RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 PRPF39Q86UA1 669 aaKnown RBP18.79■□□□□ 0.6
SHKBP1-202ENST00000593764 NPWQ8N729 165 aa18.79■□□□□ 0.6
SHKBP1-202ENST00000593764 CASKIN2Q8WXE0 1202 aa18.79■□□□□ 0.6
SHKBP1-202ENST00000593764 SERAC1Q96JX3 654 aa18.79■□□□□ 0.6
SHKBP1-202ENST00000593764 ZDHHC6Q9H6R6 413 aa18.79■□□□□ 0.6
SHKBP1-202ENST00000593764 DYRK4Q9NR20 520 aa18.79■□□□□ 0.6
SHKBP1-202ENST00000593764 MYO1FO00160 1098 aa18.78■□□□□ 0.6
SHKBP1-202ENST00000593764 DAPK3O43293 454 aa18.78■□□□□ 0.6
SHKBP1-202ENST00000593764 SH3BP5O60239 455 aa18.78■□□□□ 0.6
SHKBP1-202ENST00000593764 RNGTTO60942 597 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-202ENST00000593764 RARAP10276 462 aa18.78■□□□□ 0.6
SHKBP1-202ENST00000593764 CD38P28907 300 aa18.78■□□□□ 0.6
SHKBP1-202ENST00000593764 PAPOLAP51003 745 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-202ENST00000593764 SLC25A11Q02978 314 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-202ENST00000593764 CCDC15Q0P6D6 951 aa18.78■□□□□ 0.6
SHKBP1-202ENST00000593764 NEK5Q6P3R8 708 aa18.78■□□□□ 0.6
SHKBP1-202ENST00000593764 DBX2Q6ZNG2 339 aa18.78■□□□□ 0.6
SHKBP1-202ENST00000593764 PARS2Q7L3T8 475 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-202ENST00000593764 POLNQ7Z5Q5 900 aa18.78■□□□□ 0.6
SHKBP1-202ENST00000593764 ADAT2Q7Z6V5 191 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-202ENST00000593764 PPP1R16AQ96I34 528 aa18.78■□□□□ 0.6
SHKBP1-202ENST00000593764 LRIG1Q96JA1 1093 aa18.78■□□□□ 0.6
SHKBP1-202ENST00000593764 CAMK1GQ96NX5 476 aa18.78■□□□□ 0.6
SHKBP1-202ENST00000593764 ZWILCHQ9H900 591 aa18.78■□□□□ 0.6
SHKBP1-202ENST00000593764 AASDHPPTQ9NRN7 309 aa18.78■□□□□ 0.6
SHKBP1-202ENST00000593764 TM7SF3Q9NS93 570 aa18.78■□□□□ 0.6
SHKBP1-202ENST00000593764 LHX3Q9UBR4 397 aa18.78■□□□□ 0.6
SHKBP1-202ENST00000593764 ZFR2Q9UPR6 939 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-202ENST00000593764 A0A1W2PQU0 124 aa18.77■□□□□ 0.6
SHKBP1-202ENST00000593764 KRIT1O00522 736 aa18.77■□□□□ 0.6
SHKBP1-202ENST00000593764 PRAMEF11O60813 436 aa18.77■□□□□ 0.6
SHKBP1-202ENST00000593764 ADRB3P13945 408 aa18.77■□□□□ 0.6
SHKBP1-202ENST00000593764 NUDT1P36639 197 aa18.77■□□□□ 0.6
SHKBP1-202ENST00000593764 NEK3P51956 506 aa18.77■□□□□ 0.6
SHKBP1-202ENST00000593764 FAM193AP78312 1265 aa18.77■□□□□ 0.6
SHKBP1-202ENST00000593764 ZNF423Q2M1K9 1284 aa18.77■□□□□ 0.6
SHKBP1-202ENST00000593764 ZNF284Q2VY69 593 aa18.77■□□□□ 0.6
SHKBP1-202ENST00000593764 ZNF805Q5CZA5 627 aa18.77■□□□□ 0.6
SHKBP1-202ENST00000593764 NAPEPLDQ6IQ20 393 aa18.77■□□□□ 0.6
SHKBP1-202ENST00000593764 CPNE8Q86YQ8 564 aa18.77■□□□□ 0.6
SHKBP1-202ENST00000593764 TP53INP2Q8IXH6 220 aa18.77■□□□□ 0.6
SHKBP1-202ENST00000593764 RYBPQ8N488 228 aaPredicted RBP18.77■□□□□ 0.6
SHKBP1-202ENST00000593764 ZNF564Q8TBZ8 553 aaPredicted RBP18.77■□□□□ 0.6
SHKBP1-202ENST00000593764 TEKT4Q8WW24 435 aa18.77■□□□□ 0.6
SHKBP1-202ENST00000593764 HSPH1Q92598 858 aa18.77■□□□□ 0.6
SHKBP1-202ENST00000593764 SLC32A1Q9H598 525 aa18.77■□□□□ 0.6
SHKBP1-202ENST00000593764 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.77■□□□□ 0.6
SHKBP1-202ENST00000593764 ETNK2Q9NVF9 386 aa18.77■□□□□ 0.6
SHKBP1-202ENST00000593764 ZNHIT6Q9NWK9 470 aaKnown RBP18.77■□□□□ 0.6
SHKBP1-202ENST00000593764 DMTF1Q9Y222 760 aa18.77■□□□□ 0.6
SHKBP1-202ENST00000593764 MFHAS1Q9Y4C4 1052 aa18.77■□□□□ 0.6
SHKBP1-202ENST00000593764 FADS3Q9Y5Q0 445 aa18.77■□□□□ 0.6
SHKBP1-202ENST00000593764 TMEM131Q92545 1883 aa18.76■□□□□ 0.59
SHKBP1-202ENST00000593764 ARHGAP42A6NI28 874 aa18.76■□□□□ 0.59
SHKBP1-202ENST00000593764 C16orf96A6NNT2 1141 aa18.76■□□□□ 0.59
SHKBP1-202ENST00000593764 H0Y8X5 98 aa18.76■□□□□ 0.59
SHKBP1-202ENST00000593764 UGT2B4P06133 528 aa18.76■□□□□ 0.59
SHKBP1-202ENST00000593764 TPM1P09493 284 aa18.76■□□□□ 0.59
SHKBP1-202ENST00000593764 H2AFZP0C0S5 128 aa18.76■□□□□ 0.59
SHKBP1-202ENST00000593764 AMPD1P23109 780 aa18.76■□□□□ 0.59
SHKBP1-202ENST00000593764 PMLP29590 882 aa18.76■□□□□ 0.59
SHKBP1-202ENST00000593764 C21orf59P57076 290 aa18.76■□□□□ 0.59
SHKBP1-202ENST00000593764 RHOAP61586 193 aa18.76■□□□□ 0.59
SHKBP1-202ENST00000593764 TSR1Q2NL82 804 aaKnown RBP18.76■□□□□ 0.59
SHKBP1-202ENST00000593764 FBXL19Q6PCT2 694 aa18.76■□□□□ 0.59
SHKBP1-202ENST00000593764 ARHGAP36Q6ZRI8 547 aa18.76■□□□□ 0.59
SHKBP1-202ENST00000593764 H2AFVQ71UI9 128 aa18.76■□□□□ 0.59
SHKBP1-202ENST00000593764 HORMAD1Q86X24 394 aa18.76■□□□□ 0.59
SHKBP1-202ENST00000593764 MFSD2AQ8NA29 543 aa18.76■□□□□ 0.59
SHKBP1-202ENST00000593764 TSC1Q92574 1164 aa18.76■□□□□ 0.59
SHKBP1-202ENST00000593764 KLK6Q92876 244 aa18.76■□□□□ 0.59
SHKBP1-202ENST00000593764 GDAP1L1Q96MZ0 367 aa18.76■□□□□ 0.59
SHKBP1-202ENST00000593764 CSPG4P5Q96PW8 444 aa18.76■□□□□ 0.59
SHKBP1-202ENST00000593764 DEF6Q9H4E7 631 aa18.76■□□□□ 0.59
SHKBP1-202ENST00000593764 NHEJ1Q9H9Q4 299 aaPredicted RBP18.76■□□□□ 0.59
SHKBP1-202ENST00000593764 PCDH18Q9HCL0 1135 aa18.76■□□□□ 0.59
SHKBP1-202ENST00000593764 UVRAGQ9P2Y5 699 aa18.76■□□□□ 0.59
SHKBP1-202ENST00000593764 UBA2Q9UBT2 640 aaPredicted RBP18.76■□□□□ 0.59
SHKBP1-202ENST00000593764 PCDHGB2Q9Y5G2 931 aa18.76■□□□□ 0.59
SHKBP1-202ENST00000593764 TPRP12270 2363 aaKnown RBP18.76■□□□□ 0.59
SHKBP1-202ENST00000593764 TRPM6Q9BX84 2022 aa18.76■□□□□ 0.59
SHKBP1-202ENST00000593764 H3BRJ5 948 aa18.75■□□□□ 0.59
SHKBP1-202ENST00000593764 INSIG1O15503 277 aa18.75■□□□□ 0.59
SHKBP1-202ENST00000593764 AP1G1O43747 822 aa18.75■□□□□ 0.59
SHKBP1-202ENST00000593764 CBFA2T3O75081 653 aa18.75■□□□□ 0.59
SHKBP1-202ENST00000593764 PCDH8O95206 1070 aa18.75■□□□□ 0.59
SHKBP1-202ENST00000593764 PRLRP16471 622 aa18.75■□□□□ 0.59
SHKBP1-202ENST00000593764 IL4RP24394 825 aa18.75■□□□□ 0.59
SHKBP1-202ENST00000593764 ARL4AP40617 200 aa18.75■□□□□ 0.59
SHKBP1-202ENST00000593764 TMEM259Q4ZIN3 620 aa18.75■□□□□ 0.59
SHKBP1-202ENST00000593764 SETMARQ53H47 684 aaPredicted RBP18.75■□□□□ 0.59
SHKBP1-202ENST00000593764 PRAMEF14Q5SWL7 426 aa18.75■□□□□ 0.59
SHKBP1-202ENST00000593764 SEL1L3Q68CR1 1132 aa18.75■□□□□ 0.59
SHKBP1-202ENST00000593764 NAXDQ8IW45 347 aa18.75■□□□□ 0.59
SHKBP1-202ENST00000593764 LZTR1Q8N653 840 aa18.75■□□□□ 0.59
SHKBP1-202ENST00000593764 TMEM145Q8NBT3 493 aa18.75■□□□□ 0.59
SHKBP1-202ENST00000593764 FAM71BQ8TC56 605 aa18.75■□□□□ 0.59
SHKBP1-202ENST00000593764 CTNNBL1Q8WYA6 563 aaPredicted RBP18.75■□□□□ 0.59
SHKBP1-202ENST00000593764 KLHL32Q96NJ5 620 aa18.75■□□□□ 0.59
SHKBP1-202ENST00000593764 OSBPL1AQ9BXW6 950 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms