RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 POP4O95707 220 aaKnown RBP16.16■□□□□ 0.18
TUBB3-213ENST00000557262 GIMD1P0DJR0 217 aa16.16■□□□□ 0.18
TUBB3-213ENST00000557262 RFC1P35251 1148 aaPredicted RBP16.16■□□□□ 0.18
TUBB3-213ENST00000557262 NSFP46459 744 aaKnown RBP16.16■□□□□ 0.18
TUBB3-213ENST00000557262 HDAC4P56524 1084 aa16.16■□□□□ 0.18
TUBB3-213ENST00000557262 SNRPD1P62314 119 aaKnown RBP16.16■□□□□ 0.18
TUBB3-213ENST00000557262 INSM1Q01101 510 aaPredicted RBP16.16■□□□□ 0.18
TUBB3-213ENST00000557262 SEMG2Q02383 582 aa16.16■□□□□ 0.18
TUBB3-213ENST00000557262 FGL2Q14314 439 aa16.16■□□□□ 0.18
TUBB3-213ENST00000557262 POLD3Q15054 466 aaPredicted RBP16.16■□□□□ 0.18
TUBB3-213ENST00000557262 ZNF805Q5CZA5 627 aa16.16■□□□□ 0.18
TUBB3-213ENST00000557262 WDR59Q6PJI9 974 aa16.16■□□□□ 0.18
TUBB3-213ENST00000557262 PARS2Q7L3T8 475 aaKnown RBP16.16■□□□□ 0.18
TUBB3-213ENST00000557262 PHF13Q86YI8 300 aaPredicted RBP16.16■□□□□ 0.18
TUBB3-213ENST00000557262 SLC22A18ASQ8N1D0 253 aa16.16■□□□□ 0.18
TUBB3-213ENST00000557262 FAM172AQ8WUF8 416 aa16.16■□□□□ 0.18
TUBB3-213ENST00000557262 NTAN1Q96AB6 310 aa16.16■□□□□ 0.18
TUBB3-213ENST00000557262 TBC1D31Q96DN5 1066 aa16.16■□□□□ 0.18
TUBB3-213ENST00000557262 PCMTD1Q96MG8 357 aaPredicted RBP16.16■□□□□ 0.18
TUBB3-213ENST00000557262 LENG8Q96PV6 779 aaPredicted RBP16.16■□□□□ 0.18
TUBB3-213ENST00000557262 SELENOOQ9BVL4 669 aa16.16■□□□□ 0.18
TUBB3-213ENST00000557262 C1QTNF2Q9BXJ5 285 aa16.16■□□□□ 0.18
TUBB3-213ENST00000557262 CLCA2Q9UQC9 943 aa16.16■□□□□ 0.18
TUBB3-213ENST00000557262 POM121BA6NF01 834 aa16.15■□□□□ 0.18
TUBB3-213ENST00000557262 SIGLEC16A6NMB1 481 aa16.15■□□□□ 0.18
TUBB3-213ENST00000557262 RAD51BO15315 384 aa16.15■□□□□ 0.18
TUBB3-213ENST00000557262 FFAR2O15552 330 aa16.15■□□□□ 0.18
TUBB3-213ENST00000557262 KDELR3O43731 214 aa16.15■□□□□ 0.18
TUBB3-213ENST00000557262 RAMP2O60895 175 aa16.15■□□□□ 0.18
TUBB3-213ENST00000557262 GSRP00390 522 aa16.15■□□□□ 0.18
TUBB3-213ENST00000557262 CALB1P05937 261 aa16.15■□□□□ 0.18
TUBB3-213ENST00000557262 ALPPL2P10696 532 aa16.15■□□□□ 0.18
TUBB3-213ENST00000557262 GPD1P21695 349 aa16.15■□□□□ 0.18
TUBB3-213ENST00000557262 COPB1P53618 953 aaKnown RBP16.15■□□□□ 0.18
TUBB3-213ENST00000557262 GSCP56915 257 aaPredicted RBP16.15■□□□□ 0.18
TUBB3-213ENST00000557262 HNRNPKP61978 463 aaKnown RBP eCLIP16.15■□□□□ 0.18
TUBB3-213ENST00000557262 SYCP1Q15431 976 aa16.15■□□□□ 0.18
TUBB3-213ENST00000557262 CLEC16AQ2KHT3 1053 aa16.15■□□□□ 0.18
TUBB3-213ENST00000557262 MYLK3Q32MK0 819 aa16.15■□□□□ 0.18
TUBB3-213ENST00000557262 SOWAHCQ53LP3 525 aaPredicted RBP16.15■□□□□ 0.18
TUBB3-213ENST00000557262 ZNF542PQ5EBM4 170 aa16.15■□□□□ 0.18
TUBB3-213ENST00000557262 KYAT3Q6YP21 454 aaKnown RBP16.15■□□□□ 0.18
TUBB3-213ENST00000557262 RBM43Q6ZSC3 357 aaKnown RBP16.15■□□□□ 0.18
TUBB3-213ENST00000557262 TMC6Q7Z403 805 aa16.15■□□□□ 0.18
TUBB3-213ENST00000557262 PTAR1Q7Z6K3 402 aaPredicted RBP16.15■□□□□ 0.18
TUBB3-213ENST00000557262 SLFN11Q7Z7L1 901 aa16.15■□□□□ 0.18
TUBB3-213ENST00000557262 CCDC185Q8N715 623 aa16.15■□□□□ 0.18
TUBB3-213ENST00000557262 DCBLD1Q8N8Z6 715 aa16.15■□□□□ 0.18
TUBB3-213ENST00000557262 ANKRD20A12PQ8NF67 263 aa16.15■□□□□ 0.18
TUBB3-213ENST00000557262 NEK11Q8NG66 645 aa16.15■□□□□ 0.18
TUBB3-213ENST00000557262 OR2AP1Q8NGE2 309 aa16.15■□□□□ 0.18
TUBB3-213ENST00000557262 ASB12Q8WXK4 309 aa16.15■□□□□ 0.18
TUBB3-213ENST00000557262 DCBLD2Q96PD2 775 aa16.15■□□□□ 0.18
TUBB3-213ENST00000557262 GPR27Q9NS67 375 aa16.15■□□□□ 0.18
TUBB3-213ENST00000557262 DNAJC28Q9NX36 388 aa16.15■□□□□ 0.18
TUBB3-213ENST00000557262 NLGN3Q9NZ94 848 aa16.15■□□□□ 0.18
TUBB3-213ENST00000557262 IPO11Q9UI26 975 aaKnown RBP16.15■□□□□ 0.18
TUBB3-213ENST00000557262 TRPM6Q9BX84 2022 aa16.14■□□□□ 0.17
TUBB3-213ENST00000557262 BAHCC1Q9P281 2608 aa16.14■□□□□ 0.17
TUBB3-213ENST00000557262 SPTY2D1-AS1A0A0U1RR47 76 aa16.14■□□□□ 0.17
TUBB3-213ENST00000557262 IGLON5A6NGN9 336 aa16.14■□□□□ 0.17
TUBB3-213ENST00000557262 LRRC10BA6NIK2 292 aa16.14■□□□□ 0.17
TUBB3-213ENST00000557262 KRIT1O00522 736 aa16.14■□□□□ 0.17
TUBB3-213ENST00000557262 NEMP1O14524 444 aa16.14■□□□□ 0.17
TUBB3-213ENST00000557262 FPGTO14772 594 aa16.14■□□□□ 0.17
TUBB3-213ENST00000557262 SCAMP1O15126 338 aa16.14■□□□□ 0.17
TUBB3-213ENST00000557262 MT-CO3P00414 261 aa16.14■□□□□ 0.17
TUBB3-213ENST00000557262 CKMT1AP12532 417 aa16.14■□□□□ 0.17
TUBB3-213ENST00000557262 GKP32189 559 aa16.14■□□□□ 0.17
TUBB3-213ENST00000557262 RABIFP47224 123 aa16.14■□□□□ 0.17
TUBB3-213ENST00000557262 FZD2Q14332 565 aa16.14■□□□□ 0.17
TUBB3-213ENST00000557262 LEKR1Q6ZMV7 388 aa16.14■□□□□ 0.17
TUBB3-213ENST00000557262 FAM181AQ8N9Y4 354 aa16.14■□□□□ 0.17
TUBB3-213ENST00000557262 C3orf20Q8ND61 904 aa16.14■□□□□ 0.17
TUBB3-213ENST00000557262 OR6K2Q8NGY2 324 aa16.14■□□□□ 0.17
TUBB3-213ENST00000557262 APOLD1Q96LR9 279 aa16.14■□□□□ 0.17
TUBB3-213ENST00000557262 KLF6Q99612 283 aaPredicted RBP16.14■□□□□ 0.17
TUBB3-213ENST00000557262 DUSP23Q9BVJ7 150 aa16.14■□□□□ 0.17
TUBB3-213ENST00000557262 OSBPL1AQ9BXW6 950 aa16.14■□□□□ 0.17
TUBB3-213ENST00000557262 LIMA1Q9UHB6 759 aaKnown RBP16.14■□□□□ 0.17
TUBB3-213ENST00000557262 NEU3Q9UQ49 428 aa16.14■□□□□ 0.17
TUBB3-213ENST00000557262 ZSCAN5CA6NGD5 496 aaPredicted RBP16.13■□□□□ 0.17
TUBB3-213ENST00000557262 BUB1O43683 1085 aa16.13■□□□□ 0.17
TUBB3-213ENST00000557262 TLX3O43711 291 aaPredicted RBP16.13■□□□□ 0.17
TUBB3-213ENST00000557262 CSF2P04141 144 aa16.13■□□□□ 0.17
TUBB3-213ENST00000557262 CDK11BP21127 795 aaKnown RBP16.13■□□□□ 0.17
TUBB3-213ENST00000557262 EIF2S3P41091 472 aaKnown RBP16.13■□□□□ 0.17
TUBB3-213ENST00000557262 ABL2P42684 1182 aa16.13■□□□□ 0.17
TUBB3-213ENST00000557262 ABCG1P45844 678 aa16.13■□□□□ 0.17
TUBB3-213ENST00000557262 DUSP3P51452 185 aaPredicted RBP16.13■□□□□ 0.17
TUBB3-213ENST00000557262 UBXN1Q04323 297 aa16.13■□□□□ 0.17
TUBB3-213ENST00000557262 RAD51Q06609 339 aa16.13■□□□□ 0.17
TUBB3-213ENST00000557262 SCYL2Q6P3W7 929 aa16.13■□□□□ 0.17
TUBB3-213ENST00000557262 SASS6Q6UVJ0 657 aa16.13■□□□□ 0.17
TUBB3-213ENST00000557262 LRRC69Q6ZNQ3 347 aa16.13■□□□□ 0.17
TUBB3-213ENST00000557262 TTC7BQ86TV6 843 aa16.13■□□□□ 0.17
TUBB3-213ENST00000557262 ZNF354CQ86Y25 554 aa16.13■□□□□ 0.17
TUBB3-213ENST00000557262 CASKIN2Q8WXE0 1202 aa16.13■□□□□ 0.17
TUBB3-213ENST00000557262 VOPP1Q96AW1 172 aa16.13■□□□□ 0.17
TUBB3-213ENST00000557262 ARHGEF26Q96DR7 871 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms