RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 GOLGA8QA0A0J9YX86 632 aa18.94■□□□□ 0.62
MSLN-207ENST00000566549 GOLGA8OA6NCC3 632 aa18.94■□□□□ 0.62
MSLN-207ENST00000566549 GOLGA8NF8WBI6 632 aa18.94■□□□□ 0.62
MSLN-207ENST00000566549 TMEM189-UBE2V1I3L0A0 370 aa18.94■□□□□ 0.62
MSLN-207ENST00000566549 CDC25CP30307 473 aa18.94■□□□□ 0.62
MSLN-207ENST00000566549 FAM189BP81408 668 aa18.94■□□□□ 0.62
MSLN-207ENST00000566549 CCDC6Q16204 474 aa18.94■□□□□ 0.62
MSLN-207ENST00000566549 RASIP1Q5U651 963 aa18.94■□□□□ 0.62
MSLN-207ENST00000566549 FBXL22Q6P050 247 aa18.94■□□□□ 0.62
MSLN-207ENST00000566549 RSPO2Q6UXX9 243 aaPredicted RBP18.94■□□□□ 0.62
MSLN-207ENST00000566549 FSTL5Q8N475 847 aaPredicted RBP18.94■□□□□ 0.62
MSLN-207ENST00000566549 RAET1EQ8TD07 263 aa18.94■□□□□ 0.62
MSLN-207ENST00000566549 SREK1Q8WXA9 508 aaKnown RBP18.94■□□□□ 0.62
MSLN-207ENST00000566549 SGF29Q96ES7 293 aa18.94■□□□□ 0.62
MSLN-207ENST00000566549 C1orf74Q96LT6 269 aa18.94■□□□□ 0.62
MSLN-207ENST00000566549 NDNQ99608 321 aa18.94■□□□□ 0.62
MSLN-207ENST00000566549 OMDQ99983 421 aa18.94■□□□□ 0.62
MSLN-207ENST00000566549 CDH19Q9H159 772 aa18.94■□□□□ 0.62
MSLN-207ENST00000566549 MYO16Q9Y6X6 1858 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 LOC100653049A0A140TA62 436 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 SLC12A8A0AV02 714 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 KRT34O76011 436 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 AOC1P19801 751 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 GRIA4P48058 902 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 SLC12A1Q13621 1099 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 MARC1Q5VT66 337 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 ZNF683Q8IZ20 524 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 ARHGAP24Q8N264 748 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 PHTF2Q8N3S3 785 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 TMEM151AQ8N4L1 468 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 NXNL1Q96CM4 212 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 MYEOVQ96EZ4 313 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 PRDM5Q9NQX1 630 aaPredicted RBP18.93■□□□□ 0.62
MSLN-207ENST00000566549 MARCH2Q9P0N8 246 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 XPR1Q9UBH6 696 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 RPL26L1Q9UNX3 145 aaKnown RBP18.93■□□□□ 0.62
MSLN-207ENST00000566549 PLA2G4CQ9UP65 541 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 CDY1Q9Y6F8 540 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 NYNRINQ9P2P1 1898 aaKnown RBP18.93■□□□□ 0.62
MSLN-207ENST00000566549 NEMP1O14524 444 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 DCXO43602 365 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 ZMPSTE24O75844 475 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 SLC2A3P11169 496 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 NAGLUP54802 743 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 IHHQ14623 411 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 TBCCQ15814 346 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 ZNF789Q5FWF6 425 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 MAP3K21Q5TCX8 1036 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 MSANTD2Q6P1R3 559 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 SCUBE1Q8IWY4 988 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 ULK2Q8IYT8 1036 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 UMODL1-AS1Q8N2C9 162 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 GIPC2Q8TF65 315 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 STMN2Q93045 179 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 RPRD1AQ96P16 312 aaPredicted RBP18.93■□□□□ 0.62
MSLN-207ENST00000566549 MMADHCQ9H3L0 296 aaPredicted RBP18.93■□□□□ 0.62
MSLN-207ENST00000566549 STN1Q9H668 368 aaKnown RBP18.93■□□□□ 0.62
MSLN-207ENST00000566549 TREX1Q9NSU2 369 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 ACOT9Q9Y305 439 aa18.93■□□□□ 0.62
MSLN-207ENST00000566549 PATJQ8NI35 1801 aa18.92■□□□□ 0.62
MSLN-207ENST00000566549 STMN1P16949 149 aa18.92■□□□□ 0.62
MSLN-207ENST00000566549 RHOQP17081 205 aa18.92■□□□□ 0.62
MSLN-207ENST00000566549 RENBPP51606 427 aa18.92■□□□□ 0.62
MSLN-207ENST00000566549 RAB10P61026 200 aa18.92■□□□□ 0.62
MSLN-207ENST00000566549 DLG1Q12959 904 aa18.92■□□□□ 0.62
MSLN-207ENST00000566549 TAF11Q15544 211 aa18.92■□□□□ 0.62
MSLN-207ENST00000566549 UGP2Q16851 508 aa18.92■□□□□ 0.62
MSLN-207ENST00000566549 KDELC1Q6UW63 502 aa18.92■□□□□ 0.62
MSLN-207ENST00000566549 RNF19BQ6ZMZ0 732 aa18.92■□□□□ 0.62
MSLN-207ENST00000566549 CNTN4Q8IWV2 1026 aa18.92■□□□□ 0.62
MSLN-207ENST00000566549 DBF4BQ8NFT6 615 aa18.92■□□□□ 0.62
MSLN-207ENST00000566549 SLC25A51Q9H1U9 297 aa18.92■□□□□ 0.62
MSLN-207ENST00000566549 CCSER2Q9H7U1 834 aa18.92■□□□□ 0.62
MSLN-207ENST00000566549 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.92■□□□□ 0.62
MSLN-207ENST00000566549 G3BP2Q9UN86 482 aaKnown RBP18.92■□□□□ 0.62
MSLN-207ENST00000566549 EIF4E1BA6NMX2 242 aaKnown RBP18.92■□□□□ 0.62
MSLN-207ENST00000566549 ATP5BP06576 529 aaKnown RBP18.92■□□□□ 0.62
MSLN-207ENST00000566549 ALOX15P16050 662 aaPredicted RBP18.92■□□□□ 0.62
MSLN-207ENST00000566549 PAMP19021 973 aa18.92■□□□□ 0.62
MSLN-207ENST00000566549 ELF1P32519 619 aa18.92■□□□□ 0.62
MSLN-207ENST00000566549 CSRP3P50461 194 aa18.92■□□□□ 0.62
MSLN-207ENST00000566549 TAS2R39P59534 338 aa18.92■□□□□ 0.62
MSLN-207ENST00000566549 NRG1Q02297 640 aaPredicted RBP18.92■□□□□ 0.62
MSLN-207ENST00000566549 HNRNPDQ14103 355 aaKnown RBP18.92■□□□□ 0.62
MSLN-207ENST00000566549 RBM20Q5T481 1227 aaKnown RBP18.92■□□□□ 0.62
MSLN-207ENST00000566549 TRIM68Q6AZZ1 485 aa18.92■□□□□ 0.62
MSLN-207ENST00000566549 CNSTQ6PJW8 725 aa18.92■□□□□ 0.62
MSLN-207ENST00000566549 ZYG11AQ6WRX3 759 aa18.92■□□□□ 0.62
MSLN-207ENST00000566549 LRRC8DQ7L1W4 858 aa18.92■□□□□ 0.62
MSLN-207ENST00000566549 ARHGAP18Q8N392 663 aa18.92■□□□□ 0.62
MSLN-207ENST00000566549 ATP6V0D2Q8N8Y2 350 aa18.92■□□□□ 0.62
MSLN-207ENST00000566549 OR52B2Q96RD2 323 aa18.92■□□□□ 0.62
MSLN-207ENST00000566549 WDR55Q9H6Y2 383 aaPredicted RBP18.92■□□□□ 0.62
MSLN-207ENST00000566549 TMEM161AQ9NX61 479 aa18.92■□□□□ 0.62
MSLN-207ENST00000566549 ANKRD6Q9Y2G4 727 aa18.92■□□□□ 0.62
MSLN-207ENST00000566549 MOXD2PA6NHM9 499 aa18.91■□□□□ 0.62
MSLN-207ENST00000566549 WASH4PA8MWX3 477 aa18.91■□□□□ 0.62
MSLN-207ENST00000566549 SYN3O14994 580 aa18.91■□□□□ 0.62
MSLN-207ENST00000566549 NBNO60934 754 aa18.91■□□□□ 0.62
MSLN-207ENST00000566549 TRPA1O75762 1119 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms