RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 AMACRQ9UHK6 382 aa21.99■■□□□ 1.11
SNX1-206ENST00000559389 SARDHQ9UL12 918 aa21.99■■□□□ 1.11
SNX1-206ENST00000559389 H7C0C1 242 aa21.98■■□□□ 1.11
SNX1-206ENST00000559389 CES2O00748 559 aa21.98■■□□□ 1.11
SNX1-206ENST00000559389 MTSS1O43312 755 aa21.98■■□□□ 1.11
SNX1-206ENST00000559389 FGGP02679 453 aa21.98■■□□□ 1.11
SNX1-206ENST00000559389 DNTTP04053 509 aa21.98■■□□□ 1.11
SNX1-206ENST00000559389 HLA-DQB2P05538 268 aa21.98■■□□□ 1.11
SNX1-206ENST00000559389 RBP3P10745 1247 aa21.98■■□□□ 1.11
SNX1-206ENST00000559389 CR2P20023 1033 aa21.98■■□□□ 1.11
SNX1-206ENST00000559389 C5AR1P21730 350 aa21.98■■□□□ 1.11
SNX1-206ENST00000559389 ATP5OP48047 213 aa21.98■■□□□ 1.11
SNX1-206ENST00000559389 NSUN2Q08J23 767 aaKnown RBP eCLIP21.98■■□□□ 1.11
SNX1-206ENST00000559389 SIX1Q15475 284 aaPredicted RBP21.98■■□□□ 1.11
SNX1-206ENST00000559389 MYLK3Q32MK0 819 aa21.98■■□□□ 1.11
SNX1-206ENST00000559389 TTC31Q49AM3 519 aaPredicted RBP21.98■■□□□ 1.11
SNX1-206ENST00000559389 ALG1LQ6GMV1 187 aa21.98■■□□□ 1.11
SNX1-206ENST00000559389 ZBTB44Q8NCP5 570 aa21.98■■□□□ 1.11
SNX1-206ENST00000559389 TMIEQ8NEW7 156 aa21.98■■□□□ 1.11
SNX1-206ENST00000559389 SLC35B2Q8TB61 432 aa21.98■■□□□ 1.11
SNX1-206ENST00000559389 PIP4K2CQ8TBX8 421 aa21.98■■□□□ 1.11
SNX1-206ENST00000559389 LRIG1Q96JA1 1093 aa21.98■■□□□ 1.11
SNX1-206ENST00000559389 NT5MQ9NPB1 228 aa21.98■■□□□ 1.11
SNX1-206ENST00000559389 RBM22Q9NW64 420 aaKnown RBP eCLIP21.98■■□□□ 1.11
SNX1-206ENST00000559389 ZSCAN32Q9NX65 697 aa21.98■■□□□ 1.11
SNX1-206ENST00000559389 EVLQ9UI08 416 aaPredicted RBP21.98■■□□□ 1.11
SNX1-206ENST00000559389 SCML1Q9UN30 329 aa21.98■■□□□ 1.11
SNX1-206ENST00000559389 RNF103O00237 685 aa21.97■■□□□ 1.11
SNX1-206ENST00000559389 KRIT1O00522 736 aa21.97■■□□□ 1.11
SNX1-206ENST00000559389 MID1O15344 667 aa21.97■■□□□ 1.11
SNX1-206ENST00000559389 INSIG1O15503 277 aa21.97■■□□□ 1.11
SNX1-206ENST00000559389 LEFTY1O75610 366 aa21.97■■□□□ 1.11
SNX1-206ENST00000559389 POP4O95707 220 aaKnown RBP21.97■■□□□ 1.11
SNX1-206ENST00000559389 IGLV3-19P01714 112 aa21.97■■□□□ 1.11
SNX1-206ENST00000559389 TCP1P17987 556 aaKnown RBP21.97■■□□□ 1.11
SNX1-206ENST00000559389 GKP32189 559 aa21.97■■□□□ 1.11
SNX1-206ENST00000559389 SLC8A1P32418 973 aa21.97■■□□□ 1.11
SNX1-206ENST00000559389 MAPK8P45983 427 aa21.97■■□□□ 1.11
SNX1-206ENST00000559389 METAP1P53582 386 aa21.97■■□□□ 1.11
SNX1-206ENST00000559389 MAXP61244 160 aa21.97■■□□□ 1.11
SNX1-206ENST00000559389 AP1S1P61966 158 aa21.97■■□□□ 1.11
SNX1-206ENST00000559389 ETF1P62495 437 aaKnown RBP21.97■■□□□ 1.11
SNX1-206ENST00000559389 FAM46CQ5VWP2 391 aa21.97■■□□□ 1.11
SNX1-206ENST00000559389 PAPD7Q5XG87 772 aaKnown RBP21.97■■□□□ 1.11
SNX1-206ENST00000559389 NYAP1Q6ZVC0 841 aa21.97■■□□□ 1.11
SNX1-206ENST00000559389 ADAT2Q7Z6V5 191 aaKnown RBP21.97■■□□□ 1.11
SNX1-206ENST00000559389 CNTD1Q8N815 330 aa21.97■■□□□ 1.11
SNX1-206ENST00000559389 COG1Q8WTW3 980 aa21.97■■□□□ 1.11
SNX1-206ENST00000559389 NUDCD1Q96RS6 583 aa21.97■■□□□ 1.11
SNX1-206ENST00000559389 FRMD8P1Q9BZ68 369 aaPredicted RBP21.97■■□□□ 1.11
SNX1-206ENST00000559389 HAUS2Q9NVX0 235 aa21.97■■□□□ 1.11
SNX1-206ENST00000559389 SEPT10Q9P0V9 454 aa21.97■■□□□ 1.11
SNX1-206ENST00000559389 PCDHGA2Q9Y5H1 932 aa21.97■■□□□ 1.11
SNX1-206ENST00000559389 CTAGE9A4FU28 777 aa21.96■■□□□ 1.11
SNX1-206ENST00000559389 ZNF217O75362 1048 aa21.96■■□□□ 1.11
SNX1-206ENST00000559389 GJB3O75712 270 aa21.96■■□□□ 1.11
SNX1-206ENST00000559389 JCHAINP01591 159 aa21.96■■□□□ 1.11
SNX1-206ENST00000559389 ACADMP11310 421 aa21.96■■□□□ 1.11
SNX1-206ENST00000559389 PTPN3P26045 913 aa21.96■■□□□ 1.11
SNX1-206ENST00000559389 RBL1P28749 1068 aa21.96■■□□□ 1.11
SNX1-206ENST00000559389 P2RY2P41231 377 aa21.96■■□□□ 1.11
SNX1-206ENST00000559389 TPMTP51580 245 aa21.96■■□□□ 1.11
SNX1-206ENST00000559389 RAD51Q06609 339 aa21.96■■□□□ 1.11
SNX1-206ENST00000559389 WASHC5Q12768 1159 aa21.96■■□□□ 1.11
SNX1-206ENST00000559389 MAP7D1Q3KQU3 841 aa21.96■■□□□ 1.11
SNX1-206ENST00000559389 ARSIQ5FYB1 569 aa21.96■■□□□ 1.11
SNX1-206ENST00000559389 SRLQ86TD4 932 aa21.96■■□□□ 1.11
SNX1-206ENST00000559389 AADATQ8N5Z0 425 aa21.96■■□□□ 1.11
SNX1-206ENST00000559389 MAIP1Q8WWC4 291 aa21.96■■□□□ 1.11
SNX1-206ENST00000559389 HTR3CQ8WXA8 447 aa21.96■■□□□ 1.11
SNX1-206ENST00000559389 ATG4AQ8WYN0 398 aa21.96■■□□□ 1.11
SNX1-206ENST00000559389 FAM131CQ96AQ9 280 aa21.96■■□□□ 1.11
SNX1-206ENST00000559389 TUBGCP5Q96RT8 1024 aa21.96■■□□□ 1.11
SNX1-206ENST00000559389 OSBPL1AQ9BXW6 950 aa21.96■■□□□ 1.11
SNX1-206ENST00000559389 CEP41Q9BYV8 373 aa21.96■■□□□ 1.11
SNX1-206ENST00000559389 CPEB1Q9BZB8 566 aaKnown RBP21.96■■□□□ 1.11
SNX1-206ENST00000559389 POLR1EQ9GZS1 481 aaKnown RBP21.96■■□□□ 1.11
SNX1-206ENST00000559389 ITM2CQ9NQX7 267 aa21.96■■□□□ 1.11
SNX1-206ENST00000559389 TTC7AQ9ULT0 858 aaPredicted RBP21.96■■□□□ 1.11
SNX1-206ENST00000559389 ATP8A1Q9Y2Q0 1164 aa21.96■■□□□ 1.11
SNX1-206ENST00000559389 FANCMQ8IYD8 2048 aa21.96■■□□□ 1.11
SNX1-206ENST00000559389 BCLAF3A2AJT9 711 aaKnown RBP21.95■■□□□ 1.1
SNX1-206ENST00000559389 H0Y858 1186 aa21.95■■□□□ 1.1
SNX1-206ENST00000559389 KPNA3O00505 521 aaPredicted RBP21.95■■□□□ 1.1
SNX1-206ENST00000559389 LILRB5O75023 590 aa21.95■■□□□ 1.1
SNX1-206ENST00000559389 ZNF189O75820 626 aaPredicted RBP21.95■■□□□ 1.1
SNX1-206ENST00000559389 NEBLO76041 1014 aa21.95■■□□□ 1.1
SNX1-206ENST00000559389 DRD3P35462 400 aa21.95■■□□□ 1.1
SNX1-206ENST00000559389 GRM3Q14832 879 aa21.95■■□□□ 1.1
SNX1-206ENST00000559389 LONRF2Q1L5Z9 754 aa21.95■■□□□ 1.1
SNX1-206ENST00000559389 POM121L1PQ3SYA9 428 aa21.95■■□□□ 1.1
SNX1-206ENST00000559389 RALGPS1Q5JS13 557 aa21.95■■□□□ 1.1
SNX1-206ENST00000559389 USP30Q70CQ3 517 aa21.95■■□□□ 1.1
SNX1-206ENST00000559389 RLN3Q8WXF3 142 aa21.95■■□□□ 1.1
SNX1-206ENST00000559389 NKD2Q969F2 451 aaPredicted RBP21.95■■□□□ 1.1
SNX1-206ENST00000559389 ARRDC3Q96B67 414 aa21.95■■□□□ 1.1
SNX1-206ENST00000559389 C10orf88Q9H8K7 445 aa21.95■■□□□ 1.1
SNX1-206ENST00000559389 SERGEFQ9UGK8 458 aa21.95■■□□□ 1.1
SNX1-206ENST00000559389 IGHV1OR15-9A0A0B4J2B8 117 aa21.94■■□□□ 1.1
SNX1-206ENST00000559389 A0A1W2PP55 124 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms