RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 HECAQ9UBI9 543 aaPredicted RBP14.07□□□□□ -0.16
HERPUD1-210ENST00000565966 ALG6Q9Y672 507 aa14.07□□□□□ -0.16
HERPUD1-210ENST00000565966 TBC1D3DA0A087WVF3 549 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 TBC1D3IA0A087WXS9 549 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 TBC1D3EA0A087X179 549 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 TBC1D3KA0A087X1G2 549 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 A0A0U1RQJ8 604 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 TBC1D3FA6NER0 549 aaPredicted RBP14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 TBC1D3LB9A6J9 549 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 KPNA3O00505 521 aaPredicted RBP14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 BCAT2O15382 392 aaPredicted RBP14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 SPOPO43791 374 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 LEFTY1O75610 366 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 GSRP00390 522 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 SYPP08247 313 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 TBC1D3HP0C7X1 549 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 ENGP17813 658 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 PAPOLAP51003 745 aaKnown RBP14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 CCNHP51946 323 aaPredicted RBP14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 ADPRHP54922 357 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 SNRPD1P62314 119 aaKnown RBP14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 CNTN1Q12860 1018 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 POM121L1PQ3SYA9 428 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 ZFYVE27Q5T4F4 411 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 TBC1D3GQ6DHY5 549 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 TBC1D3CQ6IPX1 549 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 TMCO3Q6UWJ1 677 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 MAP7D3Q8IWC1 876 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 TP53INP2Q8IXH6 220 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 RHOT1Q8IXI2 618 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 TBC1D3Q8IZP1 549 aaPredicted RBP14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 ZCCHC9Q8N567 271 aaKnown RBP14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 CCDC112Q8NEF3 446 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 OR2AP1Q8NGE2 309 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 PCDH19Q8TAB3 1148 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 C1orf216Q8TAB5 229 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 RAPGEF5Q92565 580 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 FAF2Q96CS3 445 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 PPP1R16AQ96I34 528 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 LRIG1Q96JA1 1093 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 ZNF670Q9BS34 389 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 CALN1Q9BXU9 219 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 TM6SF2Q9BZW4 377 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 TMEM9BQ9NQ34 198 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 TPX2Q9ULW0 747 aaKnown RBP14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 ADGRG1Q9Y653 693 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 WASF2Q9Y6W5 498 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 DNAH14Q0VDD8 3507 aa14.06□□□□□ -0.16
HERPUD1-210ENST00000565966 LRRD1A4D1F6 860 aa14.05□□□□□ -0.16
HERPUD1-210ENST00000565966 C3orf70A6NLC5 250 aaPredicted RBP14.05□□□□□ -0.16
HERPUD1-210ENST00000565966 C4orf47A7E2U8 309 aa14.05□□□□□ -0.16
HERPUD1-210ENST00000565966 C10orf142B7Z368 130 aa14.05□□□□□ -0.16
HERPUD1-210ENST00000565966 J3KR12 359 aa14.05□□□□□ -0.16
HERPUD1-210ENST00000565966 PLK4O00444 970 aa14.05□□□□□ -0.16
HERPUD1-210ENST00000565966 ARHGAP33O14559 1287 aa14.05□□□□□ -0.16
HERPUD1-210ENST00000565966 CDX4O14627 284 aaPredicted RBP14.05□□□□□ -0.16
HERPUD1-210ENST00000565966 ARHGAP6O43182 974 aa14.05□□□□□ -0.16
HERPUD1-210ENST00000565966 PLRG1O43660 514 aaKnown RBP14.05□□□□□ -0.16
HERPUD1-210ENST00000565966 PRAMEF11O60813 436 aa14.05□□□□□ -0.16
HERPUD1-210ENST00000565966 TMCC1O94876 653 aa14.05□□□□□ -0.16
HERPUD1-210ENST00000565966 POP4O95707 220 aaKnown RBP14.05□□□□□ -0.16
HERPUD1-210ENST00000565966 IGHV4-34P06331 123 aa14.05□□□□□ -0.16
HERPUD1-210ENST00000565966 TNNT1P13805 278 aa14.05□□□□□ -0.16
HERPUD1-210ENST00000565966 CD27P26842 260 aa14.05□□□□□ -0.16
HERPUD1-210ENST00000565966 CCR5P51681 352 aa14.05□□□□□ -0.16
HERPUD1-210ENST00000565966 ATXN3P54252 364 aaPredicted RBP14.05□□□□□ -0.16
HERPUD1-210ENST00000565966 ANKRD20A8PQ5CZ79 823 aa14.05□□□□□ -0.16
HERPUD1-210ENST00000565966 AGBL4Q5VU57 503 aa14.05□□□□□ -0.16
HERPUD1-210ENST00000565966 DAAM2Q86T65 1068 aa14.05□□□□□ -0.16
HERPUD1-210ENST00000565966 TXLNBQ8N3L3 684 aa14.05□□□□□ -0.16
HERPUD1-210ENST00000565966 RYBPQ8N488 228 aaPredicted RBP14.05□□□□□ -0.16
HERPUD1-210ENST00000565966 GRIN3AQ8TCU5 1115 aa14.05□□□□□ -0.16
HERPUD1-210ENST00000565966 ARRDC3Q96B67 414 aa14.05□□□□□ -0.16
HERPUD1-210ENST00000565966 CALR3Q96L12 384 aaKnown RBP14.05□□□□□ -0.16
HERPUD1-210ENST00000565966 PDFQ9HBH1 243 aa14.05□□□□□ -0.16
HERPUD1-210ENST00000565966 UBA2Q9UBT2 640 aaPredicted RBP14.05□□□□□ -0.16
HERPUD1-210ENST00000565966 TRIM10Q9UDY6 481 aa14.05□□□□□ -0.16
HERPUD1-210ENST00000565966 A0A1W2PPC4 97 aa14.04□□□□□ -0.16
HERPUD1-210ENST00000565966 DFFAO00273 331 aa14.04□□□□□ -0.16
HERPUD1-210ENST00000565966 KRT1P04264 644 aa14.04□□□□□ -0.16
HERPUD1-210ENST00000565966 NAP1L1P55209 391 aaKnown RBP14.04□□□□□ -0.16
HERPUD1-210ENST00000565966 RHOAP61586 193 aa14.04□□□□□ -0.16
HERPUD1-210ENST00000565966 CCZ1BP86790 482 aa14.04□□□□□ -0.16
HERPUD1-210ENST00000565966 CCZ1P86791 482 aaPredicted RBP14.04□□□□□ -0.16
HERPUD1-210ENST00000565966 RAD51Q06609 339 aa14.04□□□□□ -0.16
HERPUD1-210ENST00000565966 KIF5AQ12840 1032 aa14.04□□□□□ -0.16
HERPUD1-210ENST00000565966 CYTH1Q15438 398 aa14.04□□□□□ -0.16
HERPUD1-210ENST00000565966 MYLK3Q32MK0 819 aa14.04□□□□□ -0.16
HERPUD1-210ENST00000565966 PIP5KL1Q5T9C9 394 aa14.04□□□□□ -0.16
HERPUD1-210ENST00000565966 NCBP2-AS2Q69YL0 99 aa14.04□□□□□ -0.16
HERPUD1-210ENST00000565966 ARHGAP36Q6ZRI8 547 aa14.04□□□□□ -0.16
HERPUD1-210ENST00000565966 ERN2Q76MJ5 926 aaKnown RBP14.04□□□□□ -0.16
HERPUD1-210ENST00000565966 PQLC3Q8N755 202 aa14.04□□□□□ -0.16
HERPUD1-210ENST00000565966 GDAP1L1Q96MZ0 367 aa14.04□□□□□ -0.16
HERPUD1-210ENST00000565966 RNF157Q96PX1 679 aa14.04□□□□□ -0.16
HERPUD1-210ENST00000565966 HDAC8Q9BY41 377 aa14.04□□□□□ -0.16
HERPUD1-210ENST00000565966 ZDHHC5Q9C0B5 715 aa14.04□□□□□ -0.16
HERPUD1-210ENST00000565966 ZDHHC6Q9H6R6 413 aa14.04□□□□□ -0.16
HERPUD1-210ENST00000565966 FSCN3Q9NQT6 498 aa14.04□□□□□ -0.16
HERPUD1-210ENST00000565966 DDX56Q9NY93 547 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms