RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 CEP41Q9BYV8 373 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 USP29Q9HBJ7 922 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 SCUBE2Q9NQ36 999 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 SPATA6Q9NWH7 488 aaPredicted RBP13.82□□□□□ -0.2
VMP1-210ENST00000589823 IL36AQ9UHA7 158 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 ATP8A1Q9Y2Q0 1164 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 SHROOM3Q8TF72 1996 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 TCRBV21S2A2A0A5A6 115 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 CCDC188H7C350 402 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 PDE2AO00408 941 aaPredicted RBP13.81□□□□□ -0.2
VMP1-210ENST00000589823 MUSKO15146 869 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 POP4O95707 220 aaKnown RBP13.81□□□□□ -0.2
VMP1-210ENST00000589823 IFNB1P01574 187 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 CES1P23141 567 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 CHRNA3P32297 505 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 ACTN2P35609 894 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 COILP38432 576 aaPredicted RBP13.81□□□□□ -0.2
VMP1-210ENST00000589823 KCNJ1P48048 391 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 FNTAP49354 379 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 MAXP61244 160 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 AP1S1P61966 158 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 GRM3Q14832 879 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 MYLK3Q32MK0 819 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 RALGPS1Q5JS13 557 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 ZNF776Q68DI1 518 aaPredicted RBP13.81□□□□□ -0.2
VMP1-210ENST00000589823 ITPRIPL1Q6GPH6 555 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 CCDC137Q6PK04 289 aaKnown RBP13.81□□□□□ -0.2
VMP1-210ENST00000589823 TMEM92Q6UXU6 159 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 SRLQ86TD4 932 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 ZNF567Q8N184 647 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 PGBD5Q8N414 524 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.81□□□□□ -0.2
VMP1-210ENST00000589823 CNTD1Q8N815 330 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 TMEM105Q8N8V8 129 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 CCDC89Q8N998 374 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 CHST14Q8NCH0 376 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 TSTD1Q8NFU3 115 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 OR6K2Q8NGY2 324 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 GRK7Q8WTQ7 553 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 TEKT5Q96M29 485 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 RUNDC3BQ96NL0 473 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 NUDCD1Q96RS6 583 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 ZDHHC6Q9H6R6 413 aa13.81□□□□□ -0.2
VMP1-210ENST00000589823 POLR3BQ9NW08 1133 aaPredicted RBP13.81□□□□□ -0.2
VMP1-210ENST00000589823 FEZ2Q9UHY8 353 aaPredicted RBP13.81□□□□□ -0.2
VMP1-210ENST00000589823 EVLQ9UI08 416 aaPredicted RBP13.81□□□□□ -0.2
VMP1-210ENST00000589823 ATG2BQ96BY7 2078 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.8□□□□□ -0.2
VMP1-210ENST00000589823 C5orf60A6NFR6 353 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 C1QTNF3-AMACRE9PGA6 284 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 INSIG1O15503 277 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 LAMTOR5O43504 91 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 OPHN1O60890 802 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 PRNPP04156 253 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 RGRP47804 291 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 GDF10P55107 478 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 SATB1Q01826 763 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 ANKRD20A2Q5SQ80 823 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 ANKRD20A1Q5TYW2 823 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 ANKRD20A3Q5VUR7 823 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 FAM46CQ5VWP2 391 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 TTC27Q6P3X3 843 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 MAMSTRQ6ZN01 415 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 ARHGEF18Q6ZSZ5 1173 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 PGBD3Q8N328 593 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 DTWD2Q8NBA8 298 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 GRIN3AQ8TCU5 1115 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 PRCCQ92733 491 aaPredicted RBP13.8□□□□□ -0.2
VMP1-210ENST00000589823 RTP4Q96DX8 246 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 ZNF419Q96HQ0 510 aaPredicted RBP13.8□□□□□ -0.2
VMP1-210ENST00000589823 LRIG1Q96JA1 1093 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 SPATA13Q96N96 652 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 HHIPQ96QV1 700 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 TUBGCP5Q96RT8 1024 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 FAM129BQ96TA1 746 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 SEMA3CQ99985 751 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 C1QTNF1Q9BXJ1 281 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 RSPH9Q9H1X1 276 aaPredicted RBP13.8□□□□□ -0.2
VMP1-210ENST00000589823 ATP13A3Q9H7F0 1226 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 GLOD4Q9HC38 313 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 C2orf42Q9NWW7 574 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 BCCIPQ9P287 314 aaKnown RBP eCLIP13.8□□□□□ -0.2
VMP1-210ENST00000589823 RSPH14Q9UHP6 348 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 MRFAP1Q9Y605 127 aa13.8□□□□□ -0.2
VMP1-210ENST00000589823 PRR33A8MZF0 331 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 GPR37L1O60883 481 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 GCATO75600 419 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 LEFTY1O75610 366 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 PAPSS2O95340 614 aaPredicted RBP13.79□□□□□ -0.2
VMP1-210ENST00000589823 APBB3O95704 486 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 ADH1BP00325 375 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 IL1BP01584 269 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 DNTTP04053 509 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 SERPINF2P08697 491 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 ACADMP11310 421 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 NFKB1P19838 968 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 CR2P20023 1033 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 SERPINA4P29622 427 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 AVPR2P30518 371 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 COPAP53621 1224 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms