RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 ATXN2Q99700 1313 aaKnown RBP16.41■□□□□ 0.22
RAB40B-206ENST00000571995 AP2A1O95782 977 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 OAS1P00973 400 aaKnown RBP16.41■□□□□ 0.22
RAB40B-206ENST00000571995 CTPS1P17812 591 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 TPSB2P20231 275 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 TPSAB1Q15661 275 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 GRTP1Q5TC63 336 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 CLEC6AQ6EIG7 209 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 RAB44Q7Z6P3 723 aaPredicted RBP16.41■□□□□ 0.22
RAB40B-206ENST00000571995 HMCESQ96FZ2 354 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 TBATAQ96M53 351 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 ZNF570Q96NI8 536 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 NPAS2Q99743 824 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 CCSER2Q9H7U1 834 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 KANSL3Q9P2N6 904 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 FBXO5Q9UKT4 447 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 SUFUQ9UMX1 484 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 CDYLQ9Y232 598 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 ARHGEF37A1IGU5 675 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 DPYSL4O14531 572 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 CD151P48509 253 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 GEMP55040 296 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 TAS2R39P59534 338 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 RBBP7Q16576 425 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 PITRM1Q5JRX3 1037 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 LRRC73Q5JTD7 316 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 ATP13A1Q9HD20 1204 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 GNEQ9Y223 722 aaKnown RBP16.41■□□□□ 0.22
RAB40B-206ENST00000571995 MKI67P46013 3256 aaKnown RBP16.41■□□□□ 0.22
RAB40B-206ENST00000571995 ZNFX1Q9P2E3 1918 aaKnown RBP16.41■□□□□ 0.22
RAB40B-206ENST00000571995 FAM159BA6NKW6 160 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 MBL2P11226 248 aaPredicted RBP16.41■□□□□ 0.22
RAB40B-206ENST00000571995 PFKFB4Q16877 469 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 KYAT3Q6YP21 454 aaKnown RBP16.41■□□□□ 0.22
RAB40B-206ENST00000571995 FRA10AC1Q70Z53 315 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 RELL1Q8IUW5 271 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 CMTM5Q96DZ9 223 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 LENG8Q96PV6 779 aaPredicted RBP16.41■□□□□ 0.22
RAB40B-206ENST00000571995 SMIM14Q96QK8 99 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 CINPQ9BW66 212 aaPredicted RBP16.41■□□□□ 0.22
RAB40B-206ENST00000571995 GPR63Q9BZJ6 419 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 DERAQ9Y315 318 aa16.41■□□□□ 0.22
RAB40B-206ENST00000571995 FOCADQ5VW36 1801 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 E9PAM4 449 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 SNX2O60749 519 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 TPBGLP0DKB5 382 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 HADHAP40939 763 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 FLOT2Q14254 428 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 VARS2Q5ST30 1063 aaKnown RBP16.4■□□□□ 0.22
RAB40B-206ENST00000571995 RBM20Q5T481 1227 aaKnown RBP16.4■□□□□ 0.22
RAB40B-206ENST00000571995 ZNF598Q86UK7 904 aaKnown RBP16.4■□□□□ 0.22
RAB40B-206ENST00000571995 INPP5DQ92835 1189 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 RCN3Q96D15 328 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 RNF186Q9NXI6 227 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 GIMAP2Q9UG22 337 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 TLL2Q9Y6L7 1015 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 TYW5A2RUC4 315 aaKnown RBP16.4■□□□□ 0.22
RAB40B-206ENST00000571995 KLHL2O95198 593 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 LUC7L3O95232 432 aaKnown RBP16.4■□□□□ 0.22
RAB40B-206ENST00000571995 WARSP23381 471 aaKnown RBP16.4■□□□□ 0.22
RAB40B-206ENST00000571995 DNAL1Q4LDG9 190 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 C4orf22Q6V702 233 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 ZNF534Q76KX8 674 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 LRRC43Q8N309 656 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 DDI1Q8WTU0 396 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 TUBGCP3Q96CW5 907 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 ASIC4Q96FT7 647 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 GCNAQ96QF7 691 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 RGS18Q9NS28 235 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 CIDEBQ9UHD4 219 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 BTRCQ9Y297 605 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 AXIN1O15169 862 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 MTSS1O43312 755 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 TRIM16O95361 564 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 HLA-DQB2P05538 268 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 GJA1P17302 382 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 ACVRL1P37023 503 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 NFE2Q16621 373 aaPredicted RBP16.4■□□□□ 0.22
RAB40B-206ENST00000571995 IYDQ6PHW0 289 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 LINC00523Q86TU6 105 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 PIM3Q86V86 326 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 ATP6V0D2Q8N8Y2 350 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 TMEM169Q96HH4 297 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 IL22Q9GZX6 179 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 GLOD4Q9HC38 313 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 GIT1Q9Y2X7 761 aa16.4■□□□□ 0.22
RAB40B-206ENST00000571995 SEPT4O43236 478 aa16.39■□□□□ 0.21
RAB40B-206ENST00000571995 SRP72O76094 671 aaKnown RBP16.39■□□□□ 0.21
RAB40B-206ENST00000571995 RBBP5Q15291 538 aaKnown RBP16.39■□□□□ 0.21
RAB40B-206ENST00000571995 C6orf10Q5SRN2 563 aa16.39■□□□□ 0.21
RAB40B-206ENST00000571995 FSTL5Q8N475 847 aaPredicted RBP16.39■□□□□ 0.21
RAB40B-206ENST00000571995 MLPHQ9BV36 600 aaPredicted RBP16.39■□□□□ 0.21
RAB40B-206ENST00000571995 SEMA4BQ9NPR2 832 aaPredicted RBP16.39■□□□□ 0.21
RAB40B-206ENST00000571995 SAR1AQ9NR31 198 aa16.39■□□□□ 0.21
RAB40B-206ENST00000571995 MCM8Q9UJA3 840 aa16.39■□□□□ 0.21
RAB40B-206ENST00000571995 ARHGAP26Q9UNA1 814 aa16.39■□□□□ 0.21
RAB40B-206ENST00000571995 AHSGP02765 367 aa16.39■□□□□ 0.21
RAB40B-206ENST00000571995 RAG1P15918 1043 aa16.39■□□□□ 0.21
RAB40B-206ENST00000571995 TPD52P55327 224 aaPredicted RBP16.39■□□□□ 0.21
RAB40B-206ENST00000571995 SLC18A2Q05940 514 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms