RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 PTCH2Q9Y6C5 1203 aa12.54□□□□□ -0.4
PDE4A-207ENST00000590407 ARHGAP10A1A4S6 786 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 NEMP1O14524 444 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 VAPBO95292 243 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 SNAI1O95863 264 aaPredicted RBP12.53□□□□□ -0.4
PDE4A-207ENST00000590407 PGK1P00558 417 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 CD1EP15812 388 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 STMN1P16949 149 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 AKAP5P24588 427 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 CCNCP24863 283 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 NR1H2P55055 460 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 INHBCP55103 352 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 TXNL4AP83876 142 aaKnown RBP12.53□□□□□ -0.4
PDE4A-207ENST00000590407 POU4F1Q01851 419 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 SQLEQ14534 574 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 SMAD1Q15797 465 aaKnown RBP12.53□□□□□ -0.4
PDE4A-207ENST00000590407 TSTD2Q5T7W7 516 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 KIAA0408Q6ZU52 694 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 BEND5Q7L4P6 421 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 TMEM86AQ8N2M4 240 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 AFAP1L2Q8N4X5 818 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 CATSPER2Q96P56 530 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 IL12RB2Q99665 862 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 TBL1YQ9BQ87 522 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 COLEC11Q9BWP8 271 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 FTHL17Q9BXU8 183 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 CLIC5Q9NZA1 410 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 XPR1Q9UBH6 696 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 GNEQ9Y223 722 aaKnown RBP12.53□□□□□ -0.4
PDE4A-207ENST00000590407 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.53□□□□□ -0.4
PDE4A-207ENST00000590407 SYNJ2BP-COX16A0A087WUM0 186 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 YJEFN3A6XGL0 299 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 CLDN5O00501 218 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 PHGDHO43175 533 aaKnown RBP12.53□□□□□ -0.4
PDE4A-207ENST00000590407 TMCC1O94876 653 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 JCHAINP01591 159 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 ENO3P13929 434 aaPredicted RBP12.53□□□□□ -0.4
PDE4A-207ENST00000590407 ZNF26P17031 533 aaPredicted RBP12.53□□□□□ -0.4
PDE4A-207ENST00000590407 ABCG1P45844 678 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 ATP4BP51164 291 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 ILF2Q12905 390 aaKnown RBP12.53□□□□□ -0.4
PDE4A-207ENST00000590407 TRIM25Q14258 630 aaKnown RBP12.53□□□□□ -0.4
PDE4A-207ENST00000590407 NADK2Q4G0N4 442 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 TMEM198Q66K66 360 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 KIAA0930Q6ICG6 404 aaPredicted RBP12.53□□□□□ -0.4
PDE4A-207ENST00000590407 BHLHA9Q7RTU4 235 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 GALNT7Q86SF2 657 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 SLC41A1Q8IVJ1 513 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 CHERPQ8IWX8 916 aaKnown RBP12.53□□□□□ -0.4
PDE4A-207ENST00000590407 C2CD4AQ8NCU7 369 aaPredicted RBP12.53□□□□□ -0.4
PDE4A-207ENST00000590407 GPRC5AQ8NFJ5 357 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 AGR3Q8TD06 166 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 EZH1Q92800 747 aaPredicted RBP12.53□□□□□ -0.4
PDE4A-207ENST00000590407 ZNF597Q96LX8 424 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 KLHL32Q96NJ5 620 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 OSMRQ99650 979 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 MRPL1Q9BYD6 325 aaKnown RBP12.53□□□□□ -0.4
PDE4A-207ENST00000590407 SUDS3Q9H7L9 328 aaPredicted RBP12.53□□□□□ -0.4
PDE4A-207ENST00000590407 COPS7BQ9H9Q2 264 aaPredicted RBP12.53□□□□□ -0.4
PDE4A-207ENST00000590407 MEAF6Q9HAF1 191 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 CDHR5Q9HBB8 845 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 DDIT4Q9NX09 232 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 COX16Q9P0S2 106 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 PHF24Q9UPV7 400 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 PCDHGA7Q9Y5G6 932 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 PLXNB2O15031 1838 aa12.53□□□□□ -0.4
PDE4A-207ENST00000590407 FAM95CA0A1B0GW59 222 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 ADM5C9JUS6 153 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 TRIM24O15164 1050 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 LRIG2O94898 1065 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 OR6B1O95007 311 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 PGM3O95394 542 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 AMHP03971 560 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 PAMP19021 973 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 ADRA1AP35348 466 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 LHX1P48742 406 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 GEMP55040 296 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 PKNOX1P55347 436 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 PSME3P61289 254 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 RHDQ02161 417 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 IRF5Q13568 498 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 PTK2BQ14289 1009 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 SLC14A2Q15849 920 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 WSCD1Q658N2 575 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 NXNQ6DKJ4 435 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 IQSEC1Q6DN90 963 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 DENND5AQ6IQ26 1287 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 RBM44Q6ZP01 1051 aaKnown RBP12.52□□□□□ -0.41
PDE4A-207ENST00000590407 FAM35AQ86V20 835 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 METTL25Q8N6Q8 603 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 PPHLN1Q8NEY8 458 aaKnown RBP12.52□□□□□ -0.41
PDE4A-207ENST00000590407 SMOQ99835 787 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 HAUS8Q9BT25 410 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 MED10Q9BTT4 135 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 TRIM62Q9BVG3 475 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 OSBPL11Q9BXB4 747 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 PRKD2Q9BZL6 878 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 FAM49AQ9H0Q0 323 aaPredicted RBP12.52□□□□□ -0.41
PDE4A-207ENST00000590407 TIMMDC1Q9NPL8 285 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 ENTPD7Q9NQZ7 604 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms