RNA–Protein interactions for RNA: ENST00000560881.5

RPL28-211, Transcript of ribosomal protein L28, humanhuman

TSL 5

Gene RPL28, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-211ENST00000560881 PGBD5Q8N414 524 aa16.92■□□□□ 0.3
RPL28-211ENST00000560881 HDDC3Q8N4P3 179 aa16.92■□□□□ 0.3
RPL28-211ENST00000560881 CASKIN2Q8WXE0 1202 aa16.92■□□□□ 0.3
RPL28-211ENST00000560881 GDAP1L1Q96MZ0 367 aa16.92■□□□□ 0.3
RPL28-211ENST00000560881 LAMA1P25391 3075 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 MIF4GDA9UHW6 222 aaKnown RBP16.91■□□□□ 0.3
RPL28-211ENST00000560881 ALOX15BO15296 676 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 IGSF6O95976 241 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 ADH1BP00325 375 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 GSRP00390 522 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 C5AR1P21730 350 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 CD6P30203 668 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 MAXP61244 160 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 RPL6Q02878 288 aaKnown RBP16.91■□□□□ 0.3
RPL28-211ENST00000560881 ZBTB16Q05516 673 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 PPP2R5EQ16537 467 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 DSG4Q86SJ6 1040 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 UBL4BQ8N7F7 174 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 CCNYQ8ND76 341 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 ARRDC3Q96B67 414 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 HDAC11Q96DB2 347 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 OLFM3Q96PB7 478 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 OMDQ99983 421 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 HEPHQ9BQS7 1158 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 NEUROG2Q9H2A3 272 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 WSB2Q9NYS7 404 aaPredicted RBP16.91■□□□□ 0.3
RPL28-211ENST00000560881 DOCK9Q9BZ29 2069 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 C1QTNF3-AMACRE9PGA6 284 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 MAP3K13O43283 966 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 PIGNO95427 931 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 IGLV3-19P01714 112 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 ZFXP17010 805 aaPredicted RBP16.91■□□□□ 0.3
RPL28-211ENST00000560881 TFDP2Q14188 446 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 ZNF235Q14590 738 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 MYLK3Q32MK0 819 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 PMS2CLQ68D20 193 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 ASCL5Q7RTU5 278 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 MYRIPQ8NFW9 859 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 NKD2Q969F2 451 aaPredicted RBP16.91■□□□□ 0.3
RPL28-211ENST00000560881 NSMCE3Q96MG7 304 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 ALS2CR12Q96Q35 445 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 FAM118BQ9BPY3 351 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 GPR174Q9BXC1 333 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 OSBPL8Q9BZF1 889 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 WDR87Q6ZQQ6 2873 aa16.91■□□□□ 0.3
RPL28-211ENST00000560881 RALGAPA1Q6GYQ0 2036 aa16.9■□□□□ 0.3
RPL28-211ENST00000560881 FAM47DPA6NHR8 397 aa16.9■□□□□ 0.3
RPL28-211ENST00000560881 KCNK1O00180 336 aa16.9■□□□□ 0.3
RPL28-211ENST00000560881 PRNPP04156 253 aa16.9■□□□□ 0.3
RPL28-211ENST00000560881 UGT2B4P06133 528 aa16.9■□□□□ 0.3
RPL28-211ENST00000560881 PTGER3P43115 390 aa16.9■□□□□ 0.3
RPL28-211ENST00000560881 CNTN1Q12860 1018 aa16.9■□□□□ 0.3
RPL28-211ENST00000560881 BYSLQ13895 437 aaKnown RBP16.9■□□□□ 0.3
RPL28-211ENST00000560881 RFTN1Q14699 578 aaPredicted RBP16.9■□□□□ 0.3
RPL28-211ENST00000560881 MEI1Q5TIA1 1274 aa16.9■□□□□ 0.3
RPL28-211ENST00000560881 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.9■□□□□ 0.3
RPL28-211ENST00000560881 ZNF599Q96NL3 588 aa16.9■□□□□ 0.3
RPL28-211ENST00000560881 CEP41Q9BYV8 373 aa16.9■□□□□ 0.3
RPL28-211ENST00000560881 SEPT3Q9UH03 358 aa16.9■□□□□ 0.3
RPL28-211ENST00000560881 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.9■□□□□ 0.33e-6■■□□□ 13.4
RPL28-211ENST00000560881 PROB1E7EW31 1015 aa16.89■□□□□ 0.29
RPL28-211ENST00000560881 LMNAP02545 664 aaKnown RBP16.89■□□□□ 0.29
RPL28-211ENST00000560881 MX2P20592 715 aa16.89■□□□□ 0.29
RPL28-211ENST00000560881 TGM2P21980 687 aa16.89■□□□□ 0.29
RPL28-211ENST00000560881 MMP13P45452 471 aa16.89■□□□□ 0.29
RPL28-211ENST00000560881 COPS2P61201 443 aa16.89■□□□□ 0.29
RPL28-211ENST00000560881 PPIDQ08752 370 aaKnown RBP16.89■□□□□ 0.29
RPL28-211ENST00000560881 AP1B1Q10567 949 aa16.89■□□□□ 0.29
RPL28-211ENST00000560881 MARC1Q5VT66 337 aa16.89■□□□□ 0.29
RPL28-211ENST00000560881 AGBL4Q5VU57 503 aa16.89■□□□□ 0.29
RPL28-211ENST00000560881 FAM46CQ5VWP2 391 aa16.89■□□□□ 0.29
RPL28-211ENST00000560881 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.89■□□□□ 0.29
RPL28-211ENST00000560881 BBS12Q6ZW61 710 aa16.89■□□□□ 0.29
RPL28-211ENST00000560881 ZC3H18Q86VM9 953 aaKnown RBP16.89■□□□□ 0.29
RPL28-211ENST00000560881 SLC41A1Q8IVJ1 513 aa16.89■□□□□ 0.29
RPL28-211ENST00000560881 PLPP6Q8IY26 295 aa16.89■□□□□ 0.29
RPL28-211ENST00000560881 TMIEQ8NEW7 156 aa16.89■□□□□ 0.29
RPL28-211ENST00000560881 TSGA13Q96PP4 275 aa16.89■□□□□ 0.29
RPL28-211ENST00000560881 PSKH2Q96QS6 385 aa16.89■□□□□ 0.29
RPL28-211ENST00000560881 BTBD1Q9H0C5 482 aa16.89■□□□□ 0.29
RPL28-211ENST00000560881 NT5MQ9NPB1 228 aa16.89■□□□□ 0.29
RPL28-211ENST00000560881 SCML1Q9UN30 329 aa16.89■□□□□ 0.29
RPL28-211ENST00000560881 TTLL3Q9Y4R7 772 aa16.89■□□□□ 0.29
RPL28-211ENST00000560881 OTOGLQ3ZCN5 2332 aa16.89■□□□□ 0.29
RPL28-211ENST00000560881 ATXN2Q99700 1313 aaKnown RBP16.88■□□□□ 0.29
RPL28-211ENST00000560881 PRR23AA6NEV1 266 aa16.88■□□□□ 0.29
RPL28-211ENST00000560881 MATN3O15232 486 aa16.88■□□□□ 0.29
RPL28-211ENST00000560881 NDUFS2O75306 463 aa16.88■□□□□ 0.29
RPL28-211ENST00000560881 POP4O95707 220 aaKnown RBP16.88■□□□□ 0.29
RPL28-211ENST00000560881 CCNCP24863 283 aa16.88■□□□□ 0.29
RPL28-211ENST00000560881 DHPSP49366 369 aaPredicted RBP16.88■□□□□ 0.29
RPL28-211ENST00000560881 SCNN1BP51168 640 aa16.88■□□□□ 0.29
RPL28-211ENST00000560881 ADPRHP54922 357 aa16.88■□□□□ 0.29
RPL28-211ENST00000560881 ZBTB17Q13105 803 aa16.88■□□□□ 0.29
RPL28-211ENST00000560881 ELF2Q15723 593 aa16.88■□□□□ 0.29
RPL28-211ENST00000560881 CCDC6Q16204 474 aa16.88■□□□□ 0.29
RPL28-211ENST00000560881 LRRC73Q5JTD7 316 aa16.88■□□□□ 0.29
RPL28-211ENST00000560881 PIP5KL1Q5T9C9 394 aa16.88■□□□□ 0.29
RPL28-211ENST00000560881 TIGD7Q6NT04 549 aaPredicted RBP16.88■□□□□ 0.29
RPL28-211ENST00000560881 USP30Q70CQ3 517 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms