RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 PARS2Q7L3T8 475 aaKnown RBP8.84□□□□□ -0.99
SMG6-210ENST00000572205 ZSWIM9Q86XI8 627 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 CNGA4Q8IV77 575 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 ZCCHC9Q8N567 271 aaKnown RBP8.84□□□□□ -0.99
SMG6-210ENST00000572205 PCDH20Q8N6Y1 951 aaKnown RBP8.84□□□□□ -0.99
SMG6-210ENST00000572205 CELF6Q96J87 481 aaKnown RBP8.84□□□□□ -0.99
SMG6-210ENST00000572205 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.84□□□□□ -0.99
SMG6-210ENST00000572205 SLC39A8Q9C0K1 460 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 CAAP1Q9H8G2 361 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 SGK2Q9HBY8 427 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 MRPL47Q9HD33 250 aaKnown RBP8.84□□□□□ -0.99
SMG6-210ENST00000572205 GPR27Q9NS67 375 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.84□□□□□ -0.99
SMG6-210ENST00000572205 FBXL12Q9NXK8 326 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 UVRAGQ9P2Y5 699 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 ZFR2Q9UPR6 939 aaKnown RBP8.84□□□□□ -0.99
SMG6-210ENST00000572205 ACACBO00763 2458 aa8.83□□□□□ -1
SMG6-210ENST00000572205 CFAP47Q6ZTR5 3102 aa8.83□□□□□ -1
SMG6-210ENST00000572205 A0A0U1RQJ8 604 aa8.83□□□□□ -1
SMG6-210ENST00000572205 MED19A0JLT2 244 aaPredicted RBP8.83□□□□□ -1
SMG6-210ENST00000572205 TSPAN11A1L157 253 aa8.83□□□□□ -1
SMG6-210ENST00000572205 PRR5-ARHGAP8B1AHC4 643 aa8.83□□□□□ -1
SMG6-210ENST00000572205 AKR1B15C9JRZ8 316 aaPredicted RBP8.83□□□□□ -1
SMG6-210ENST00000572205 INSIG1O15503 277 aa8.83□□□□□ -1
SMG6-210ENST00000572205 SLC7A4O43246 635 aa8.83□□□□□ -1
SMG6-210ENST00000572205 MFSD11O43934 449 aa8.83□□□□□ -1
SMG6-210ENST00000572205 LEFTY1O75610 366 aa8.83□□□□□ -1
SMG6-210ENST00000572205 IL1BP01584 269 aa8.83□□□□□ -1
SMG6-210ENST00000572205 DNTTP04053 509 aa8.83□□□□□ -1
SMG6-210ENST00000572205 TPM3P06753 285 aa8.83□□□□□ -1
SMG6-210ENST00000572205 CR2P20023 1033 aa8.83□□□□□ -1
SMG6-210ENST00000572205 CHRNA3P32297 505 aa8.83□□□□□ -1
SMG6-210ENST00000572205 ID4P47928 161 aa8.83□□□□□ -1
SMG6-210ENST00000572205 NDST2P52849 883 aa8.83□□□□□ -1
SMG6-210ENST00000572205 HADHBP55084 474 aaKnown RBP8.83□□□□□ -1
SMG6-210ENST00000572205 KRT83P78385 493 aa8.83□□□□□ -1
SMG6-210ENST00000572205 ARHGAP8P85298 464 aa8.83□□□□□ -1
SMG6-210ENST00000572205 MMRN1Q13201 1228 aa8.83□□□□□ -1
SMG6-210ENST00000572205 PIGHQ14442 188 aaPredicted RBP8.83□□□□□ -1
SMG6-210ENST00000572205 POLD3Q15054 466 aaPredicted RBP8.83□□□□□ -1
SMG6-210ENST00000572205 TAZQ16635 292 aa8.83□□□□□ -1
SMG6-210ENST00000572205 POM121L1PQ3SYA9 428 aa8.83□□□□□ -1
SMG6-210ENST00000572205 TTC31Q49AM3 519 aaPredicted RBP8.83□□□□□ -1
SMG6-210ENST00000572205 ATXN7L2Q5T6C5 722 aaPredicted RBP8.83□□□□□ -1
SMG6-210ENST00000572205 KIAA0895LQ68EN5 471 aa8.83□□□□□ -1
SMG6-210ENST00000572205 NCBP2-AS2Q69YL0 99 aa8.83□□□□□ -1
SMG6-210ENST00000572205 RAD9BQ6WBX8 426 aa8.83□□□□□ -1
SMG6-210ENST00000572205 PIP4P1Q86T03 277 aa8.83□□□□□ -1
SMG6-210ENST00000572205 TRIM69Q86WT6 500 aa8.83□□□□□ -1
SMG6-210ENST00000572205 PGBD5Q8N414 524 aa8.83□□□□□ -1
SMG6-210ENST00000572205 PQLC3Q8N755 202 aa8.83□□□□□ -1
SMG6-210ENST00000572205 ATP11CQ8NB49 1132 aa8.83□□□□□ -1
SMG6-210ENST00000572205 TMEM145Q8NBT3 493 aa8.83□□□□□ -1
SMG6-210ENST00000572205 TMIEQ8NEW7 156 aa8.83□□□□□ -1
SMG6-210ENST00000572205 OR2AP1Q8NGE2 309 aa8.83□□□□□ -1
SMG6-210ENST00000572205 OR2T34Q8NGX1 318 aa8.83□□□□□ -1
SMG6-210ENST00000572205 OR6K2Q8NGY2 324 aa8.83□□□□□ -1
SMG6-210ENST00000572205 PCDH19Q8TAB3 1148 aa8.83□□□□□ -1
SMG6-210ENST00000572205 BAHD1Q8TBE0 780 aaPredicted RBP8.83□□□□□ -1
SMG6-210ENST00000572205 GRIN3AQ8TCU5 1115 aa8.83□□□□□ -1
SMG6-210ENST00000572205 RFFLQ8WZ73 363 aa8.83□□□□□ -1
SMG6-210ENST00000572205 OR8D1Q8WZ84 308 aa8.83□□□□□ -1
SMG6-210ENST00000572205 SLC6A18Q96N87 628 aa8.83□□□□□ -1
SMG6-210ENST00000572205 HDAC8Q9BY41 377 aa8.83□□□□□ -1
SMG6-210ENST00000572205 TM6SF2Q9BZW4 377 aa8.83□□□□□ -1
SMG6-210ENST00000572205 BTBD1Q9H0C5 482 aa8.83□□□□□ -1
SMG6-210ENST00000572205 TM9SF3Q9HD45 589 aa8.83□□□□□ -1
SMG6-210ENST00000572205 KLHL11Q9NVR0 708 aa8.83□□□□□ -1
SMG6-210ENST00000572205 DNAAF2Q9NVR5 837 aaKnown RBP8.83□□□□□ -1
SMG6-210ENST00000572205 EIF2B4Q9UI10 523 aaKnown RBP8.83□□□□□ -1
SMG6-210ENST00000572205 GGT7Q9UJ14 662 aa8.83□□□□□ -1
SMG6-210ENST00000572205 WASF3Q9UPY6 502 aa8.83□□□□□ -1
SMG6-210ENST00000572205 A0A1W2PPC4 97 aa8.82□□□□□ -1
SMG6-210ENST00000572205 SOWAHDA6NJG2 315 aa8.82□□□□□ -1
SMG6-210ENST00000572205 AREL1O15033 823 aa8.82□□□□□ -1
SMG6-210ENST00000572205 PRPSAP2O60256 369 aa8.82□□□□□ -1
SMG6-210ENST00000572205 FOXD2O60548 495 aaPredicted RBP8.82□□□□□ -1
SMG6-210ENST00000572205 RNASEH2AO75792 299 aaKnown RBP8.82□□□□□ -1
SMG6-210ENST00000572205 RNF8O76064 485 aa8.82□□□□□ -1
SMG6-210ENST00000572205 H2AFZP0C0S5 128 aa8.82□□□□□ -1
SMG6-210ENST00000572205 ACADMP11310 421 aa8.82□□□□□ -1
SMG6-210ENST00000572205 CD59P13987 128 aa8.82□□□□□ -1
SMG6-210ENST00000572205 GM2AP17900 193 aa8.82□□□□□ -1
SMG6-210ENST00000572205 AMPD1P23109 780 aa8.82□□□□□ -1
SMG6-210ENST00000572205 ITGB7P26010 798 aa8.82□□□□□ -1
SMG6-210ENST00000572205 CD27P26842 260 aa8.82□□□□□ -1
SMG6-210ENST00000572205 ETFBP38117 255 aa8.82□□□□□ -1
SMG6-210ENST00000572205 PAPOLAP51003 745 aaKnown RBP8.82□□□□□ -1
SMG6-210ENST00000572205 CCR5P51681 352 aa8.82□□□□□ -1
SMG6-210ENST00000572205 SLC20A2Q08357 652 aa8.82□□□□□ -1
SMG6-210ENST00000572205 SHBQ15464 509 aa8.82□□□□□ -1
SMG6-210ENST00000572205 DUOXA1Q1HG43 343 aa8.82□□□□□ -1
SMG6-210ENST00000572205 ZNF284Q2VY69 593 aa8.82□□□□□ -1
SMG6-210ENST00000572205 INO80DQ53TQ3 878 aaPredicted RBP8.82□□□□□ -1
SMG6-210ENST00000572205 CARD16Q5EG05 197 aa8.82□□□□□ -1
SMG6-210ENST00000572205 PPP6R3Q5H9R7 873 aaPredicted RBP8.82□□□□□ -1
SMG6-210ENST00000572205 IL31Q6EBC2 164 aa8.82□□□□□ -1
SMG6-210ENST00000572205 RETSATQ6NUM9 610 aa8.82□□□□□ -1
SMG6-210ENST00000572205 KDM7AQ6ZMT4 941 aa8.82□□□□□ -1
SMG6-210ENST00000572205 H2AFVQ71UI9 128 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms