RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 CINPQ9BW66 212 aaPredicted RBP19.81■□□□□ 0.76
SS18-209ENST00000578595 AASDHPPTQ9NRN7 309 aa19.81■□□□□ 0.76
SS18-209ENST00000578595 INTUQ9ULD6 942 aa19.81■□□□□ 0.76
SS18-209ENST00000578595 WASF2Q9Y6W5 498 aa19.81■□□□□ 0.76
SS18-209ENST00000578595 CXorf51AA0A1B0GTR3 108 aa19.8■□□□□ 0.76
SS18-209ENST00000578595 DCDC2BA2VCK2 349 aa19.8■□□□□ 0.76
SS18-209ENST00000578595 SOWAHDA6NJG2 315 aa19.8■□□□□ 0.76
SS18-209ENST00000578595 SLC30A4O14863 429 aa19.8■□□□□ 0.76
SS18-209ENST00000578595 PLRG1O43660 514 aaKnown RBP19.8■□□□□ 0.76
SS18-209ENST00000578595 PRAMEF11O60813 436 aa19.8■□□□□ 0.76
SS18-209ENST00000578595 PALMO75781 387 aa19.8■□□□□ 0.76
SS18-209ENST00000578595 UGT2B4P06133 528 aa19.8■□□□□ 0.76
SS18-209ENST00000578595 CD27P26842 260 aa19.8■□□□□ 0.76
SS18-209ENST00000578595 NEK3P51956 506 aa19.8■□□□□ 0.76
SS18-209ENST00000578595 PPP2CBP62714 309 aa19.8■□□□□ 0.76
SS18-209ENST00000578595 PPP2CAP67775 309 aa19.8■□□□□ 0.76
SS18-209ENST00000578595 ERN2Q76MJ5 926 aaKnown RBP19.8■□□□□ 0.76
SS18-209ENST00000578595 DGLUCYQ7Z3D6 616 aa19.8■□□□□ 0.76
SS18-209ENST00000578595 ATPAF2Q8N5M1 289 aa19.8■□□□□ 0.76
SS18-209ENST00000578595 OR2I1PQ8NGU4 316 aa19.8■□□□□ 0.76
SS18-209ENST00000578595 CAPN10Q9HC96 672 aa19.8■□□□□ 0.76
SS18-209ENST00000578595 ETNK2Q9NVF9 386 aa19.8■□□□□ 0.76
SS18-209ENST00000578595 ARHGAP33O14559 1287 aa19.79■□□□□ 0.76
SS18-209ENST00000578595 SPOPO43791 374 aa19.79■□□□□ 0.76
SS18-209ENST00000578595 PCDH8O95206 1070 aa19.79■□□□□ 0.76
SS18-209ENST00000578595 POP4O95707 220 aaKnown RBP19.79■□□□□ 0.76
SS18-209ENST00000578595 IGHV4-34P06331 123 aa19.79■□□□□ 0.76
SS18-209ENST00000578595 CD48P09326 243 aa19.79■□□□□ 0.76
SS18-209ENST00000578595 INO80DQ53TQ3 878 aaPredicted RBP19.79■□□□□ 0.76
SS18-209ENST00000578595 CFAP58Q5T655 872 aa19.79■□□□□ 0.76
SS18-209ENST00000578595 PIP5KL1Q5T9C9 394 aa19.79■□□□□ 0.76
SS18-209ENST00000578595 LAYNQ6UX15 382 aa19.79■□□□□ 0.76
SS18-209ENST00000578595 ARHGAP36Q6ZRI8 547 aa19.79■□□□□ 0.76
SS18-209ENST00000578595 PRPF39Q86UA1 669 aaKnown RBP19.79■□□□□ 0.76
SS18-209ENST00000578595 TMTC1Q8IUR5 882 aa19.79■□□□□ 0.76
SS18-209ENST00000578595 MAP7D3Q8IWC1 876 aa19.79■□□□□ 0.76
SS18-209ENST00000578595 ARHGAP12Q8IWW6 846 aa19.79■□□□□ 0.76
SS18-209ENST00000578595 MINDY1Q8N5J2 469 aa19.79■□□□□ 0.76
SS18-209ENST00000578595 TM9SF3Q9HD45 589 aa19.79■□□□□ 0.76
SS18-209ENST00000578595 DLL3Q9NYJ7 618 aa19.79■□□□□ 0.76
SS18-209ENST00000578595 IPO11Q9UI26 975 aaKnown RBP19.79■□□□□ 0.76
SS18-209ENST00000578595 PCDHA13Q9Y5I0 950 aa19.79■□□□□ 0.76
SS18-209ENST00000578595 SLCO1B1Q9Y6L6 691 aa19.79■□□□□ 0.76
SS18-209ENST00000578595 CABIN1Q9Y6J0 2220 aa19.79■□□□□ 0.76
SS18-209ENST00000578595 LRRK1Q38SD2 2015 aa19.78■□□□□ 0.76
SS18-209ENST00000578595 A0A1B0GVT2 93 aa19.78■□□□□ 0.76
SS18-209ENST00000578595 LRRD1A4D1F6 860 aa19.78■□□□□ 0.76
SS18-209ENST00000578595 RNF103O00237 685 aa19.78■□□□□ 0.76
SS18-209ENST00000578595 NEMP1O14524 444 aa19.78■□□□□ 0.76
SS18-209ENST00000578595 KRT1P04264 644 aa19.78■□□□□ 0.76
SS18-209ENST00000578595 XPAP23025 273 aaPredicted RBP19.78■□□□□ 0.76
SS18-209ENST00000578595 ITGB7P26010 798 aa19.78■□□□□ 0.76
SS18-209ENST00000578595 ARHGAP25P42331 645 aa19.78■□□□□ 0.76
SS18-209ENST00000578595 CSNK1EP49674 416 aaKnown RBP19.78■□□□□ 0.76
SS18-209ENST00000578595 AFF3P51826 1226 aaKnown RBP19.78■□□□□ 0.76
SS18-209ENST00000578595 LIMK1P53667 647 aa19.78■□□□□ 0.76
SS18-209ENST00000578595 GRIK2Q13002 908 aa19.78■□□□□ 0.76
SS18-209ENST00000578595 DPYSL3Q14195 570 aa19.78■□□□□ 0.76
SS18-209ENST00000578595 ZNF235Q14590 738 aa19.78■□□□□ 0.76
SS18-209ENST00000578595 PDK2Q15119 407 aa19.78■□□□□ 0.76
SS18-209ENST00000578595 MYLK3Q32MK0 819 aa19.78■□□□□ 0.76
SS18-209ENST00000578595 PARS2Q7L3T8 475 aaKnown RBP19.78■□□□□ 0.76
SS18-209ENST00000578595 TP53INP2Q8IXH6 220 aa19.78■□□□□ 0.76
SS18-209ENST00000578595 NSMCE1Q8WV22 266 aa19.78■□□□□ 0.76
SS18-209ENST00000578595 KLK6Q92876 244 aa19.78■□□□□ 0.76
SS18-209ENST00000578595 SLC6A18Q96N87 628 aa19.78■□□□□ 0.76
SS18-209ENST00000578595 KLHL32Q96NJ5 620 aa19.78■□□□□ 0.76
SS18-209ENST00000578595 MYOCQ99972 504 aa19.78■□□□□ 0.76
SS18-209ENST00000578595 KDM4CQ9H3R0 1056 aa19.78■□□□□ 0.76
SS18-209ENST00000578595 PREBQ9HCU5 417 aa19.78■□□□□ 0.76
SS18-209ENST00000578595 RCOR3Q9P2K3 495 aaPredicted RBP19.78■□□□□ 0.76
SS18-209ENST00000578595 LHX3Q9UBR4 397 aa19.78■□□□□ 0.76
SS18-209ENST00000578595 TFR2Q9UP52 801 aa19.78■□□□□ 0.76
SS18-209ENST00000578595 HYOU1Q9Y4L1 999 aa19.78■□□□□ 0.76
SS18-209ENST00000578595 TDRD6O60522 2096 aaKnown RBP19.78■□□□□ 0.76
SS18-209ENST00000578595 A0A1W2PPC4 97 aa19.77■□□□□ 0.76
SS18-209ENST00000578595 RNGTTO60942 597 aaKnown RBP19.77■□□□□ 0.76
SS18-209ENST00000578595 ADRB3P13945 408 aa19.77■□□□□ 0.76
SS18-209ENST00000578595 CCR5P51681 352 aa19.77■□□□□ 0.76
SS18-209ENST00000578595 NAP1L1P55209 391 aaKnown RBP19.77■□□□□ 0.76
SS18-209ENST00000578595 C21orf59P57076 290 aa19.77■□□□□ 0.76
SS18-209ENST00000578595 IL10RBQ08334 325 aa19.77■□□□□ 0.76
SS18-209ENST00000578595 CYTH1Q15438 398 aa19.77■□□□□ 0.76
SS18-209ENST00000578595 GDPD4Q6W3E5 623 aa19.77■□□□□ 0.76
SS18-209ENST00000578595 PLPP6Q8IY26 295 aa19.77■□□□□ 0.76
SS18-209ENST00000578595 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.77■□□□□ 0.76
SS18-209ENST00000578595 SERAC1Q96JX3 654 aa19.77■□□□□ 0.76
SS18-209ENST00000578595 ZNF670Q9BS34 389 aa19.77■□□□□ 0.76
SS18-209ENST00000578595 OSBPL1AQ9BXW6 950 aa19.77■□□□□ 0.76
SS18-209ENST00000578595 PDFQ9HBH1 243 aa19.77■□□□□ 0.76
SS18-209ENST00000578595 EPN1Q9Y6I3 576 aaPredicted RBP19.77■□□□□ 0.76
SS18-209ENST00000578595 LAMA1P25391 3075 aa19.77■□□□□ 0.76
SS18-209ENST00000578595 OPHN1O60890 802 aa19.76■□□□□ 0.75
SS18-209ENST00000578595 MTA2O94776 668 aa19.76■□□□□ 0.75
SS18-209ENST00000578595 NDUFA10O95299 355 aa19.76■□□□□ 0.75
SS18-209ENST00000578595 CDC25BP30305 580 aa19.76■□□□□ 0.75
SS18-209ENST00000578595 SETMARQ53H47 684 aaPredicted RBP19.76■□□□□ 0.75
SS18-209ENST00000578595 ANKRD20A8PQ5CZ79 823 aa19.76■□□□□ 0.75
SS18-209ENST00000578595 ZNF805Q5CZA5 627 aa19.76■□□□□ 0.75
SS18-209ENST00000578595 LRRC73Q5JTD7 316 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms