RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 RASA2Q15283 850 aa11.08□□□□□ -0.63
PDXDC1-216ENST00000569715 DUSP6Q16828 381 aa11.08□□□□□ -0.63
PDXDC1-216ENST00000569715 ARHGAP15Q53QZ3 475 aa11.08□□□□□ -0.63
PDXDC1-216ENST00000569715 LRRC6Q86X45 466 aa11.08□□□□□ -0.63
PDXDC1-216ENST00000569715 APCDD1Q8J025 514 aa11.08□□□□□ -0.63
PDXDC1-216ENST00000569715 CPXM2Q8N436 756 aa11.08□□□□□ -0.63
PDXDC1-216ENST00000569715 SMG7Q92540 1137 aaKnown RBP11.08□□□□□ -0.63
PDXDC1-216ENST00000569715 TADA1Q96BN2 335 aa11.08□□□□□ -0.63
PDXDC1-216ENST00000569715 ALG14Q96F25 216 aa11.08□□□□□ -0.63
PDXDC1-216ENST00000569715 ZNF599Q96NL3 588 aa11.08□□□□□ -0.63
PDXDC1-216ENST00000569715 POLR1EQ9GZS1 481 aaKnown RBP11.08□□□□□ -0.63
PDXDC1-216ENST00000569715 TDP1Q9NUW8 608 aa11.08□□□□□ -0.63
PDXDC1-216ENST00000569715 VPS28Q9UK41 221 aa11.08□□□□□ -0.63
PDXDC1-216ENST00000569715 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 ZCWPW2A0A1B0GU75 182 aa11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 TMEM120BA0PK00 339 aa11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 FGF19O95750 216 aa11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 INHBAP08476 426 aa11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 BRAFP15056 766 aa11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 PFKLP17858 780 aa11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 DDX6P26196 483 aaKnown RBP eCLIP11.08□□□□□ -0.643e-7■■■■■ 34.3
PDXDC1-216ENST00000569715 ATP5DP30049 168 aa11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 CYTH1Q15438 398 aa11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 TMEM135Q86UB9 458 aa11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 ARFGAP2Q8N6H7 521 aa11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 KLF6Q99612 283 aaPredicted RBP11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 APOL5Q9BWW9 433 aa11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 IL22Q9GZX6 179 aa11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 RABEP2Q9H5N1 569 aa11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 PPCSQ9HAB8 311 aa11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 MLXIPLQ9NP71 852 aa11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 PSAT1Q9Y617 370 aa11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 SPAG7O75391 227 aa11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 POLBP06746 335 aa11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 NPY2RP49146 381 aa11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 TAOK1Q7L7X3 1001 aa11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 MGME1Q9BQP7 344 aa11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 CINPQ9BW66 212 aaPredicted RBP11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 TRABDQ9H4I3 376 aa11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 PIDD1Q9HB75 910 aa11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 VPS51Q9UID3 782 aa11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 SOX13Q9UN79 622 aa11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 ZNF510Q9Y2H8 683 aa11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 MRPS23Q9Y3D9 190 aaKnown RBP11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 NUP210Q8TEM1 1887 aaPredicted RBP11.08□□□□□ -0.64
PDXDC1-216ENST00000569715 CD70P32970 193 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 BMPR2Q13873 1038 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 ZNF77Q15935 545 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 ANKRD20A4Q4UJ75 823 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 FYB2Q5VWT5 728 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 SLC26A11Q86WA9 606 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 ST13P5Q8NFI4 369 aaPredicted RBP11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 PSKH2Q96QS6 385 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 NAT9Q9BTE0 207 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 LINC00597Q9H2U6 94 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 NOD2Q9HC29 1040 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 PSD3Q9NYI0 1048 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 SEPT3Q9UH03 358 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 MSRAQ9UJ68 235 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 E2F8A0AVK6 867 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 GOLGA8RI6L899 631 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 MT-CO1P00395 513 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 LMAN2Q12907 356 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 KCNC3Q14003 757 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 MPPE1Q53F39 396 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 SPANXN3Q5MJ09 141 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 ALG1LQ6GMV1 187 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 TMEM25Q86YD3 366 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 CCNJLQ8IV13 435 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 ARID3BQ8IVW6 561 aaPredicted RBP11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 MGARPQ8TDB4 240 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 CERS2Q96G23 380 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 IGFLR1Q9H665 355 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 SLC28A3Q9HAS3 691 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 KCNK9Q9NPC2 374 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 VPS45Q9NRW7 570 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 IKBKGQ9Y6K9 419 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 FAM237BA0A1B0GVD1 139 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 GOLGA8TH3BQL2 631 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 K7ERQ8 282 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 USP1O94782 785 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 TMCC1O94876 653 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 PRKCGP05129 697 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 ATXN1LP0C7T5 689 aaKnown RBP11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 LRRC14Q15048 493 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 RASSF3Q86WH2 238 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 ANKRD42Q8N9B4 389 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 LEMD2Q8NC56 503 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 LRRC3BQ96PB8 259 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 PPP1R2P1Q96PQ5 205 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 SLC2A6Q9UGQ3 507 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 FCF1Q9Y324 198 aaKnown RBP11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 WNT6Q9Y6F9 365 aa11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 SPTBN5Q9NRC6 3674 aaKnown RBP11.07□□□□□ -0.64
PDXDC1-216ENST00000569715 HMX2A2RU54 273 aa11.06□□□□□ -0.64
PDXDC1-216ENST00000569715 SCNN1BP51168 640 aa11.06□□□□□ -0.64
PDXDC1-216ENST00000569715 USP4Q13107 963 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms