RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 RAB41Q5JT25 222 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 C1orf141Q5JVX7 400 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 SPDYAQ5MJ70 313 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 AKNAD1Q5T1N1 836 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 TSTD2Q5T7W7 516 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 CES5AQ6NT32 575 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 CPLX2Q6PUV4 134 aaKnown RBP2.42□□□□□ -2.02
GABPB1-209ENST00000559100 CYB5R4Q7L1T6 521 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 GALNTL5Q7Z4T8 443 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 MDGA2Q7Z553 956 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 BCDIN3DQ7Z5W3 292 aaKnown RBP2.42□□□□□ -2.02
GABPB1-209ENST00000559100 NEK8Q86SG6 692 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 RHPN2Q8IUC4 686 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 GALNT13Q8IUC8 556 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 ARHGAP12Q8IWW6 846 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 KIAA2013Q8IYS2 634 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 TMEM217Q8N7C4 229 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 AMER2Q8N7J2 671 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 FAM47BQ8NA70 645 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 ZBTB8BQ8NAP8 495 aaPredicted RBP2.42□□□□□ -2.02
GABPB1-209ENST00000559100 AVL9Q8NBF6 648 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 ZNF653Q96CK0 615 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 ZNF419Q96HQ0 510 aaPredicted RBP2.42□□□□□ -2.02
GABPB1-209ENST00000559100 TTC14Q96N46 770 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 ZNF347Q96SE7 839 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 SIN3AQ96ST3 1273 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 IFIH1Q9BYX4 1025 aaKnown RBP2.42□□□□□ -2.02
GABPB1-209ENST00000559100 CXorf56Q9H5V9 222 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 KIF9Q9HAQ2 790 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 SCPEP1Q9HB40 452 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 Q9N2J8 555 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 SLC6A13Q9NSD5 602 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 SMPD4Q9NXE4 827 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 SUCLA2Q9P2R7 463 aaPredicted RBP2.42□□□□□ -2.02
GABPB1-209ENST00000559100 MORF4L1Q9UBU8 362 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 ANAPC5Q9UJX4 755 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 NENFQ9UMX5 172 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 A4GNTQ9UNA3 340 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 ICKQ9UPZ9 632 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 PTRH2Q9Y3E5 179 aaKnown RBP2.42□□□□□ -2.02
GABPB1-209ENST00000559100 ADAM18Q9Y3Q7 739 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 SPATA31A1Q5TZJ5 1347 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 hCG_1809904A0A1W2PP81 198 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 A0A1W2PPE2 198 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 A0A1W2PQM1 296 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 A0A1W2PR64 198 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 C17orf100A8MU93 164 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 BTBD19C9JJ37 291 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 USP17L23D6RBM5 183 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 H3BQ06 376 aaPredicted RBP2.41□□□□□ -2.02
GABPB1-209ENST00000559100 SH2B2O14492 632 aaPredicted RBP2.41□□□□□ -2.02
GABPB1-209ENST00000559100 PAGE4O60829 102 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 DIAPH2O60879 1101 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 ATP2C2O75185 946 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 ENTPD3O75355 529 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 SLC25A12O75746 678 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 TPPPO94811 219 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 PGM3O95394 542 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 HNRNPCP07910 306 aaKnown RBP eCLIP2.41□□□□□ -2.02
GABPB1-209ENST00000559100 ELFN1P0C7U0 828 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 PRR35P0CG20 571 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 NR2F1P10589 423 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 PCNAP12004 261 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 GLULP15104 373 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 ST6GAL1P15907 406 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 EDN2P20800 178 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 IL11P20809 199 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 DRD4P21917 467 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 YWHAQP27348 245 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 TACR3P29371 465 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 CIITAP33076 1130 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 PIP4K2AP48426 406 aaPredicted RBP2.41□□□□□ -2.02
GABPB1-209ENST00000559100 LIG4P49917 911 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 ZNF84P51523 738 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 STAT2P52630 851 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 EFNA5P52803 228 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 DGCR2P98153 550 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 HOXA4Q00056 320 aaPredicted RBP2.41□□□□□ -2.02
GABPB1-209ENST00000559100 ROR1Q01973 937 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 PPARDQ03181 441 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 NIPAL4Q0D2K0 466 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 IKQ13123 557 aaPredicted RBP2.41□□□□□ -2.02
GABPB1-209ENST00000559100 AIMP2Q13155 320 aaKnown RBP2.41□□□□□ -2.02
GABPB1-209ENST00000559100 ITGADQ13349 1161 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 CAMK2DQ13557 499 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 TUBA3CQ13748 450 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 FGFBP1Q14512 234 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 IRF3Q14653 427 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 PUM1Q14671 1186 aaKnown RBP eCLIP2.41□□□□□ -2.02
GABPB1-209ENST00000559100 DRAP1Q14919 205 aaPredicted RBP2.41□□□□□ -2.02
GABPB1-209ENST00000559100 NAB2Q15742 525 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 ME3Q16798 604 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 ZXDCQ2QGD7 858 aaPredicted RBP2.41□□□□□ -2.02
GABPB1-209ENST00000559100 IGSF11Q5DX21 431 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 HECTD3Q5T447 861 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 RPUSD3Q6P087 351 aaKnown RBP2.41□□□□□ -2.02
GABPB1-209ENST00000559100 CEP85Q6P2H3 762 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 TUBA3EQ6PEY2 450 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 LRIG3Q6UXM1 1119 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 RNF207Q6ZRF8 634 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms