RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 RABEPKQ7Z6M1 372 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 ZSCAN30Q86W11 494 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 CACUL1Q86Y37 369 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 PLPP6Q8IY26 295 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 RGL4Q8IZJ4 473 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 PQLC3Q8N755 202 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 CADM4Q8NFZ8 388 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 FOXJ1Q92949 421 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 HMCESQ96FZ2 354 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 ZNF830Q96NB3 372 aaPredicted RBP10.07□□□□□ -0.8
GGA3-209ENST00000580646 ZNF599Q96NL3 588 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 MAK16Q9BXY0 300 aaKnown RBP10.07□□□□□ -0.8
GGA3-209ENST00000580646 SLC39A8Q9C0K1 460 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 TSPYL1Q9H0U9 437 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 PDFQ9HBH1 243 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 ETNK2Q9NVF9 386 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 KLHL11Q9NVR0 708 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 hCG_1818297A0A087WSY0 165 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 CBX4O00257 560 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 APOL1O14791 398 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 DDX3YO15523 660 aaKnown RBP10.06□□□□□ -0.8
GGA3-209ENST00000580646 SNAP91O60641 907 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 PRAMEF11O60813 436 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 CD160O95971 181 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 CFIP05156 583 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 ADRB1P08588 477 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 ENGP17813 658 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 MX2P20592 715 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 TGM2P21980 687 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 KCNA4P22459 653 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 MAOBP27338 520 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 MARCKSL1P49006 195 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 PAPOLAP51003 745 aaKnown RBP10.06□□□□□ -0.8
GGA3-209ENST00000580646 RPS14P62263 151 aaKnown RBP10.06□□□□□ -0.8
GGA3-209ENST00000580646 ZBTB16Q05516 673 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 IL10RBQ08334 325 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 GALNT2Q10471 571 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 TIGD7Q6NT04 549 aaPredicted RBP10.06□□□□□ -0.8
GGA3-209ENST00000580646 FAM124AQ86V42 546 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 PCDH20Q8N6Y1 951 aaKnown RBP10.06□□□□□ -0.8
GGA3-209ENST00000580646 PLD5Q8N7P1 536 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 ATP11CQ8NB49 1132 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.06□□□□□ -0.8
GGA3-209ENST00000580646 FRS2Q8WU20 508 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 DNASE2BQ8WZ79 361 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 PTPRN2Q92932 1015 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 RNF25Q96BH1 459 aaPredicted RBP10.06□□□□□ -0.8
GGA3-209ENST00000580646 HDAC11Q96DB2 347 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 RPL10LQ96L21 214 aaKnown RBP10.06□□□□□ -0.8
GGA3-209ENST00000580646 CCDC114Q96M63 670 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 TSGA13Q96PP4 275 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 SPON2Q9BUD6 331 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 BRD8Q9H0E9 1235 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 CARD9Q9H257 536 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 MTG2Q9H4K7 406 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 CAPN10Q9HC96 672 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 SLCO3A1Q9UIG8 710 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 SCML1Q9UN30 329 aa10.06□□□□□ -0.8
GGA3-209ENST00000580646 CNOT1A5YKK6 2376 aaKnown RBP10.06□□□□□ -0.8
GGA3-209ENST00000580646 METTL12A8MUP2 240 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 MEI4A8MW99 385 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 APOC4-APOC2K7ER74 178 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 MFSD11O43934 449 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 SIN3BO75182 1162 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 ZNF189O75820 626 aaPredicted RBP10.05□□□□□ -0.8
GGA3-209ENST00000580646 KCNK5O95279 499 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 FTCDO95954 541 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 GSRP00390 522 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 APOC2P02655 101 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 DNTTP04053 509 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 TNNT1P13805 278 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 GNSP15586 552 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 GLDCP23378 1020 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 CCNCP24863 283 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 GARSP41250 739 aaKnown RBP10.05□□□□□ -0.8
GGA3-209ENST00000580646 MAPK8P45983 427 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 STK19P49842 368 aaPredicted RBP10.05□□□□□ -0.8
GGA3-209ENST00000580646 ATXN3P54252 364 aaPredicted RBP10.05□□□□□ -0.8
GGA3-209ENST00000580646 ELAVL3Q14576 367 aaKnown RBP10.05□□□□□ -0.8
GGA3-209ENST00000580646 DLG2Q15700 870 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 UAP1L1Q3KQV9 507 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 C9orf64Q5T6V5 341 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 ZNF776Q68DI1 518 aaPredicted RBP10.05□□□□□ -0.8
GGA3-209ENST00000580646 C22orf39Q6P5X5 142 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 BBS12Q6ZW61 710 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 CCDC50Q8IVM0 306 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 ATPAF2Q8N5M1 289 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 ALG3Q92685 438 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 CELF6Q96J87 481 aaKnown RBP10.05□□□□□ -0.8
GGA3-209ENST00000580646 OLFM3Q96PB7 478 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 OSBPL8Q9BZF1 889 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 RSPH9Q9H1X1 276 aaPredicted RBP10.05□□□□□ -0.8
GGA3-209ENST00000580646 FSCN3Q9NQT6 498 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 DTLQ9NZJ0 730 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 UBA2Q9UBT2 640 aaPredicted RBP10.05□□□□□ -0.8
GGA3-209ENST00000580646 SUSD2Q9UGT4 822 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 AMACRQ9UHK6 382 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 IPO11Q9UI26 975 aaKnown RBP10.05□□□□□ -0.8
GGA3-209ENST00000580646 JRKLQ9Y4A0 524 aa10.05□□□□□ -0.8
GGA3-209ENST00000580646 MFHAS1Q9Y4C4 1052 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms