RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 FAM83EQ2M2I3 478 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 ZNF667Q5HYK9 610 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 LYPLAL1Q5VWZ2 237 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 TAF2Q6P1X5 1199 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 XYLT1Q86Y38 959 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 PPP1R14BQ96C90 147 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 QRFPRQ96P65 431 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 TRMOQ9BU70 441 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 HDHD5Q9BXW7 423 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 ADGRE3Q9BY15 652 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 ROPN1BQ9BZX4 212 aaPredicted RBP3.4□□□□□ -1.87
CHD9-213ENST00000564845 C20orf27Q9GZN8 174 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 ROPN1Q9HAT0 212 aaPredicted RBP3.4□□□□□ -1.87
CHD9-213ENST00000564845 RAB6BQ9NRW1 208 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.4□□□□□ -1.87
CHD9-213ENST00000564845 SOX13Q9UN79 622 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 GMEB1Q9Y692 573 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 SQORQ9Y6N5 450 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 GRXCR1A8MXD5 290 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 PCDH17O14917 1159 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 PER2O15055 1255 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 TOM1L1O75674 476 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 ITGA2P17301 1181 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 ARL2P36404 184 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 NAMPTP43490 491 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 AKR1D1P51857 326 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 USP46P62068 366 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 MFSD10Q14728 455 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 CBX2Q14781 532 aaPredicted RBP3.4□□□□□ -1.87
CHD9-213ENST00000564845 HABP4Q5JVS0 413 aaKnown RBP3.4□□□□□ -1.87
CHD9-213ENST00000564845 CMC1Q7Z7K0 106 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 PACS2Q86VP3 889 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 TICAM1Q8IUC6 712 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 FTMTQ8N4E7 242 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 TMEM35BQ8NCS4 154 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 SMG8Q8ND04 991 aaKnown RBP3.4□□□□□ -1.87
CHD9-213ENST00000564845 FBXO36Q8NEA4 188 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 SLC22A17Q8WUG5 538 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 DLG3Q92796 817 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 MYLK2Q9H1R3 596 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 CAPN7Q9Y6W3 813 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 SAGE2PA6NJ88 616 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 AGR2O95994 175 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 MPP3Q13368 585 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 TMEM132DQ14C87 1099 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 LRRC23Q53EV4 343 aaPredicted RBP3.4□□□□□ -1.87
CHD9-213ENST00000564845 IYDQ6PHW0 289 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 RSPO2Q6UXX9 243 aaPredicted RBP3.4□□□□□ -1.87
CHD9-213ENST00000564845 CDKL3Q8IVW4 592 aaPredicted RBP3.4□□□□□ -1.87
CHD9-213ENST00000564845 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.4□□□□□ -1.87
CHD9-213ENST00000564845 BHLHE22Q8NFJ8 381 aaPredicted RBP3.4□□□□□ -1.87
CHD9-213ENST00000564845 BEST2Q8NFU1 509 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 ACTL9Q8TC94 416 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 PTPRN2Q92932 1015 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 GPRASP2Q96D09 838 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 ZNF512Q96ME7 567 aaPredicted RBP3.4□□□□□ -1.87
CHD9-213ENST00000564845 CHCHD6Q9BRQ6 235 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 NPHS2Q9NP85 383 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 GID8Q9NWU2 228 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 USP18Q9UMW8 372 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 PCDHGC3Q9UN70 934 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 ADAMTS5Q9UNA0 930 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 PSAT1Q9Y617 370 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 OTOFQ9HC10 1997 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 FAM234BA2RU67 622 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 YJEFN3A6XGL0 299 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 NEMP1O14524 444 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 CD3EAPO15446 510 aaKnown RBP3.4□□□□□ -1.87
CHD9-213ENST00000564845 SYNCRIPO60506 623 aaKnown RBP3.4□□□□□ -1.87
CHD9-213ENST00000564845 METTL18O95568 372 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 TCN1P20061 433 aaPredicted RBP3.4□□□□□ -1.87
CHD9-213ENST00000564845 CXCR2P25025 360 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 CSNK2BP67870 215 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 DUOXA2Q1HG44 320 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 ZNF792Q3KQV3 632 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 ZACNQ401N2 412 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 NAPEPLDQ6IQ20 393 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 MPZL3Q6UWV2 235 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 UTS2BQ765I0 119 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 TRMT10CQ7L0Y3 403 aaKnown RBP3.4□□□□□ -1.87
CHD9-213ENST00000564845 RYBPQ8N488 228 aaPredicted RBP3.4□□□□□ -1.87
CHD9-213ENST00000564845 DTX3Q8N9I9 347 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 KLHDC9Q8NEP7 349 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 MCOLN3Q8TDD5 553 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 KCTD13Q8WZ19 329 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 SHC3Q92529 594 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 RACGAP1Q9H0H5 632 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 PADI3Q9ULW8 664 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 RRP15Q9Y3B9 282 aaKnown RBP3.4□□□□□ -1.87
CHD9-213ENST00000564845 HCFC2Q9Y5Z7 792 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 DGKIO75912 1065 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 PRKAR2AP13861 404 aaKnown RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 TARSP26639 723 aaKnown RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 GRIK1P39086 918 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 MASP1P48740 699 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 STAT4Q14765 748 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 TAB1Q15750 504 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 EFHC2Q5JST6 749 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 SLC13A5Q86YT5 568 aaPredicted RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 ZNF398Q8TD17 642 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms