RNA–Protein interactions for RNA: ENST00000583066.5

NDEL1-216, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5

Gene NDEL1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-216ENST00000583066 FAM118BQ9BPY3 351 aa6.74□□□□□ -1.33
NDEL1-216ENST00000583066 IER2Q9BTL4 223 aa6.74□□□□□ -1.33
NDEL1-216ENST00000583066 TRIM62Q9BVG3 475 aa6.74□□□□□ -1.33
NDEL1-216ENST00000583066 MRPL9Q9BYD2 267 aaKnown RBP6.74□□□□□ -1.33
NDEL1-216ENST00000583066 TRIM6Q9C030 488 aaPredicted RBP6.74□□□□□ -1.33
NDEL1-216ENST00000583066 CCDC86Q9H6F5 360 aaKnown RBP6.74□□□□□ -1.33
NDEL1-216ENST00000583066 USP29Q9HBJ7 922 aa6.74□□□□□ -1.33
NDEL1-216ENST00000583066 PCDH18Q9HCL0 1135 aa6.74□□□□□ -1.33
NDEL1-216ENST00000583066 EIF2B3Q9NR50 452 aaKnown RBP6.74□□□□□ -1.33
NDEL1-216ENST00000583066 MRPL17Q9NRX2 175 aaKnown RBP6.74□□□□□ -1.33
NDEL1-216ENST00000583066 SLC38A7Q9NVC3 462 aa6.74□□□□□ -1.33
NDEL1-216ENST00000583066 DNAJC17Q9NVM6 304 aaKnown RBP6.74□□□□□ -1.33
NDEL1-216ENST00000583066 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.74□□□□□ -1.33
NDEL1-216ENST00000583066 CTNNAL1Q9UBT7 734 aa6.74□□□□□ -1.33
NDEL1-216ENST00000583066 PHTF1Q9UMS5 762 aa6.74□□□□□ -1.33
NDEL1-216ENST00000583066 INPP5FQ9Y2H2 1132 aa6.74□□□□□ -1.33
NDEL1-216ENST00000583066 MTO1Q9Y2Z2 717 aaKnown RBP6.74□□□□□ -1.33
NDEL1-216ENST00000583066 PCDHGA5Q9Y5G8 931 aa6.74□□□□□ -1.33
NDEL1-216ENST00000583066 SNX9Q9Y5X1 595 aa6.74□□□□□ -1.33
NDEL1-216ENST00000583066 ZFP37Q9Y6Q3 630 aaPredicted RBP6.74□□□□□ -1.33
NDEL1-216ENST00000583066 MGAQ8IWI9 3026 aa6.74□□□□□ -1.33
NDEL1-216ENST00000583066 MUC22E2RYF6 1773 aaPredicted RBP6.74□□□□□ -1.33
NDEL1-216ENST00000583066 VWA8A3KMH1 1905 aa6.74□□□□□ -1.33
NDEL1-216ENST00000583066 ITPR3Q14573 2671 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 A8MXQ7 604 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 KPNA7A9QM74 516 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 TMEM229AB2RXF0 380 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 F8W810 466 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 H3BM21 787 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 H3BRJ5 948 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 XPO1O14980 1071 aaKnown RBP6.73□□□□□ -1.33
NDEL1-216ENST00000583066 BIRC5O15392 142 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 KCNN4O15554 427 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 TGM5O43548 720 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 OPHN1O60890 802 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 HUS1O60921 280 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 UBOX5O94941 541 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 UNC5CO95185 931 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 RPL17P18621 184 aaKnown RBP6.73□□□□□ -1.33
NDEL1-216ENST00000583066 CCND1P24385 295 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 IL4RP24394 825 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 LRPAP1P30533 357 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 L1CAMP32004 1257 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 FOXN2P32314 431 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 RPA3P35244 121 aaPredicted RBP6.73□□□□□ -1.33
NDEL1-216ENST00000583066 ARL4AP40617 200 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 ELK3P41970 407 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 MATKP42679 507 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 MAGEA3P43357 314 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 HCAR3P49019 387 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 AFF1P51825 1210 aaKnown RBP6.73□□□□□ -1.33
NDEL1-216ENST00000583066 ELF3P78545 371 aaPredicted RBP6.73□□□□□ -1.33
NDEL1-216ENST00000583066 ATP11AP98196 1134 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 CREB5Q02930 508 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 SEMA5AQ13591 1074 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 SLC25A52Q3SY17 297 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 BBS9Q3SYG4 887 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 PLK5Q496M5 336 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 FNBP1LQ5T0N5 605 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 UBAP2Q5T6F2 1119 aaKnown RBP6.73□□□□□ -1.33
NDEL1-216ENST00000583066 ATG16L1Q676U5 607 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 PMF1Q6P1K2 205 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 PKN3Q6P5Z2 889 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 TIFABQ6ZNK6 161 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 CYP4V2Q6ZWL3 525 aaPredicted RBP6.73□□□□□ -1.33
NDEL1-216ENST00000583066 ASRGL1Q7L266 308 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 PRICKLE2Q7Z3G6 844 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 RAB44Q7Z6P3 723 aaPredicted RBP6.73□□□□□ -1.33
NDEL1-216ENST00000583066 ACOT1Q86TX2 421 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 TMEM86AQ8N2M4 240 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 APPL2Q8NEU8 664 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 OR6B3Q8NGW1 331 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 PCDH19Q8TAB3 1148 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 GDAP1Q8TB36 358 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 MZB1Q8WU39 189 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 FAM3CQ92520 227 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 ZNF75CPQ92670 426 aaPredicted RBP6.73□□□□□ -1.33
NDEL1-216ENST00000583066 C18orf25Q96B23 403 aaPredicted RBP6.73□□□□□ -1.33
NDEL1-216ENST00000583066 KLHL29Q96CT2 875 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 APOPT1Q96IL0 206 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 ZNF668Q96K58 619 aaPredicted RBP6.73□□□□□ -1.33
NDEL1-216ENST00000583066 PWWP2AQ96N64 755 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 PPP1R2P1Q96PQ5 205 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 QKIQ96PU8 341 aaKnown RBP eCLIP6.73□□□□□ -1.33
NDEL1-216ENST00000583066 IQCGQ9H095 443 aaKnown RBP6.73□□□□□ -1.33
NDEL1-216ENST00000583066 LRMDAQ9H2I8 198 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 FAM96AQ9H5X1 160 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 ECT2Q9H8V3 914 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 TMEM9BQ9NQ34 198 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 CHST12Q9NRB3 414 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 HCFC1R1Q9NWW0 138 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 MARCH5Q9NX47 278 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 ZDHHC7Q9NXF8 308 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 SNTG2Q9NY99 539 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 ZC3H7BQ9UGR2 993 aaKnown RBP6.73□□□□□ -1.33
NDEL1-216ENST00000583066 HMGXB4Q9UGU5 601 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 STAP1Q9ULZ2 295 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 PIAS3Q9Y6X2 628 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 TSC2P49815 1807 aa6.73□□□□□ -1.33
NDEL1-216ENST00000583066 THADAQ6YHU6 1953 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms