RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 AADATQ8N5Z0 425 aa2.39□□□□□ -2.03
SMG1-212ENST00000566328 TRIB2Q92519 343 aa2.39□□□□□ -2.03
SMG1-212ENST00000566328 LRFN5Q96NI6 719 aa2.39□□□□□ -2.03
SMG1-212ENST00000566328 MECRQ9BV79 373 aa2.39□□□□□ -2.03
SMG1-212ENST00000566328 TP63Q9H3D4 680 aaPredicted RBP2.39□□□□□ -2.03
SMG1-212ENST00000566328 ZNF696Q9H7X3 374 aa2.39□□□□□ -2.03
SMG1-212ENST00000566328 ZFP57Q9NU63 452 aa2.39□□□□□ -2.03
SMG1-212ENST00000566328 PHTF1Q9UMS5 762 aa2.39□□□□□ -2.03
SMG1-212ENST00000566328 DHDHQ9UQ10 334 aa2.39□□□□□ -2.03
SMG1-212ENST00000566328 MORC2Q9Y6X9 1032 aaPredicted RBP2.39□□□□□ -2.03
SMG1-212ENST00000566328 EFCAB8A8MWE9 144 aa2.38□□□□□ -2.03
SMG1-212ENST00000566328 C16orf97H3BN30 126 aa2.38□□□□□ -2.03
SMG1-212ENST00000566328 GRM8O00222 908 aa2.38□□□□□ -2.03
SMG1-212ENST00000566328 TIMM23O14925 209 aa2.38□□□□□ -2.03
SMG1-212ENST00000566328 EXTL3O43909 919 aa2.38□□□□□ -2.03
SMG1-212ENST00000566328 TFRCP02786 760 aaKnown RBP2.38□□□□□ -2.03
SMG1-212ENST00000566328 SLC5A1P13866 664 aa2.38□□□□□ -2.03
SMG1-212ENST00000566328 AZU1P20160 251 aa2.38□□□□□ -2.03
SMG1-212ENST00000566328 IL15P40933 162 aaPredicted RBP2.38□□□□□ -2.03
SMG1-212ENST00000566328 CDK7P50613 346 aa2.38□□□□□ -2.03
SMG1-212ENST00000566328 ZBTB17Q13105 803 aa2.38□□□□□ -2.03
SMG1-212ENST00000566328 TNFAIP1Q13829 316 aa2.38□□□□□ -2.03
SMG1-212ENST00000566328 KRT72Q14CN4 511 aa2.38□□□□□ -2.03
SMG1-212ENST00000566328 TMEM30BQ3MIR4 351 aa2.38□□□□□ -2.03
SMG1-212ENST00000566328 FAM209BQ5JX69 171 aa2.38□□□□□ -2.03
SMG1-212ENST00000566328 FAM122CQ6P4D5 195 aa2.38□□□□□ -2.03
SMG1-212ENST00000566328 SH2D6Q7Z4S9 175 aa2.38□□□□□ -2.03
SMG1-212ENST00000566328 GATAD2AQ86YP4 633 aa2.38□□□□□ -2.03
SMG1-212ENST00000566328 EPHX4Q8IUS5 362 aa2.38□□□□□ -2.03
SMG1-212ENST00000566328 OR13A1Q8NGR1 328 aa2.38□□□□□ -2.03
SMG1-212ENST00000566328 STT3BQ8TCJ2 826 aa2.38□□□□□ -2.03
SMG1-212ENST00000566328 GPT2Q8TD30 523 aa2.38□□□□□ -2.03
SMG1-212ENST00000566328 KCNJ9Q92806 393 aa2.38□□□□□ -2.03
SMG1-212ENST00000566328 TBCBQ99426 244 aa2.38□□□□□ -2.03
SMG1-212ENST00000566328 PRPF18Q99633 342 aaKnown RBP2.38□□□□□ -2.03
SMG1-212ENST00000566328 MSTO1Q9BUK6 570 aa2.38□□□□□ -2.03
SMG1-212ENST00000566328 DDX43Q9NXZ2 648 aaKnown RBP2.38□□□□□ -2.03
SMG1-212ENST00000566328 ZNF224Q9NZL3 707 aa2.38□□□□□ -2.03
SMG1-212ENST00000566328 FBXO40Q9UH90 709 aa2.38□□□□□ -2.03
SMG1-212ENST00000566328 SNX9Q9Y5X1 595 aa2.38□□□□□ -2.03
SMG1-212ENST00000566328 TP53BP1Q12888 1972 aaPredicted RBP2.38□□□□□ -2.03
SMG1-212ENST00000566328 A0A1W2PS18 150 aa2.37□□□□□ -2.03
SMG1-212ENST00000566328 DNPH1O43598 174 aa2.37□□□□□ -2.03
SMG1-212ENST00000566328 STRNO43815 780 aa2.37□□□□□ -2.03
SMG1-212ENST00000566328 BAG4O95429 457 aaKnown RBP2.37□□□□□ -2.03
SMG1-212ENST00000566328 PRSS1P07477 247 aa2.37□□□□□ -2.03
SMG1-212ENST00000566328 SSTR2P30874 369 aa2.37□□□□□ -2.03
SMG1-212ENST00000566328 DCTDP32321 178 aa2.37□□□□□ -2.03
SMG1-212ENST00000566328 TIMP3P35625 211 aa2.37□□□□□ -2.03
SMG1-212ENST00000566328 RPS6KA3P51812 740 aa2.37□□□□□ -2.03
SMG1-212ENST00000566328 NR0B1P51843 470 aaKnown RBP2.37□□□□□ -2.03
SMG1-212ENST00000566328 FAM27E3Q08E93 113 aa2.37□□□□□ -2.03
SMG1-212ENST00000566328 TRIM60Q495X7 471 aa2.37□□□□□ -2.03
SMG1-212ENST00000566328 SETMARQ53H47 684 aaPredicted RBP2.37□□□□□ -2.03
SMG1-212ENST00000566328 NAPEPLDQ6IQ20 393 aa2.37□□□□□ -2.03
SMG1-212ENST00000566328 KIAA1324Q6UXG2 1013 aaKnown RBP2.37□□□□□ -2.03
SMG1-212ENST00000566328 RNF144BQ7Z419 303 aa2.37□□□□□ -2.03
SMG1-212ENST00000566328 GALNT7Q86SF2 657 aa2.37□□□□□ -2.03
SMG1-212ENST00000566328 TRIM74Q86UV6 250 aa2.37□□□□□ -2.03
SMG1-212ENST00000566328 TRIM73Q86UV7 250 aa2.37□□□□□ -2.03
SMG1-212ENST00000566328 METTL27Q8N6F8 245 aaPredicted RBP2.37□□□□□ -2.03
SMG1-212ENST00000566328 ZNF441Q8N8Z8 693 aa2.37□□□□□ -2.03
SMG1-212ENST00000566328 TTC8Q8TAM2 541 aa2.37□□□□□ -2.03
SMG1-212ENST00000566328 LNX1Q8TBB1 728 aaPredicted RBP2.37□□□□□ -2.03
SMG1-212ENST00000566328 TAS1R2Q8TE23 839 aa2.37□□□□□ -2.03
SMG1-212ENST00000566328 C2CD4CQ8TF44 421 aa2.37□□□□□ -2.03
SMG1-212ENST00000566328 JDP2Q8WYK2 163 aa2.37□□□□□ -2.03
SMG1-212ENST00000566328 FIG4Q92562 907 aa2.37□□□□□ -2.03
SMG1-212ENST00000566328 OTULINQ96BN8 352 aa2.37□□□□□ -2.03
SMG1-212ENST00000566328 PIGSQ96S52 555 aa2.37□□□□□ -2.03
SMG1-212ENST00000566328 PYGO2Q9BRQ0 406 aa2.37□□□□□ -2.03
SMG1-212ENST00000566328 FBRSL1Q9HCM7 1045 aaKnown RBP2.37□□□□□ -2.03
SMG1-212ENST00000566328 SLC22A11Q9NSA0 550 aa2.37□□□□□ -2.03
SMG1-212ENST00000566328 GRHL1Q9NZI5 618 aa2.37□□□□□ -2.03
SMG1-212ENST00000566328 SIX4Q9UIU6 781 aa2.37□□□□□ -2.03
SMG1-212ENST00000566328 BAG5Q9UL15 447 aa2.37□□□□□ -2.03
SMG1-212ENST00000566328 A0A0A0MQY5 61 aa2.36□□□□□ -2.03
SMG1-212ENST00000566328 hDV102S1A0JD36 115 aa2.36□□□□□ -2.03
SMG1-212ENST00000566328 NPIPB13A6NJU9 1138 aa2.36□□□□□ -2.03
SMG1-212ENST00000566328 NPIPB5A8MRT5 1133 aa2.36□□□□□ -2.03
SMG1-212ENST00000566328 NPIPB4C9JG80 1138 aa2.36□□□□□ -2.03
SMG1-212ENST00000566328 SYT5O00445 386 aa2.36□□□□□ -2.03
SMG1-212ENST00000566328 PIP5K1BO14986 540 aa2.36□□□□□ -2.03
SMG1-212ENST00000566328 HNRNPRO43390 633 aaKnown RBP2.36□□□□□ -2.03
SMG1-212ENST00000566328 KDM4BO94953 1096 aa2.36□□□□□ -2.03
SMG1-212ENST00000566328 CLDN14O95500 239 aa2.36□□□□□ -2.03
SMG1-212ENST00000566328 CYP4B1P13584 511 aa2.36□□□□□ -2.03
SMG1-212ENST00000566328 TNFSF4P23510 183 aa2.36□□□□□ -2.03
SMG1-212ENST00000566328 MARK3P27448 753 aa2.36□□□□□ -2.03
SMG1-212ENST00000566328 CLCN3P51790 818 aa2.36□□□□□ -2.03
SMG1-212ENST00000566328 PLEKHG6Q3KR16 790 aa2.36□□□□□ -2.03
SMG1-212ENST00000566328 ATPAF1Q5TC12 328 aaPredicted RBP2.36□□□□□ -2.03
SMG1-212ENST00000566328 FAM69BQ5VUD6 431 aa2.36□□□□□ -2.03
SMG1-212ENST00000566328 KRTAP7-1Q8IUC3 87 aa2.36□□□□□ -2.03
SMG1-212ENST00000566328 SCN4BQ8IWT1 228 aa2.36□□□□□ -2.03
SMG1-212ENST00000566328 SCAIQ8N9R8 606 aa2.36□□□□□ -2.03
SMG1-212ENST00000566328 CNBD1Q8NA66 436 aa2.36□□□□□ -2.03
SMG1-212ENST00000566328 DMBX1Q8NFW5 382 aa2.36□□□□□ -2.03
SMG1-212ENST00000566328 FAM76AQ8TAV0 307 aa2.36□□□□□ -2.03
SMG1-212ENST00000566328 SLC2A12Q8TD20 617 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms