RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 LGMNQ99538 433 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 P2RY13Q9BPV8 354 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 AP1M1Q9BXS5 423 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 MUC3BQ9H195 1237 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 FBRSL1Q9HCM7 1045 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 ELOVL2Q9NXB9 296 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 SMARCAL1Q9NZC9 954 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 VPS51Q9UID3 782 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 KIAA1549LQ6ZVL6 1849 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 CELSR3Q9NYQ7 3312 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 MYO18BQ8IUG5 2567 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 USP9XQ93008 2570 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 EIF4E1BA6NMX2 242 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 PRRT4C9JH25 899 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 J3KR12 359 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 K7EQS6 105 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 TRIM24O15164 1050 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ATP9BO43861 1147 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 KAT7O95251 611 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ATP5BP06576 529 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 DLDP09622 509 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CCNB1P14635 433 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 RBL1P28749 1068 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 PTGIRP43119 386 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CSNK1DP48730 415 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CCR3P51677 355 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ECT2LQ008S8 904 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 MESP2Q0VG99 397 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 WASHC5Q12768 1159 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 DHX34Q14147 1143 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 DNTTIP2Q5QJE6 756 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 PLA2G2CQ5R387 149 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 MBLAC2Q68D91 279 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 TTC27Q6P3X3 843 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CCDC137Q6PK04 289 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ARHGAP36Q6ZRI8 547 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SYDE1Q6ZW31 735 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ADAT2Q7Z6V5 191 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ZC3H18Q86VM9 953 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CDKL3Q8IVW4 592 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ATPAF2Q8N5M1 289 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ALLCQ8N6M5 410 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 BHMTQ93088 406 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 MYO19Q96H55 970 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 MRGPRX3Q96LB0 322 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 PSKH2Q96QS6 385 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 FERMT1Q9BQL6 677 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CEP44Q9C0F1 390 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ATP13A1Q9HD20 1204 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 HEBP1Q9NRV9 189 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 RBM12Q9NTZ6 932 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 VPS28Q9UK41 221 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 TRHDEQ9UKU6 1024 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ATP8A1Q9Y2Q0 1164 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 MRPS17Q9Y2R5 130 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 PIAS3Q9Y6X2 628 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 TICRRQ7Z2Z1 1910 aa11.33□□□□□ -0.6
CDK5RAP3-204ENST00000577664 F5P12259 2224 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 KALRNO60229 2985 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 NYNRINQ9P2P1 1898 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 HECTD1Q9ULT8 2610 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CTAGE15A4D2H0 777 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 FAM221BA6H8Z2 402 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 BHMG1C9JSJ3 638 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 H7C0C1 242 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 DFFAO00273 331 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ZNF821O75541 412 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 PAPSS2O95340 614 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 APODP05090 189 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CTAGE8P0CG41 777 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CEACAM1P13688 526 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 VAV1P15498 845 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 POLR2EP19388 210 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CES1P23141 567 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 HSPA9P38646 679 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 KIR2DL1P43626 348 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ATP5OP48047 213 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 C19orf57Q0VDD7 668 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 PTPRNQ16849 979 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 COL28A1Q2UY09 1125 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 P3H1Q32P28 736 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 HSF5Q4G112 596 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 FBXO43Q4G163 708 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 GLE1Q53GS7 698 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 RALGPS1Q5JS13 557 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 MARC1Q5VT66 337 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 HEATR6Q6AI08 1181 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 DARS2Q6PI48 645 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 TXNDC11Q6PKC3 985 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 C19orf48Q6RUI8 117 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ZNF852Q6ZMS4 543 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CTAGE6Q86UF2 777 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CTAGE4Q8IX94 777 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SYNPOQ8N3V7 929 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SH2D3CQ8N5H7 860 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CNTD1Q8N815 330 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CCNYQ8ND76 341 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CCDC26Q8TAB7 109 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 GRK7Q8WTQ7 553 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ATG4AQ8WYN0 398 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms