RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 CEP41Q9BYV8 373 aa18.25■□□□□ 0.51
COMMD4-222ENST00000568034 NT5MQ9NPB1 228 aa18.25■□□□□ 0.51
COMMD4-222ENST00000568034 RBM22Q9NW64 420 aaKnown RBP eCLIP18.25■□□□□ 0.51
COMMD4-222ENST00000568034 EVLQ9UI08 416 aaPredicted RBP18.25■□□□□ 0.51
COMMD4-222ENST00000568034 DNPEPQ9ULA0 475 aa18.25■□□□□ 0.51
COMMD4-222ENST00000568034 ATP8A1Q9Y2Q0 1164 aa18.25■□□□□ 0.51
COMMD4-222ENST00000568034 CACNA1HO95180 2353 aa18.25■□□□□ 0.51
COMMD4-222ENST00000568034 CCDC163A0A0D9SF12 145 aa18.24■□□□□ 0.51
COMMD4-222ENST00000568034 TTC24A2A3L6 582 aaPredicted RBP18.24■□□□□ 0.51
COMMD4-222ENST00000568034 BCLAF3A2AJT9 711 aaKnown RBP18.24■□□□□ 0.51
COMMD4-222ENST00000568034 H7C0C1 242 aa18.24■□□□□ 0.51
COMMD4-222ENST00000568034 LIASO43766 372 aa18.24■□□□□ 0.51
COMMD4-222ENST00000568034 SP9P0CG40 484 aa18.24■□□□□ 0.51
COMMD4-222ENST00000568034 RECQLP46063 649 aaPredicted RBP18.24■□□□□ 0.51
COMMD4-222ENST00000568034 ATP5OP48047 213 aa18.24■□□□□ 0.51
COMMD4-222ENST00000568034 PSMD8P48556 350 aa18.24■□□□□ 0.51
COMMD4-222ENST00000568034 FNTBP49356 437 aa18.24■□□□□ 0.51
COMMD4-222ENST00000568034 NRLP54845 237 aa18.24■□□□□ 0.51
COMMD4-222ENST00000568034 NSUN2Q08J23 767 aaKnown RBP eCLIP18.24■□□□□ 0.51
COMMD4-222ENST00000568034 IHHQ14623 411 aa18.24■□□□□ 0.51
COMMD4-222ENST00000568034 OASLQ15646 514 aaKnown RBP18.24■□□□□ 0.51
COMMD4-222ENST00000568034 LONRF2Q1L5Z9 754 aa18.24■□□□□ 0.51
COMMD4-222ENST00000568034 CDKL3Q8IVW4 592 aaPredicted RBP18.24■□□□□ 0.51
COMMD4-222ENST00000568034 PRELID2Q8N945 189 aa18.24■□□□□ 0.51
COMMD4-222ENST00000568034 PRSS33Q8NF86 280 aa18.24■□□□□ 0.51
COMMD4-222ENST00000568034 PIP4K2CQ8TBX8 421 aa18.24■□□□□ 0.51
COMMD4-222ENST00000568034 GRIN3AQ8TCU5 1115 aa18.24■□□□□ 0.51
COMMD4-222ENST00000568034 ACTRT1Q8TDG2 376 aa18.24■□□□□ 0.51
COMMD4-222ENST00000568034 HTR3CQ8WXA8 447 aa18.24■□□□□ 0.51
COMMD4-222ENST00000568034 SIPA1Q96FS4 1042 aa18.24■□□□□ 0.51
COMMD4-222ENST00000568034 HEPHQ9BQS7 1158 aa18.24■□□□□ 0.51
COMMD4-222ENST00000568034 TPSD1Q9BZJ3 242 aa18.24■□□□□ 0.51
COMMD4-222ENST00000568034 USP29Q9HBJ7 922 aa18.24■□□□□ 0.51
COMMD4-222ENST00000568034 USP36Q9P275 1121 aaKnown RBP18.24■□□□□ 0.51
COMMD4-222ENST00000568034 IL36AQ9UHA7 158 aa18.24■□□□□ 0.51
COMMD4-222ENST00000568034 AMACRQ9UHK6 382 aa18.24■□□□□ 0.51
COMMD4-222ENST00000568034 PGRMC1O00264 195 aaKnown RBP18.23■□□□□ 0.51
COMMD4-222ENST00000568034 AXIN1O15169 862 aa18.23■□□□□ 0.51
COMMD4-222ENST00000568034 MID1O15344 667 aa18.23■□□□□ 0.51
COMMD4-222ENST00000568034 LEFTY1O75610 366 aa18.23■□□□□ 0.51
COMMD4-222ENST00000568034 POP4O95707 220 aaKnown RBP18.23■□□□□ 0.51
COMMD4-222ENST00000568034 ZBTB16Q05516 673 aa18.23■□□□□ 0.51
COMMD4-222ENST00000568034 ZNF528Q3MIS6 628 aa18.23■□□□□ 0.51
COMMD4-222ENST00000568034 TEX44Q53QW1 395 aa18.23■□□□□ 0.51
COMMD4-222ENST00000568034 ARSIQ5FYB1 569 aa18.23■□□□□ 0.51
COMMD4-222ENST00000568034 HEATR6Q6AI08 1181 aaKnown RBP18.23■□□□□ 0.51
COMMD4-222ENST00000568034 NCEH1Q6PIU2 408 aa18.23■□□□□ 0.51
COMMD4-222ENST00000568034 KIAA1324Q6UXG2 1013 aaKnown RBP18.23■□□□□ 0.51
COMMD4-222ENST00000568034 SRLQ86TD4 932 aa18.23■□□□□ 0.51
COMMD4-222ENST00000568034 WDR5BQ86VZ2 330 aa18.23■□□□□ 0.51
COMMD4-222ENST00000568034 ZSCAN30Q86W11 494 aa18.23■□□□□ 0.51
COMMD4-222ENST00000568034 CREG2Q8IUH2 290 aa18.23■□□□□ 0.51
COMMD4-222ENST00000568034 BBS5Q8N3I7 341 aa18.23■□□□□ 0.51
COMMD4-222ENST00000568034 AADATQ8N5Z0 425 aa18.23■□□□□ 0.51
COMMD4-222ENST00000568034 TMIEQ8NEW7 156 aa18.23■□□□□ 0.51
COMMD4-222ENST00000568034 ARRDC2Q8TBH0 407 aa18.23■□□□□ 0.51
COMMD4-222ENST00000568034 PRCCQ92733 491 aaPredicted RBP18.23■□□□□ 0.51
COMMD4-222ENST00000568034 NKD2Q969F2 451 aaPredicted RBP18.23■□□□□ 0.51
COMMD4-222ENST00000568034 FAM131CQ96AQ9 280 aa18.23■□□□□ 0.51
COMMD4-222ENST00000568034 ARRDC3Q96B67 414 aa18.23■□□□□ 0.51
COMMD4-222ENST00000568034 NUDCD1Q96RS6 583 aa18.23■□□□□ 0.51
COMMD4-222ENST00000568034 FRMD8P1Q9BZ68 369 aaPredicted RBP18.23■□□□□ 0.51
COMMD4-222ENST00000568034 PABPC3Q9H361 631 aaKnown RBP18.23■□□□□ 0.51
COMMD4-222ENST00000568034 ZDHHC6Q9H6R6 413 aa18.23■□□□□ 0.51
COMMD4-222ENST00000568034 SEPT10Q9P0V9 454 aa18.23■□□□□ 0.51
COMMD4-222ENST00000568034 BCCIPQ9P287 314 aaKnown RBP eCLIP18.23■□□□□ 0.51
COMMD4-222ENST00000568034 SERGEFQ9UGK8 458 aa18.23■□□□□ 0.51
COMMD4-222ENST00000568034 SAR1BQ9Y6B6 198 aa18.23■□□□□ 0.51
COMMD4-222ENST00000568034 MTSS1O43312 755 aa18.22■□□□□ 0.51
COMMD4-222ENST00000568034 PIGNO95427 931 aa18.22■□□□□ 0.51
COMMD4-222ENST00000568034 ADH1BP00325 375 aa18.22■□□□□ 0.51
COMMD4-222ENST00000568034 IL1BP01584 269 aa18.22■□□□□ 0.51
COMMD4-222ENST00000568034 IGLV3-19P01714 112 aa18.22■□□□□ 0.51
COMMD4-222ENST00000568034 PRNPP04156 253 aa18.22■□□□□ 0.51
COMMD4-222ENST00000568034 CASQ1P31415 396 aa18.22■□□□□ 0.51
COMMD4-222ENST00000568034 CD68P34810 354 aaPredicted RBP18.22■□□□□ 0.51
COMMD4-222ENST00000568034 DRD3P35462 400 aa18.22■□□□□ 0.51
COMMD4-222ENST00000568034 SCNN1BP51168 640 aa18.22■□□□□ 0.51
COMMD4-222ENST00000568034 GDF10P55107 478 aa18.22■□□□□ 0.51
COMMD4-222ENST00000568034 DSC2Q02487 901 aa18.22■□□□□ 0.51
COMMD4-222ENST00000568034 NIPAL4Q0D2K0 466 aa18.22■□□□□ 0.51
COMMD4-222ENST00000568034 TCF15Q12870 199 aa18.22■□□□□ 0.51
COMMD4-222ENST00000568034 CCNG2Q16589 344 aa18.22■□□□□ 0.51
COMMD4-222ENST00000568034 DRICH1Q6PGQ1 229 aaPredicted RBP18.22■□□□□ 0.51
COMMD4-222ENST00000568034 DARS2Q6PI48 645 aaKnown RBP18.22■□□□□ 0.51
COMMD4-222ENST00000568034 DSG4Q86SJ6 1040 aa18.22■□□□□ 0.51
COMMD4-222ENST00000568034 ZNF567Q8N184 647 aa18.22■□□□□ 0.51
COMMD4-222ENST00000568034 RYBPQ8N488 228 aaPredicted RBP18.22■□□□□ 0.51
COMMD4-222ENST00000568034 MAIP1Q8WWC4 291 aa18.22■□□□□ 0.51
COMMD4-222ENST00000568034 TEKT5Q96M29 485 aa18.22■□□□□ 0.51
COMMD4-222ENST00000568034 CPEB1Q9BZB8 566 aaKnown RBP18.22■□□□□ 0.51
COMMD4-222ENST00000568034 NOD2Q9HC29 1040 aa18.22■□□□□ 0.51
COMMD4-222ENST00000568034 FARP1Q9Y4F1 1045 aaPredicted RBP18.22■□□□□ 0.51
COMMD4-222ENST00000568034 PLXND1Q9Y4D7 1925 aa18.21■□□□□ 0.51
COMMD4-222ENST00000568034 C1QTNF3-AMACRE9PGA6 284 aa18.21■□□□□ 0.51
COMMD4-222ENST00000568034 PLK4O00444 970 aa18.21■□□□□ 0.51
COMMD4-222ENST00000568034 KRIT1O00522 736 aa18.21■□□□□ 0.51
COMMD4-222ENST00000568034 KCNN4O15554 427 aa18.21■□□□□ 0.51
COMMD4-222ENST00000568034 RNASEH1O60930 286 aaKnown RBP18.21■□□□□ 0.51
COMMD4-222ENST00000568034 MMP2P08253 660 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms