RNA–Protein interactions for RNA: ENST00000570845.5

ATP2A3-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, human

TSL 1 (best)

Gene ATP2A3, Length 604 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2A3-208	ENST00000570845	FAM46C	Q5VWP2	391 aa		11.74	□□□□□ -0.53
ATP2A3-208	ENST00000570845	PRR23B	Q6ZRT6	265 aa		11.74	□□□□□ -0.53
ATP2A3-208	ENST00000570845	BZW1	Q7L1Q6	419 aa	Known RBP	11.74	□□□□□ -0.53
ATP2A3-208	ENST00000570845	PLPP6	Q8IY26	295 aa		11.74	□□□□□ -0.53
ATP2A3-208	ENST00000570845	CCDC13	Q8IYE1	715 aa		11.74	□□□□□ -0.53
ATP2A3-208	ENST00000570845	BBS5	Q8N3I7	341 aa		11.74	□□□□□ -0.53
ATP2A3-208	ENST00000570845	FRMD1	Q8N878	549 aa		11.74	□□□□□ -0.53
ATP2A3-208	ENST00000570845	TSEN2	Q8NCE0	465 aa	Known RBP	11.74	□□□□□ -0.53
ATP2A3-208	ENST00000570845	TMIE	Q8NEW7	156 aa		11.74	□□□□□ -0.53
ATP2A3-208	ENST00000570845	OLFM3	Q96PB7	478 aa		11.74	□□□□□ -0.53
ATP2A3-208	ENST00000570845	TSGA13	Q96PP4	275 aa		11.74	□□□□□ -0.53
ATP2A3-208	ENST00000570845	LGMN	Q99538	433 aa		11.74	□□□□□ -0.53
ATP2A3-208	ENST00000570845	OMD	Q99983	421 aa		11.74	□□□□□ -0.53
ATP2A3-208	ENST00000570845	HERPUD2	Q9BSE4	406 aa		11.74	□□□□□ -0.53
ATP2A3-208	ENST00000570845	SEPT3	Q9UH03	358 aa		11.74	□□□□□ -0.53
ATP2A3-208	ENST00000570845	EVL	Q9UI08	416 aa	Predicted RBP	11.74	□□□□□ -0.53
ATP2A3-208	ENST00000570845	MBD1	Q9UIS9	605 aa	Predicted RBP	11.74	□□□□□ -0.53
ATP2A3-208	ENST00000570845	SARDH	Q9UL12	918 aa		11.74	□□□□□ -0.53
ATP2A3-208	ENST00000570845	PPM1H	Q9ULR3	514 aa		11.74	□□□□□ -0.53
ATP2A3-208	ENST00000570845	NCKAP1	Q9Y2A7	1128 aa		11.74	□□□□□ -0.53
ATP2A3-208	ENST00000570845	EFR3B	Q9Y2G0	817 aa		11.74	□□□□□ -0.53
ATP2A3-208	ENST00000570845	WASF2	Q9Y6W5	498 aa		11.74	□□□□□ -0.53
ATP2A3-208	ENST00000570845	OTOGL	Q3ZCN5	2332 aa		11.74	□□□□□ -0.53
ATP2A3-208	ENST00000570845		A0A1W2PP55	124 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	GOLGA6L9	A6NEM1	432 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	APOC4-APOC2	K7ER74	178 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	RNF103	O00237	685 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	PLK4	O00444	970 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	KCNK3	O14649	394 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	MATN3	O15232	486 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	LRP4	O75096	1905 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	NDUFS2	O75306	463 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	RNASEH2A	O75792	299 aa	Known RBP	11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	NEBL	O76041	1014 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	TJP3	O95049	919 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	POP4	O95707	220 aa	Known RBP	11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	IGLV3-19	P01714	112 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	APOC2	P02655	101 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	BCKDHB	P21953	392 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	CD6	P30203	668 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	OXTR	P30559	389 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	GK	P32189	559 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	NBL1	P41271	181 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	RGR	P47804	291 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	RENBP	P51606	427 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	NHLH1	Q02575	133 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	RAD51	Q06609	339 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	SFSWAP	Q12872	951 aa	Known RBP	11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	SIM2	Q14190	667 aa	Predicted RBP	11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	MARC1	Q5VT66	337 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	SLC36A4	Q6YBV0	504 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	USP30	Q70CQ3	517 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	B4GALNT4	Q76KP1	1039 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	SRL	Q86TD4	932 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	KBTBD6	Q86V97	674 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	ZC3H18	Q86VM9	953 aa	Known RBP	11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	HDDC3	Q8N4P3	179 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	AADAT	Q8N5Z0	425 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	MAML1	Q92585	1016 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	FATE1	Q969F0	183 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	PSKH2	Q96QS6	385 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	TLR10	Q9BXR5	811 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	EPC1	Q9H2F5	836 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	NT5M	Q9NPB1	228 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	DYRK4	Q9NR20	520 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	FBXL12	Q9NXK8	326 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	SERGEF	Q9UGK8	458 aa		11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.73	□□□□□ -0.53
ATP2A3-208	ENST00000570845	FAM186A	A6NE01	2351 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	KNL1	Q8NG31	2342 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	DMD	P11532	3685 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	KCNK1	O00180	336 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	ENC1	O14682	589 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	MUSK	O15146	869 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	INSIG1	O15503	277 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	KIF5C	O60282	957 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	UGT2B4	P06133	528 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	CCNB1	P14635	433 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	MSN	P26038	577 aa	Known RBP	11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	DRD3	P35462	400 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	HSPA9	P38646	679 aa	Known RBP	11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	CSNK1D	P48730	415 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	OTUD4	Q01804	1114 aa	Known RBP	11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	ZNF33A	Q06730	810 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	CNTN1	Q12860	1018 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	HNRNPD	Q14103	355 aa	Known RBP	11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	NOMO1	Q15155	1222 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	LPAL2	Q16609	132 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	C11orf74	Q86VG3	221 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	SLC35F6	Q8N357	371 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	PGBD5	Q8N414	524 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	TEX26	Q8N6G2	289 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	TFB1M	Q8WVM0	346 aa	Known RBP	11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	ARRDC3	Q96B67	414 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	TOE1	Q96GM8	510 aa	Known RBP	11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	PPP1R16A	Q96I34	528 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	LRIG1	Q96JA1	1093 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	PHOX2B	Q99453	314 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	OSBPL1A	Q9BXW6	950 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	BRD8	Q9H0E9	1235 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms