□□□□ -1.11
CHMP2A-205ENST00000600006 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.11□□□□□ -1.11
CHMP2A-205ENST00000600006 CWC15Q9P013 229 aaKnown RBP8.11□□□□□ -1.11
CHMP2A-205ENST00000600006 UVRAGQ9P2Y5 699 aa8.11□□□□□ -1.11
CHMP2A-205ENST00000600006 HECAQ9UBI9 543 aaPredicted RBP8.11□□□□□ -1.11
CHMP2A-205ENST00000600006 LHX3Q9UBR4 397 aa8.11□□□□□ -1.11
CHMP2A-205ENST00000600006 FNDC3AQ9Y2H6 1198 aaKnown RBP8.11□□□□□ -1.11
CHMP2A-205ENST00000600006 SNX11Q9Y5W9 270 aa8.11□□□□□ -1.11
CHMP2A-205ENST00000600006 CNOT1A5YKK6 2376 aaKnown RBP8.11□□□□□ -1.11
CHMP2A-205ENST00000600006 COL5A1P20908 1838 aaPredicted RBP8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 ARHGAP42A6NI28 874 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 MYO1FO00160 1098 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 WNT9AO14904 365 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 GIPC1O14908 333 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 DAPK3O43293 454 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 AP1G1O43747 822 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 AKR1B10O60218 316 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 PRAMEF11O60813 436 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 RNGTTO60942 597 aaKnown RBP8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 PROSCO94903 275 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 IPO7O95373 1038 aaKnown RBP8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 WNT1P04628 370 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 H2AFZP0C0S5 128 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 TMEM253P0C7T8 217 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 RARAP10276 462 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 ADRB3P13945 408 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 PMLP29590 882 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 CYLC1P35663 651 aaPredicted RBP8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 ARL4AP40617 200 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 ABL2P42684 1182 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 DNA2P51530 1060 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 RHOAP61586 193 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 CYTH1Q15438 398 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 SMTNL2Q2TAL5 461 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 HLA-BQ31612 363 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 TMEM259Q4ZIN3 620 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 SETMARQ53H47 684 aaPredicted RBP8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 KCNT1Q5JUK3 1230 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 ATXN7L2Q5T6C5 722 aaPredicted RBP8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 N4BP2L1Q5TBK1 243 aaPredicted RBP8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 TXNRD3NBQ6F5E7 133 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 H2AFVQ71UI9 128 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 POLNQ7Z5Q5 900 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 ADAT2Q7Z6V5 191 aaKnown RBP8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 PRPF39Q86UA1 669 aaKnown RBP8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 IQCHQ86VS3 1027 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 ZSCAN30Q86W11 494 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 HORMAD1Q86X24 394 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 ZNF354CQ86Y25 554 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 OR6K2Q8NGY2 324 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 FAM71BQ8TC56 605 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 TSC1Q92574 1164 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 HSPH1Q92598 858 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 CELF6Q96J87 481 aaKnown RBP8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 SERAC1Q96JX3 654 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 CSPG4P5Q96PW8 444 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 CHP1Q99653 195 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 SLC39A8Q9C0K1 460 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 SLC32A1Q9H598 525 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 GAREM1Q9H706 876 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 ZWILCHQ9H900 591 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 NHEJ1Q9H9Q4 299 aaPredicted RBP8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 PCDH18Q9HCL0 1135 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 TM7SF3Q9NS93 570 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 RCOR3Q9P2K3 495 aaPredicted RBP8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 UBA2Q9UBT2 640 aaPredicted RBP8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 LCMT1Q9UIC8 334 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 ANKRD6Q9Y2G4 727 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 MFHAS1Q9Y4C4 1052 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 PCDHGB2Q9Y5G2 931 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 FADS3Q9Y5Q0 445 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 LRRK1Q38SD2 2015 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 TRPM6Q9BX84 2022 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 SHROOM3Q8TF72 1996 aa8.1□□□□□ -1.11
CHMP2A-205ENST00000600006 NCOR2Q9Y618 2525 aa8.09□□□□□ -1.11
CHMP2A-205ENST00000600006 A0A1W2PQU0 124 aa8.09□□□□□ -1.11
CHMP2A-205ENST00000600006 TSPAN11A1L157 253 aa8.09□□□□□ -1.11
CHMP2A-205ENST00000600006 PRAMEF26H0Y7S4 382 aa8.09□□□□□ -1.11
CHMP2A-205ENST00000600006 H0Y8X5 98 aa8.09□□□□□ -1.11
CHMP2A-205ENST00000600006 J3KR12 359 aa8.09□□□□□ -1.11
CHMP2A-205ENST00000600006 KRIT1O00522 736 aa8.09□□□□□ -1.11
CHMP2A-205ENST00000600006 SPINT1O43278 529 aa8.09□□□□□ -1.11
CHMP2A-205ENST00000600006 MTA2O94776 668 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms