RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 PLEKHG6Q3KR16 790 aa11.56□□□□□ -0.56
SMAD4-205ENST00000588745 KBTBD12Q3ZCT8 623 aa11.56□□□□□ -0.56
SMAD4-205ENST00000588745 INO80DQ53TQ3 878 aaPredicted RBP11.56□□□□□ -0.56
SMAD4-205ENST00000588745 SPANXN3Q5MJ09 141 aa11.56□□□□□ -0.56
SMAD4-205ENST00000588745 CERCAMQ5T4B2 595 aa11.56□□□□□ -0.56
SMAD4-205ENST00000588745 ANKRD54Q6NXT1 300 aa11.56□□□□□ -0.56
SMAD4-205ENST00000588745 RANBP10Q6VN20 620 aa11.56□□□□□ -0.56
SMAD4-205ENST00000588745 KDM7AQ6ZMT4 941 aa11.56□□□□□ -0.56
SMAD4-205ENST00000588745 GET4Q7L5D6 327 aaPredicted RBP11.56□□□□□ -0.56
SMAD4-205ENST00000588745 APCDD1Q8J025 514 aa11.56□□□□□ -0.56
SMAD4-205ENST00000588745 KIAA1958Q8N8K9 716 aa11.56□□□□□ -0.56
SMAD4-205ENST00000588745 ZNF557Q8N988 423 aaPredicted RBP11.56□□□□□ -0.56
SMAD4-205ENST00000588745 IRF7Q92985 503 aa11.56□□□□□ -0.56
SMAD4-205ENST00000588745 ACDQ96AP0 544 aa11.56□□□□□ -0.56
SMAD4-205ENST00000588745 SPHK2Q9NRA0 654 aa11.56□□□□□ -0.56
SMAD4-205ENST00000588745 MARK1Q9P0L2 795 aa11.56□□□□□ -0.56
SMAD4-205ENST00000588745 WNT6Q9Y6F9 365 aa11.56□□□□□ -0.56
SMAD4-205ENST00000588745 CXorf51AA0A1B0GTR3 108 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 FAM237BA0A1B0GVD1 139 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 MAGEB16A2A368 324 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 TTC24A2A3L6 582 aaPredicted RBP11.55□□□□□ -0.56
SMAD4-205ENST00000588745 FAM159BA6NKW6 160 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 NEDD8-MDP1E9PL57 170 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 ATP9BO43861 1147 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 GJB3O75712 270 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 USP1O94782 785 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 ALDH1A2O94788 518 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 POLBP06746 335 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 SERPINF2P08697 491 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 TPH1P17752 444 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 HPDP32754 393 aaPredicted RBP11.55□□□□□ -0.56
SMAD4-205ENST00000588745 MSH2P43246 934 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 CHRNA4P43681 627 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 RGRP47804 291 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 PLK1P53350 603 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 GYS2P54840 703 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 FRG1Q14331 258 aaKnown RBP11.55□□□□□ -0.56
SMAD4-205ENST00000588745 RETSATQ6NUM9 610 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 TRMT10BQ6PF06 316 aaKnown RBP11.55□□□□□ -0.56
SMAD4-205ENST00000588745 SYCE2Q6PIF2 218 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 LINGO4Q6UY18 593 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 CYS1Q717R9 158 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 TMEM25Q86YD3 366 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 ARFGAP2Q8N6H7 521 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 DCAKDQ8WVC6 231 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 SLC44A1Q8WWI5 657 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 FGF13Q92913 245 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 SMARCD2Q92925 531 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 ZNF669Q96BR6 464 aaPredicted RBP11.55□□□□□ -0.56
SMAD4-205ENST00000588745 RSPRY1Q96DX4 576 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 FEM1CQ96JP0 617 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 EXOC2Q96KP1 924 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 LMLNQ96KR4 655 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 ASB16Q96NS5 453 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 NUDCD1Q96RS6 583 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 APOL5Q9BWW9 433 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 BBS2Q9BXC9 721 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 PRO3102Q9H379 93 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 ARNT2Q9HBZ2 717 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 MOCS1Q9NZB8 636 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 LHX3Q9UBR4 397 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 TBK1Q9UHD2 729 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 SOX13Q9UN79 622 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 RPS6KL1Q9Y6S9 549 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 LAMA3Q16787 3333 aa11.55□□□□□ -0.56
SMAD4-205ENST00000588745 LOC285095A0A1B0GVY8 99 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 INSIG1O15503 277 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 INHBAP08476 426 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 ATXN1LP0C7T5 689 aaKnown RBP11.54□□□□□ -0.56
SMAD4-205ENST00000588745 TYRP14679 529 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 CES1P23141 567 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 HLA-FP30511 346 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 SERPINH1P50454 418 aaKnown RBP11.54□□□□□ -0.56
SMAD4-205ENST00000588745 RHOAP61586 193 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 PPP2R2AP63151 447 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 NR1H3Q13133 447 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 NAB1Q13506 487 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 PITRM1Q5JRX3 1037 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 FAM78AQ5JUQ0 283 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 PCID2Q5JVF3 399 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 LY6G5CQ5SRR4 150 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 EMC10Q5UCC4 262 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 ARMC3Q5W041 872 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 ZNF449Q6P9G9 518 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 ADGRD1Q6QNK2 874 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 CHRDL2Q6WN34 429 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 TAOK1Q7L7X3 1001 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 TMEM135Q86UB9 458 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 LRRC6Q86X45 466 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 CYP4X1Q8N118 509 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 SLC25A41Q8N5S1 370 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 PPM1NQ8N819 430 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.54□□□□□ -0.56
SMAD4-205ENST00000588745 PPHLN1Q8NEY8 458 aaKnown RBP11.54□□□□□ -0.56
SMAD4-205ENST00000588745 PTCD2Q8WV60 388 aaKnown RBP11.54□□□□□ -0.56
SMAD4-205ENST00000588745 OSCP1Q8WVF1 389 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 TTC17Q96AE7 1141 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 MRRFQ96E11 262 aaKnown RBP11.54□□□□□ -0.56
SMAD4-205ENST00000588745 IFT43Q96FT9 208 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 KIFC1Q9BW19 673 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms