RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 BLKP51451 505 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 PGDP52209 483 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 KIF11P52732 1056 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 ZNF131P52739 623 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 SGCGQ13326 291 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 TOB2Q14106 344 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-245ENST00000556958 PDE1CQ14123 709 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-245ENST00000556958 ARHGEF7Q14155 803 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 ZRSR2Q15696 482 aaKnown RBP5.89□□□□□ -1.47
ATXN3-245ENST00000556958 CLPPQ16740 277 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-245ENST00000556958 ARSHQ5FYA8 562 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 EFHC2Q5JST6 749 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 DCAF12Q5T6F0 453 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 FAXCQ5TGI0 409 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 AGBL4Q5VU57 503 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 SCARA3Q6AZY7 606 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 OR6B2Q6IFH4 312 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 RUFY3Q7L099 469 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 CCDC186Q7Z3E2 898 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 SCD5Q86SK9 330 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 ZSCAN30Q86W11 494 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 SLITRK4Q8IW52 837 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 FUKQ8N0W3 1084 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 Q8N9G6 341 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-245ENST00000556958 AGBL5Q8NDL9 886 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 ZMIZ2Q8NF64 920 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 SAAL1Q96ER3 474 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 FEM1CQ96JP0 617 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 TEFMQ96QE5 360 aaKnown RBP5.89□□□□□ -1.47
ATXN3-245ENST00000556958 REEP2Q9BRK0 252 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 CHST11Q9NPF2 352 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 FZD3Q9NPG1 666 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 DYRK4Q9NR20 520 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 GPR27Q9NS67 375 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 SLC39A1Q9NY26 324 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 RRN3Q9NYV6 651 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 KLF15Q9UIH9 416 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 GDF2Q9UK05 429 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-245ENST00000556958 APPL1Q9UKG1 709 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 GPR34Q9UPC5 381 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 NAALADL1Q9UQQ1 740 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 DAAM1Q9Y4D1 1078 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 B3GALT1Q9Y5Z6 326 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 CYP46A1Q9Y6A2 500 aa5.89□□□□□ -1.47
ATXN3-245ENST00000556958 HIVEP3Q5T1R4 2406 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 LRRK1Q38SD2 2015 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 LOC101059948A0A1B0GTJ6 334 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 FAM221AA4D161 298 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 POM121BA6NF01 834 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 ZNF233A6NK53 670 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 KIAA0391O15091 583 aaKnown RBP5.88□□□□□ -1.47
ATXN3-245ENST00000556958 ALOX15BO15296 676 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 STX6O43752 255 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 DPM1O60762 260 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 BEST1O76090 585 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 PAK4O96013 591 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-245ENST00000556958 CST3P01034 146 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-245ENST00000556958 FGF3P11487 239 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-245ENST00000556958 CTSEP14091 401 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 IDEP14735 1019 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 COX6B1P14854 86 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 GLB1P16278 677 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 TSHRP16473 764 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 SSTR2P30874 369 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 ATICP31939 592 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 CSTF2P33240 577 aaKnown RBP eCLIP5.88□□□□□ -1.47
ATXN3-245ENST00000556958 SLC11A2P49281 568 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 THOP1P52888 689 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 PMS2P54278 862 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 RPS21P63220 83 aaKnown RBP5.88□□□□□ -1.47
ATXN3-245ENST00000556958 PPARDQ03181 441 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 SULT2A1Q06520 285 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 TRPC3Q13507 836 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 ART3Q13508 389 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 TRA2AQ13595 282 aaKnown RBP eCLIP5.88□□□□□ -1.47
ATXN3-245ENST00000556958 ESPL1Q14674 2120 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 C16orf72Q14CZ0 275 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 NADK2Q4G0N4 442 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 TTC38Q5R3I4 469 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 HYIQ5T013 277 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 PIK3R6Q5UE93 754 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 DTHD1Q6ZMT9 781 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 CAPN12Q6ZSI9 719 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 ZNF720Q7Z2F6 126 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 TRAPPC11Q7Z392 1133 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 GKN2Q86XP6 184 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 HPS6Q86YV9 775 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 APLFQ8IW19 511 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-245ENST00000556958 PHACTR4Q8IZ21 702 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 C4orf32Q8N8J7 132 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 OR5B17Q8NGF7 314 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 SLC2A14Q8TDB8 520 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 NOC3LQ8WTT2 800 aaKnown RBP5.88□□□□□ -1.47
ATXN3-245ENST00000556958 ZDHHC1Q8WTX9 485 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 ART4Q93070 314 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 RNF34Q969K3 372 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 SYAP1Q96A49 352 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-245ENST00000556958 ACCSQ96QU6 501 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 DDX50Q9BQ39 737 aaKnown RBP5.88□□□□□ -1.47
ATXN3-245ENST00000556958 ZPBPQ9BS86 351 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms