RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ATP6V0A2Q9Y487 856 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 PCDHA5Q9Y5H7 936 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 IKBKGQ9Y6K9 419 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 SMIM30A4D0T7 59 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 RGSL1A5PLK6 1076 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 DRGXA6NNA5 263 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 DNM1LO00429 736 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 PLOD2O00469 737 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 GPR42O15529 346 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 CCNT1O60563 726 aaKnown RBP3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 AVILO75366 819 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 BCAS2O75934 225 aaPredicted RBP3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 RECQL5O94762 991 aaPredicted RBP3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 NKX2-2O95096 273 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 BCL10O95999 233 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 PNPP00491 289 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 ERBB2P04626 1255 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 CHRM4P08173 479 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 PDHA1P08559 390 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 KRT13P13646 458 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 LAG3P18627 525 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 EDN2P20800 178 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 FBLN1P23142 703 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 SP100P23497 879 aaPredicted RBP3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 PRPH2P23942 346 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 GSTM2P28161 218 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 IGHMBP2P38935 993 aaKnown RBP3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 SKIV2L2P42285 1042 aaKnown RBP3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 LIMS1P48059 325 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 GNAQP50148 359 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 RPS6KA3P51812 740 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 DGKQP52824 942 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 FOXL2P58012 376 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 TIRAPP58753 221 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 B4GALNT1Q00973 533 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 TAP1Q03518 808 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 TLE3Q04726 772 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 RRP1BQ14684 758 aaKnown RBP3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 USP10Q14694 798 aaKnown RBP3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 VEPH1Q14D04 833 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 MORF4L2Q15014 288 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 SLC18A3Q16572 532 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 HYAL4Q2M3T9 481 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 TYSND1Q2T9J0 566 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 COL28A1Q2UY09 1125 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 ANKDD1AQ495B1 522 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 CD300EQ496F6 205 aaPredicted RBP3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 ZMAT1Q5H9K5 638 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 MOB3CQ70IA8 216 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 PLEKHH3Q7Z736 793 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 B3GNT8Q7Z7M8 397 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 ADGRE4PQ86SQ3 457 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 GPAT4Q86UL3 456 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 FAM160B2Q86V87 743 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 IQCHQ86VS3 1027 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 TDRPQ86YL5 185 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 IZUMO1Q8IYV9 350 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 TTC9BQ8N6N2 239 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 TTLL6Q8N841 843 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 PI4KAP1Q8N8J0 262 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 CAMKVQ8NCB2 501 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 ZBTB44Q8NCP5 570 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 POC1BQ8TC44 478 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 NSMCE1Q8WV22 266 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 PSPC1Q8WXF1 523 aaKnown RBP3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 ATG4AQ8WYN0 398 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 OVCA2Q8WZ82 227 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 TMEM125Q96AQ2 219 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 LOXL4Q96JB6 756 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 VPS50Q96JG6 964 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 LINC00615Q96LM1 132 aaPredicted RBP3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 FIZ1Q96SL8 496 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 INTS14Q96SY0 518 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 TCF25Q9BQ70 676 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 ZSWIM1Q9BR11 485 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 REXO4Q9GZR2 422 aaKnown RBP3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 GOLPH3LQ9H4A5 285 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 SLC6A13Q9NSD5 602 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 SETD4Q9NVD3 440 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 MTMR4Q9NYA4 1195 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 DLGAP2Q9P1A6 1054 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 ACTR3BQ9P1U1 418 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 CGNQ9P2M7 1197 aaKnown RBP3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 HSFX1Q9UBD0 423 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 HDAC6Q9UBN7 1215 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 NKX1-2Q9UD57 310 aaPredicted RBP3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 SSX2IPQ9Y2D8 614 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 ZDHHC9Q9Y397 364 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 SH3BP1Q9Y3L3 701 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 NR2E1Q9Y466 385 aa3.45□□□□□ -1.86
HERPUD1-211ENST00000566550 GRXCR1A8MXD5 290 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 PSMD9O00233 223 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 ZNF185O15231 689 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 SPRY1O43609 319 aaPredicted RBP3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 SMPD2O60906 423 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 SUN1O94901 812 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 KAT7O95251 611 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 GCNT3O95395 438 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 OLFM2O95897 454 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 IFNB1P01574 187 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 367.6 ms