RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 CCNB1P14635 433 aa12.56□□□□□ -0.4
RARA-208ENST00000577646 PRLRP16471 622 aa12.56□□□□□ -0.4
RARA-208ENST00000577646 MMP13P45452 471 aa12.56□□□□□ -0.4
RARA-208ENST00000577646 DNA2P51530 1060 aa12.56□□□□□ -0.4
RARA-208ENST00000577646 CCNHP51946 323 aaPredicted RBP12.56□□□□□ -0.4
RARA-208ENST00000577646 IFI35P80217 286 aaPredicted RBP12.56□□□□□ -0.4
RARA-208ENST00000577646 ZNF235Q14590 738 aa12.56□□□□□ -0.4
RARA-208ENST00000577646 MAP7D1Q3KQU3 841 aa12.56□□□□□ -0.4
RARA-208ENST00000577646 ZNF569Q5MCW4 686 aa12.56□□□□□ -0.4
RARA-208ENST00000577646 KAZNQ674X7 775 aa12.56□□□□□ -0.4
RARA-208ENST00000577646 ALG1LQ6GMV1 187 aa12.56□□□□□ -0.4
RARA-208ENST00000577646 TSSK4Q6SA08 328 aa12.56□□□□□ -0.4
RARA-208ENST00000577646 DPY19L3Q6ZPD9 716 aa12.56□□□□□ -0.4
RARA-208ENST00000577646 CADM4Q8NFZ8 388 aa12.56□□□□□ -0.4
RARA-208ENST00000577646 TFB1MQ8WVM0 346 aaKnown RBP12.56□□□□□ -0.4
RARA-208ENST00000577646 SPOCK2Q92563 424 aa12.56□□□□□ -0.4
RARA-208ENST00000577646 RAB7BQ96AH8 199 aa12.56□□□□□ -0.4
RARA-208ENST00000577646 FAM131CQ96AQ9 280 aa12.56□□□□□ -0.4
RARA-208ENST00000577646 LOXL4Q96JB6 756 aa12.56□□□□□ -0.4
RARA-208ENST00000577646 NAP1L3Q99457 506 aaPredicted RBP12.56□□□□□ -0.4
RARA-208ENST00000577646 HDAC8Q9BY41 377 aa12.56□□□□□ -0.4
RARA-208ENST00000577646 PABPC3Q9H361 631 aaKnown RBP12.56□□□□□ -0.4
RARA-208ENST00000577646 DYRK4Q9NR20 520 aa12.56□□□□□ -0.4
RARA-208ENST00000577646 TRMT1Q9NXH9 659 aaKnown RBP12.56□□□□□ -0.4
RARA-208ENST00000577646 DKK3Q9UBP4 350 aa12.56□□□□□ -0.4
RARA-208ENST00000577646 LHX3Q9UBR4 397 aa12.56□□□□□ -0.4
RARA-208ENST00000577646 FCF1Q9Y324 198 aaKnown RBP12.56□□□□□ -0.4
RARA-208ENST00000577646 ATG2BQ96BY7 2078 aa12.56□□□□□ -0.4
RARA-208ENST00000577646 FAM186AA6NE01 2351 aa12.56□□□□□ -0.4
RARA-208ENST00000577646 EP300Q09472 2414 aaPredicted RBP12.56□□□□□ -0.4
RARA-208ENST00000577646 GVINP1Q7Z2Y8 2422 aa12.55□□□□□ -0.4
RARA-208ENST00000577646 KCNK3O14649 394 aa12.55□□□□□ -0.4
RARA-208ENST00000577646 RHOBTB1O94844 696 aa12.55□□□□□ -0.4
RARA-208ENST00000577646 TUBB4AP04350 444 aa12.55□□□□□ -0.4
RARA-208ENST00000577646 NFKBIAP25963 317 aa12.55□□□□□ -0.4
RARA-208ENST00000577646 NUDT1P36639 197 aa12.55□□□□□ -0.4
RARA-208ENST00000577646 TPMTP51580 245 aa12.55□□□□□ -0.4
RARA-208ENST00000577646 POLR2LP62875 67 aaKnown RBP12.55□□□□□ -0.4
RARA-208ENST00000577646 SLC10A7Q0GE19 358 aa12.55□□□□□ -0.4
RARA-208ENST00000577646 KLF1Q13351 362 aaPredicted RBP12.55□□□□□ -0.4
RARA-208ENST00000577646 PRKD1Q15139 912 aaPredicted RBP12.55□□□□□ -0.4
RARA-208ENST00000577646 NOMO1Q15155 1222 aa12.55□□□□□ -0.4
RARA-208ENST00000577646 SLC14A2Q15849 920 aa12.55□□□□□ -0.4
RARA-208ENST00000577646 NEK5Q6P3R8 708 aa12.55□□□□□ -0.4
RARA-208ENST00000577646 KIAA1324Q6UXG2 1013 aaKnown RBP12.55□□□□□ -0.4
RARA-208ENST00000577646 SRLQ86TD4 932 aa12.55□□□□□ -0.4
RARA-208ENST00000577646 MMAAQ8IVH4 418 aaKnown RBP12.55□□□□□ -0.4
RARA-208ENST00000577646 ZNF366Q8N895 744 aa12.55□□□□□ -0.4
RARA-208ENST00000577646 PIP4K2CQ8TBX8 421 aa12.55□□□□□ -0.4
RARA-208ENST00000577646 TRIM44Q96DX7 344 aaPredicted RBP12.55□□□□□ -0.4
RARA-208ENST00000577646 PPP1R2P1Q96PQ5 205 aa12.55□□□□□ -0.4
RARA-208ENST00000577646 NUDCD1Q96RS6 583 aa12.55□□□□□ -0.4
RARA-208ENST00000577646 IL12RB2Q99665 862 aa12.55□□□□□ -0.4
RARA-208ENST00000577646 OMDQ99983 421 aa12.55□□□□□ -0.4
RARA-208ENST00000577646 MGME1Q9BQP7 344 aa12.55□□□□□ -0.4
RARA-208ENST00000577646 HEMGNQ9BXL5 484 aa12.55□□□□□ -0.4
RARA-208ENST00000577646 POLR1EQ9GZS1 481 aaKnown RBP12.55□□□□□ -0.4
RARA-208ENST00000577646 ATP13A3Q9H7F0 1226 aa12.55□□□□□ -0.4
RARA-208ENST00000577646 TRHDEQ9UKU6 1024 aa12.55□□□□□ -0.4
RARA-208ENST00000577646 TTC7AQ9ULT0 858 aaPredicted RBP12.55□□□□□ -0.4
RARA-208ENST00000577646 PYCARDQ9ULZ3 195 aa12.55□□□□□ -0.4
RARA-208ENST00000577646 PACSIN2Q9UNF0 486 aaPredicted RBP12.55□□□□□ -0.4
RARA-208ENST00000577646 WASF2Q9Y6W5 498 aa12.55□□□□□ -0.4
RARA-208ENST00000577646 BCLAF3A2AJT9 711 aaKnown RBP12.54□□□□□ -0.4
RARA-208ENST00000577646 CFAP69A5D8W1 941 aa12.54□□□□□ -0.4
RARA-208ENST00000577646 KRIT1O00522 736 aa12.54□□□□□ -0.4
RARA-208ENST00000577646 MAP3K13O43283 966 aa12.54□□□□□ -0.4
RARA-208ENST00000577646 SOCS5O75159 536 aa12.54□□□□□ -0.4
RARA-208ENST00000577646 STK10O94804 968 aaKnown RBP12.54□□□□□ -0.4
RARA-208ENST00000577646 VAV1P15498 845 aa12.54□□□□□ -0.4
RARA-208ENST00000577646 CR2P20023 1033 aa12.54□□□□□ -0.4
RARA-208ENST00000577646 CA4P22748 312 aa12.54□□□□□ -0.4
RARA-208ENST00000577646 ITGB7P26010 798 aa12.54□□□□□ -0.4
RARA-208ENST00000577646 SERPINA4P29622 427 aa12.54□□□□□ -0.4
RARA-208ENST00000577646 CD6P30203 668 aa12.54□□□□□ -0.4
RARA-208ENST00000577646 STIP1P31948 543 aaKnown RBP12.54□□□□□ -0.4
RARA-208ENST00000577646 DYNLT1P63172 113 aa12.54□□□□□ -0.4
RARA-208ENST00000577646 AP1B1Q10567 949 aa12.54□□□□□ -0.4
RARA-208ENST00000577646 ELF2Q15723 593 aa12.54□□□□□ -0.4
RARA-208ENST00000577646 TEX44Q53QW1 395 aa12.54□□□□□ -0.4
RARA-208ENST00000577646 SLC45A4Q5BKX6 768 aa12.54□□□□□ -0.4
RARA-208ENST00000577646 ZNF805Q5CZA5 627 aa12.54□□□□□ -0.4
RARA-208ENST00000577646 ARSIQ5FYB1 569 aa12.54□□□□□ -0.4
RARA-208ENST00000577646 HEATR6Q6AI08 1181 aaKnown RBP12.54□□□□□ -0.4
RARA-208ENST00000577646 BRAT1Q6PJG6 821 aa12.54□□□□□ -0.4
RARA-208ENST00000577646 GDPD4Q6W3E5 623 aa12.54□□□□□ -0.4
RARA-208ENST00000577646 ARHGAP36Q6ZRI8 547 aa12.54□□□□□ -0.4
RARA-208ENST00000577646 SLC13A5Q86YT5 568 aaPredicted RBP12.54□□□□□ -0.4
RARA-208ENST00000577646 CDKL3Q8IVW4 592 aaPredicted RBP12.54□□□□□ -0.4
RARA-208ENST00000577646 TP53INP2Q8IXH6 220 aa12.54□□□□□ -0.4
RARA-208ENST00000577646 RYBPQ8N488 228 aaPredicted RBP12.54□□□□□ -0.4
RARA-208ENST00000577646 TSEN2Q8NCE0 465 aaKnown RBP12.54□□□□□ -0.4
RARA-208ENST00000577646 FOXJ1Q92949 421 aa12.54□□□□□ -0.4
RARA-208ENST00000577646 QKIQ96PU8 341 aaKnown RBP eCLIP12.54□□□□□ -0.4
RARA-208ENST00000577646 LGMNQ99538 433 aa12.54□□□□□ -0.4
RARA-208ENST00000577646 BTBD1Q9H0C5 482 aa12.54□□□□□ -0.4
RARA-208ENST00000577646 DUSP15Q9H1R2 295 aaPredicted RBP12.54□□□□□ -0.4
RARA-208ENST00000577646 EPC1Q9H2F5 836 aa12.54□□□□□ -0.4
RARA-208ENST00000577646 TNKS2Q9H2K2 1166 aa12.54□□□□□ -0.4
RARA-208ENST00000577646 MTG2Q9H4K7 406 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms