RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 SERINC3Q13530 473 aa16.86■□□□□ 0.29
CDT1-202ENST00000562747 TXNRD3NBQ6F5E7 133 aa16.86■□□□□ 0.29
CDT1-202ENST00000562747 C19orf48Q6RUI8 117 aa16.86■□□□□ 0.29
CDT1-202ENST00000562747 SLCO6A1Q86UG4 719 aa16.86■□□□□ 0.29
CDT1-202ENST00000562747 TMTC1Q8IUR5 882 aa16.86■□□□□ 0.29
CDT1-202ENST00000562747 LZTR1Q8N653 840 aa16.86■□□□□ 0.29
CDT1-202ENST00000562747 TMIEQ8NEW7 156 aa16.86■□□□□ 0.29
CDT1-202ENST00000562747 PIP4K2CQ8TBX8 421 aa16.86■□□□□ 0.29
CDT1-202ENST00000562747 FAM71BQ8TC56 605 aa16.86■□□□□ 0.29
CDT1-202ENST00000562747 PCDH18Q9HCL0 1135 aa16.86■□□□□ 0.29
CDT1-202ENST00000562747 LUC7LQ9NQ29 371 aaKnown RBP16.86■□□□□ 0.29
CDT1-202ENST00000562747 RCOR3Q9P2K3 495 aaPredicted RBP16.86■□□□□ 0.29
CDT1-202ENST00000562747 IMPACTQ9P2X3 320 aa16.86■□□□□ 0.29
CDT1-202ENST00000562747 PCOLCE2Q9UKZ9 415 aa16.86■□□□□ 0.29
CDT1-202ENST00000562747 SARDHQ9UL12 918 aa16.86■□□□□ 0.29
CDT1-202ENST00000562747 FCF1Q9Y324 198 aaKnown RBP16.86■□□□□ 0.29
CDT1-202ENST00000562747 SLCO1B1Q9Y6L6 691 aa16.86■□□□□ 0.29
CDT1-202ENST00000562747 TMEM131Q92545 1883 aa16.86■□□□□ 0.29
CDT1-202ENST00000562747 CELSR3Q9NYQ7 3312 aa16.85■□□□□ 0.29
CDT1-202ENST00000562747 A0A1B0GTW7 788 aa16.85■□□□□ 0.29
CDT1-202ENST00000562747 ARHGAP42A6NI28 874 aa16.85■□□□□ 0.29
CDT1-202ENST00000562747 BUB1O43683 1085 aa16.85■□□□□ 0.29
CDT1-202ENST00000562747 RNASEH2AO75792 299 aaKnown RBP16.85■□□□□ 0.29
CDT1-202ENST00000562747 PRNPP04156 253 aa16.85■□□□□ 0.29
CDT1-202ENST00000562747 KRT7P08729 469 aa16.85■□□□□ 0.29
CDT1-202ENST00000562747 GNSP15586 552 aa16.85■□□□□ 0.29
CDT1-202ENST00000562747 CHRNA3P32297 505 aa16.85■□□□□ 0.29
CDT1-202ENST00000562747 SPA17Q15506 151 aa16.85■□□□□ 0.29
CDT1-202ENST00000562747 INO80DQ53TQ3 878 aaPredicted RBP16.85■□□□□ 0.29
CDT1-202ENST00000562747 CARD16Q5EG05 197 aa16.85■□□□□ 0.29
CDT1-202ENST00000562747 DCAF12L1Q5VU92 463 aa16.85■□□□□ 0.29
CDT1-202ENST00000562747 AFMIDQ63HM1 303 aa16.85■□□□□ 0.29
CDT1-202ENST00000562747 CCNI2Q6ZMN8 369 aaPredicted RBP16.85■□□□□ 0.29
CDT1-202ENST00000562747 AADATQ8N5Z0 425 aa16.85■□□□□ 0.29
CDT1-202ENST00000562747 FAM131CQ96AQ9 280 aa16.85■□□□□ 0.29
CDT1-202ENST00000562747 CSPG4P5Q96PW8 444 aa16.85■□□□□ 0.29
CDT1-202ENST00000562747 SLC39A8Q9C0K1 460 aa16.85■□□□□ 0.29
CDT1-202ENST00000562747 KLC2Q9H0B6 622 aa16.85■□□□□ 0.29
CDT1-202ENST00000562747 MIR1-1HGQ9H1L0 117 aa16.85■□□□□ 0.29
CDT1-202ENST00000562747 NEUROG2Q9H2A3 272 aa16.85■□□□□ 0.29
CDT1-202ENST00000562747 TNKS2Q9H2K2 1166 aa16.85■□□□□ 0.29
CDT1-202ENST00000562747 SERGEFQ9UGK8 458 aa16.85■□□□□ 0.29
CDT1-202ENST00000562747 FNDC3AQ9Y2H6 1198 aaKnown RBP16.85■□□□□ 0.29
CDT1-202ENST00000562747 PCDHB9Q9Y5E1 797 aa16.85■□□□□ 0.29
CDT1-202ENST00000562747 ACTL7AQ9Y615 435 aa16.85■□□□□ 0.29
CDT1-202ENST00000562747 SMG1Q96Q15 3661 aaKnown RBP16.84■□□□□ 0.29
CDT1-202ENST00000562747 SLC7A4O43246 635 aa16.84■□□□□ 0.29
CDT1-202ENST00000562747 CTSLP07711 333 aa16.84■□□□□ 0.29
CDT1-202ENST00000562747 DRD3P35462 400 aa16.84■□□□□ 0.29
CDT1-202ENST00000562747 CDH6P55285 790 aa16.84■□□□□ 0.29
CDT1-202ENST00000562747 KRT81Q14533 505 aa16.84■□□□□ 0.29
CDT1-202ENST00000562747 MESDQ14696 234 aa16.84■□□□□ 0.29
CDT1-202ENST00000562747 DPY19L3Q6ZPD9 716 aa16.84■□□□□ 0.29
CDT1-202ENST00000562747 ARHGAP12Q8IWW6 846 aa16.84■□□□□ 0.29
CDT1-202ENST00000562747 BAHD1Q8TBE0 780 aaPredicted RBP16.84■□□□□ 0.29
CDT1-202ENST00000562747 MDM1Q8TC05 714 aa16.84■□□□□ 0.29
CDT1-202ENST00000562747 TSC1Q92574 1164 aa16.84■□□□□ 0.29
CDT1-202ENST00000562747 CELF6Q96J87 481 aaKnown RBP16.84■□□□□ 0.29
CDT1-202ENST00000562747 HEPHQ9BQS7 1158 aa16.84■□□□□ 0.29
CDT1-202ENST00000562747 ZDHHC5Q9C0B5 715 aa16.84■□□□□ 0.29
CDT1-202ENST00000562747 C6orf106Q9H6K1 298 aaPredicted RBP16.84■□□□□ 0.29
CDT1-202ENST00000562747 IL36AQ9UHA7 158 aa16.84■□□□□ 0.29
CDT1-202ENST00000562747 PCDHA13Q9Y5I0 950 aa16.84■□□□□ 0.29
CDT1-202ENST00000562747 IGSF10Q6WRI0 2623 aa16.83■□□□□ 0.29
CDT1-202ENST00000562747 LRRC72A6NJI9 287 aa16.83■□□□□ 0.28
CDT1-202ENST00000562747 TMEM110-MUSTN1A8MSY1 372 aa16.83■□□□□ 0.28
CDT1-202ENST00000562747 TMCC1O94876 653 aa16.83■□□□□ 0.28
CDT1-202ENST00000562747 NDUFA10O95299 355 aa16.83■□□□□ 0.28
CDT1-202ENST00000562747 GSRP00390 522 aa16.83■□□□□ 0.28
CDT1-202ENST00000562747 AMPD1P23109 780 aa16.83■□□□□ 0.28
CDT1-202ENST00000562747 PAPOLAP51003 745 aaKnown RBP16.83■□□□□ 0.28
CDT1-202ENST00000562747 DNA2P51530 1060 aa16.83■□□□□ 0.28
CDT1-202ENST00000562747 ARSEP51690 589 aa16.83■□□□□ 0.28
CDT1-202ENST00000562747 CCNHP51946 323 aaPredicted RBP16.83■□□□□ 0.28
CDT1-202ENST00000562747 HADHBP55084 474 aaKnown RBP16.83■□□□□ 0.28
CDT1-202ENST00000562747 TAS2R40P59535 323 aa16.83■□□□□ 0.28
CDT1-202ENST00000562747 SNRPD1P62314 119 aaKnown RBP16.83■□□□□ 0.28
CDT1-202ENST00000562747 CCDC15Q0P6D6 951 aa16.83■□□□□ 0.28
CDT1-202ENST00000562747 TP53BP1Q12888 1972 aaPredicted RBP16.83■□□□□ 0.28
CDT1-202ENST00000562747 PDK2Q15119 407 aa16.83■□□□□ 0.28
CDT1-202ENST00000562747 TMCO3Q6UWJ1 677 aa16.83■□□□□ 0.28
CDT1-202ENST00000562747 GLRX5Q86SX6 157 aa16.83■□□□□ 0.28
CDT1-202ENST00000562747 MARCH9Q86YJ5 346 aa16.83■□□□□ 0.28
CDT1-202ENST00000562747 CPNE8Q86YQ8 564 aa16.83■□□□□ 0.28
CDT1-202ENST00000562747 NPWQ8N729 165 aa16.83■□□□□ 0.28
CDT1-202ENST00000562747 CHST14Q8NCH0 376 aa16.83■□□□□ 0.28
CDT1-202ENST00000562747 OR2AP1Q8NGE2 309 aa16.83■□□□□ 0.28
CDT1-202ENST00000562747 OR2T34Q8NGX1 318 aa16.83■□□□□ 0.28
CDT1-202ENST00000562747 C1orf216Q8TAB5 229 aa16.83■□□□□ 0.28
CDT1-202ENST00000562747 KDM4CQ9H3R0 1056 aa16.83■□□□□ 0.28
CDT1-202ENST00000562747 GAREM1Q9H706 876 aa16.83■□□□□ 0.28
CDT1-202ENST00000562747 PDFQ9HBH1 243 aa16.83■□□□□ 0.28
CDT1-202ENST00000562747 TOR4AQ9NXH8 423 aa16.83■□□□□ 0.28
CDT1-202ENST00000562747 EIF2B4Q9UI10 523 aaKnown RBP16.83■□□□□ 0.28
CDT1-202ENST00000562747 TPX2Q9ULW0 747 aaKnown RBP16.83■□□□□ 0.28
CDT1-202ENST00000562747 EPN1Q9Y6I3 576 aaPredicted RBP16.83■□□□□ 0.28
CDT1-202ENST00000562747 NUMA1Q14980 2115 aa16.82■□□□□ 0.28
CDT1-202ENST00000562747 LOC400499M0QZD8 3231 aa16.82■□□□□ 0.28
CDT1-202ENST00000562747 A0A0A6YYK5 440 aaPredicted RBP16.82■□□□□ 0.28
CDT1-202ENST00000562747 SOWAHDA6NJG2 315 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms