RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 A0A0U1RQS6 177 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 FAM47DPA6NHR8 397 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 KCNK1O00180 336 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 KRIT1O00522 736 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 APOL1O14791 398 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 ZNF185O15231 689 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 TIMM44O43615 452 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 LEFTY1O75610 366 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 RNASEH2AO75792 299 aaKnown RBP8.03□□□□□ -1.12
CCDC40-215ENST00000576033 ALDH1A2O94788 518 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 CTNNA2P26232 953 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 MAOBP27338 520 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 ABL2P42684 1182 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 SLC1A1P43005 524 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 HCAR3P49019 387 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 NDST2P52849 883 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 TAS2R38P59533 333 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 RHOAP61586 193 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 PPP2CBP62714 309 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 PPP2CAP67775 309 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 SULT2A1Q06520 285 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 GALNT2Q10471 571 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 CNTN1Q12860 1018 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 SIM2Q14190 667 aaPredicted RBP8.03□□□□□ -1.12
CCDC40-215ENST00000576033 TAZQ16635 292 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 PLK5Q496M5 336 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 ZNF776Q68DI1 518 aaPredicted RBP8.03□□□□□ -1.12
CCDC40-215ENST00000576033 SLC9A4Q6AI14 798 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 FBXO38Q6PIJ6 1188 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 CEP68Q76N32 757 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 PARS2Q7L3T8 475 aaKnown RBP8.03□□□□□ -1.12
CCDC40-215ENST00000576033 ADAT2Q7Z6V5 191 aaKnown RBP8.03□□□□□ -1.12
CCDC40-215ENST00000576033 SYCE1Q8N0S2 351 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 RASGEF1CQ8N431 466 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 RYBPQ8N488 228 aaPredicted RBP8.03□□□□□ -1.12
CCDC40-215ENST00000576033 MMGT1Q8N4V1 131 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 CAMKK1Q8N5S9 505 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 NOA1Q8NC60 698 aaKnown RBP8.03□□□□□ -1.12
CCDC40-215ENST00000576033 PIP4K2CQ8TBX8 421 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 PRCCQ92733 491 aaPredicted RBP8.03□□□□□ -1.12
CCDC40-215ENST00000576033 TOE1Q96GM8 510 aaKnown RBP8.03□□□□□ -1.12
CCDC40-215ENST00000576033 EPC1Q9H2F5 836 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 PABPC3Q9H361 631 aaKnown RBP8.03□□□□□ -1.12
CCDC40-215ENST00000576033 ANKZF1Q9H8Y5 726 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 PARD6AQ9NPB6 346 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 SMARCAL1Q9NZC9 954 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 UBA2Q9UBT2 640 aaPredicted RBP8.03□□□□□ -1.12
CCDC40-215ENST00000576033 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.03□□□□□ -1.12
CCDC40-215ENST00000576033 IL36AQ9UHA7 158 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 TTC7AQ9ULT0 858 aaPredicted RBP8.03□□□□□ -1.12
CCDC40-215ENST00000576033 R3HDM2Q9Y2K5 976 aaKnown RBP8.03□□□□□ -1.12
CCDC40-215ENST00000576033 PCDHGA2Q9Y5H1 932 aa8.03□□□□□ -1.12
CCDC40-215ENST00000576033 V9GYY5 206 aaPredicted RBP8.03□□□□□ -1.12
CCDC40-215ENST00000576033 EP300Q09472 2414 aaPredicted RBP8.03□□□□□ -1.12
CCDC40-215ENST00000576033 PCDH15Q96QU1 1955 aa8.02□□□□□ -1.12
CCDC40-215ENST00000576033 RALGAPA1Q6GYQ0 2036 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 TARSL2A2RTX5 802 aaKnown RBP8.02□□□□□ -1.13
CCDC40-215ENST00000576033 ARHGAP42A6NI28 874 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 PATE3B3GLJ2 98 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 KPNA3O00505 521 aaPredicted RBP8.02□□□□□ -1.13
CCDC40-215ENST00000576033 CST8O60676 142 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 HLA-DQB2P05538 268 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 UGT2B4P06133 528 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 ITPKAP23677 461 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 HOXA6P31267 233 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 CHRNA3P32297 505 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 CXCR5P32302 372 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 SLC8A1P32418 973 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 HTR7P34969 479 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 GARSP41250 739 aaKnown RBP8.02□□□□□ -1.13
CCDC40-215ENST00000576033 CLCN6P51797 869 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 NUBP1P53384 320 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 YBEYP58557 167 aaPredicted RBP8.02□□□□□ -1.13
CCDC40-215ENST00000576033 RPL6Q02878 288 aaKnown RBP8.02□□□□□ -1.13
CCDC40-215ENST00000576033 IL10RBQ08334 325 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 ELAVL3Q14576 367 aaKnown RBP8.02□□□□□ -1.13
CCDC40-215ENST00000576033 LBRQ14739 615 aaKnown RBP8.02□□□□□ -1.13
CCDC40-215ENST00000576033 PDK2Q15119 407 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 CARD16Q5EG05 197 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 TEX35Q5T0J7 233 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 ACBD5Q5T8D3 534 aaPredicted RBP8.02□□□□□ -1.13
CCDC40-215ENST00000576033 PIP5KL1Q5T9C9 394 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 LRRC38Q5VT99 294 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 AGBL4Q5VU57 503 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 MICALCLQ6ZW33 695 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 PEX26Q7Z412 305 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 MTERF4Q7Z6M4 381 aaKnown RBP8.02□□□□□ -1.13
CCDC40-215ENST00000576033 HDDC3Q8N4P3 179 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 OR2AP1Q8NGE2 309 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 GANCQ8TET4 914 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 OR8D1Q8WZ84 308 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 KLK6Q92876 244 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 PBKQ96KB5 322 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 OLFM3Q96PB7 478 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 MYOCQ99972 504 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 NCAPGQ9BPX3 1015 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 GPR174Q9BXC1 333 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 NEUROG2Q9H2A3 272 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 EBF2Q9HAK2 575 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 NT5MQ9NPB1 228 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms