RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 ZSCAN32Q9NX65 697 aa16.69■□□□□ 0.26
PCNX4-213ENST00000556907 FEZ2Q9UHY8 353 aaPredicted RBP16.69■□□□□ 0.26
PCNX4-213ENST00000556907 ARIH1Q9Y4X5 557 aaPredicted RBP16.69■□□□□ 0.26
PCNX4-213ENST00000556907 PCDHGA2Q9Y5H1 932 aa16.69■□□□□ 0.26
PCNX4-213ENST00000556907 UQCRHLA0A096LP55 91 aa16.68■□□□□ 0.26
PCNX4-213ENST00000556907 BCLAF3A2AJT9 711 aaKnown RBP16.68■□□□□ 0.26
PCNX4-213ENST00000556907 ZNF217O75362 1048 aa16.68■□□□□ 0.26
PCNX4-213ENST00000556907 HEXIM1O94992 359 aaKnown RBP16.68■□□□□ 0.26
PCNX4-213ENST00000556907 CD160O95971 181 aa16.68■□□□□ 0.26
PCNX4-213ENST00000556907 UQCRHP07919 91 aa16.68■□□□□ 0.26
PCNX4-213ENST00000556907 RHOXF2BP0C7M4 288 aa16.68■□□□□ 0.26
PCNX4-213ENST00000556907 SP9P0CG40 484 aa16.68■□□□□ 0.26
PCNX4-213ENST00000556907 HLA-EP13747 358 aa16.68■□□□□ 0.26
PCNX4-213ENST00000556907 COL9A1P20849 921 aa16.68■□□□□ 0.26
PCNX4-213ENST00000556907 CCNCP24863 283 aa16.68■□□□□ 0.26
PCNX4-213ENST00000556907 GARSP41250 739 aaKnown RBP16.68■□□□□ 0.26
PCNX4-213ENST00000556907 KCNJ1P48048 391 aa16.68■□□□□ 0.26
PCNX4-213ENST00000556907 PDK1Q15118 436 aa16.68■□□□□ 0.26
PCNX4-213ENST00000556907 PRKD1Q15139 912 aaPredicted RBP16.68■□□□□ 0.26
PCNX4-213ENST00000556907 ELF2Q15723 593 aa16.68■□□□□ 0.26
PCNX4-213ENST00000556907 SLC45A4Q5BKX6 768 aa16.68■□□□□ 0.26
PCNX4-213ENST00000556907 C22orf39Q6P5X5 142 aa16.68■□□□□ 0.26
PCNX4-213ENST00000556907 ZC3H14Q6PJT7 736 aaKnown RBP16.68■□□□□ 0.26
PCNX4-213ENST00000556907 LINGO4Q6UY18 593 aa16.68■□□□□ 0.26
PCNX4-213ENST00000556907 TMPRSS6Q8IU80 811 aa16.68■□□□□ 0.26
PCNX4-213ENST00000556907 GPR161Q8N6U8 529 aaKnown RBP16.68■□□□□ 0.26
PCNX4-213ENST00000556907 OR8D1Q8WZ84 308 aa16.68■□□□□ 0.26
PCNX4-213ENST00000556907 PRCCQ92733 491 aaPredicted RBP16.68■□□□□ 0.26
PCNX4-213ENST00000556907 RTP4Q96DX8 246 aa16.68■□□□□ 0.26
PCNX4-213ENST00000556907 HHIPQ96QV1 700 aa16.68■□□□□ 0.26
PCNX4-213ENST00000556907 RHOXF2Q9BQY4 288 aa16.68■□□□□ 0.26
PCNX4-213ENST00000556907 RAB17Q9H0T7 212 aa16.68■□□□□ 0.26
PCNX4-213ENST00000556907 RSPH9Q9H1X1 276 aaPredicted RBP16.68■□□□□ 0.26
PCNX4-213ENST00000556907 BCCIPQ9P287 314 aaKnown RBP eCLIP16.68■□□□□ 0.26
PCNX4-213ENST00000556907 NEU2Q9Y3R4 380 aa16.68■□□□□ 0.26
PCNX4-213ENST00000556907 H7C0C1 242 aa16.67■□□□□ 0.26
PCNX4-213ENST00000556907 AXIN1O15169 862 aa16.67■□□□□ 0.26
PCNX4-213ENST00000556907 MAFKO60675 156 aa16.67■□□□□ 0.26
PCNX4-213ENST00000556907 SIN3BO75182 1162 aa16.67■□□□□ 0.26
PCNX4-213ENST00000556907 GSRP00390 522 aa16.67■□□□□ 0.26
PCNX4-213ENST00000556907 GABRG2P18507 467 aa16.67■□□□□ 0.26
PCNX4-213ENST00000556907 HSPA9P38646 679 aaKnown RBP16.67■□□□□ 0.26
PCNX4-213ENST00000556907 ATP5OP48047 213 aa16.67■□□□□ 0.26
PCNX4-213ENST00000556907 RENBPP51606 427 aa16.67■□□□□ 0.26
PCNX4-213ENST00000556907 COPAP53621 1224 aa16.67■□□□□ 0.26
PCNX4-213ENST00000556907 SNRPD1P62314 119 aaKnown RBP16.67■□□□□ 0.26
PCNX4-213ENST00000556907 CARD16Q5EG05 197 aa16.67■□□□□ 0.26
PCNX4-213ENST00000556907 FAM46CQ5VWP2 391 aa16.67■□□□□ 0.26
PCNX4-213ENST00000556907 ZNF776Q68DI1 518 aaPredicted RBP16.67■□□□□ 0.26
PCNX4-213ENST00000556907 ANO7Q6IWH7 933 aa16.67■□□□□ 0.26
PCNX4-213ENST00000556907 C11orf74Q86VG3 221 aa16.67■□□□□ 0.26
PCNX4-213ENST00000556907 ZC3H18Q86VM9 953 aaKnown RBP16.67■□□□□ 0.26
PCNX4-213ENST00000556907 PGBD3Q8N328 593 aa16.67■□□□□ 0.26
PCNX4-213ENST00000556907 ZBTB44Q8NCP5 570 aa16.67■□□□□ 0.26
PCNX4-213ENST00000556907 SEC14L1Q92503 715 aa16.67■□□□□ 0.26
PCNX4-213ENST00000556907 SIPA1Q96FS4 1042 aa16.67■□□□□ 0.26
PCNX4-213ENST00000556907 LRIG1Q96JA1 1093 aa16.67■□□□□ 0.26
PCNX4-213ENST00000556907 MRGPRX1Q96LB2 322 aa16.67■□□□□ 0.26
PCNX4-213ENST00000556907 TRIM51Q9BSJ1 452 aa16.67■□□□□ 0.26
PCNX4-213ENST00000556907 PCDH9Q9HC56 1237 aa16.67■□□□□ 0.26
PCNX4-213ENST00000556907 ZNF148Q9UQR1 794 aa16.67■□□□□ 0.26
PCNX4-213ENST00000556907 J3KR12 359 aa16.66■□□□□ 0.26
PCNX4-213ENST00000556907 K7ERQ8 282 aa16.66■□□□□ 0.26
PCNX4-213ENST00000556907 SMAD6O43541 496 aaKnown RBP16.66■□□□□ 0.26
PCNX4-213ENST00000556907 TMCC1O94876 653 aa16.66■□□□□ 0.26
PCNX4-213ENST00000556907 MAP3K6O95382 1288 aa16.66■□□□□ 0.26
PCNX4-213ENST00000556907 PRNPP04156 253 aa16.66■□□□□ 0.26
PCNX4-213ENST00000556907 TNFRSF8P28908 595 aa16.66■□□□□ 0.26
PCNX4-213ENST00000556907 RAD51Q06609 339 aa16.66■□□□□ 0.26
PCNX4-213ENST00000556907 PPIDQ08752 370 aaKnown RBP16.66■□□□□ 0.26
PCNX4-213ENST00000556907 NSUN2Q08J23 767 aaKnown RBP eCLIP16.66■□□□□ 0.26
PCNX4-213ENST00000556907 HNRNPDQ14103 355 aaKnown RBP16.66■□□□□ 0.26
PCNX4-213ENST00000556907 GRM3Q14832 879 aa16.66■□□□□ 0.26
PCNX4-213ENST00000556907 USP39Q53GS9 565 aaKnown RBP16.66■□□□□ 0.26
PCNX4-213ENST00000556907 DARS2Q6PI48 645 aaKnown RBP16.66■□□□□ 0.26
PCNX4-213ENST00000556907 TSSK4Q6SA08 328 aa16.66■□□□□ 0.26
PCNX4-213ENST00000556907 ZNF366Q8N895 744 aa16.66■□□□□ 0.26
PCNX4-213ENST00000556907 TMIEQ8NEW7 156 aa16.66■□□□□ 0.26
PCNX4-213ENST00000556907 MDGA1Q8NFP4 955 aa16.66■□□□□ 0.26
PCNX4-213ENST00000556907 OR2AP1Q8NGE2 309 aa16.66■□□□□ 0.26
PCNX4-213ENST00000556907 OR2A12Q8NGT7 310 aa16.66■□□□□ 0.26
PCNX4-213ENST00000556907 CCHCR1Q8TD31 782 aa16.66■□□□□ 0.26
PCNX4-213ENST00000556907 TFB1MQ8WVM0 346 aaKnown RBP16.66■□□□□ 0.26
PCNX4-213ENST00000556907 HMGB4Q8WW32 186 aa16.66■□□□□ 0.26
PCNX4-213ENST00000556907 FAM129BQ96TA1 746 aa16.66■□□□□ 0.26
PCNX4-213ENST00000556907 TMEM121Q9BTD3 319 aa16.66■□□□□ 0.26
PCNX4-213ENST00000556907 POLR3BQ9NW08 1133 aaPredicted RBP16.66■□□□□ 0.26
PCNX4-213ENST00000556907 SEPT3Q9UH03 358 aa16.66■□□□□ 0.26
PCNX4-213ENST00000556907 DMGDHQ9UI17 866 aaKnown RBP16.66■□□□□ 0.26
PCNX4-213ENST00000556907 C1QTNF3-AMACRE9PGA6 284 aa16.65■□□□□ 0.26
PCNX4-213ENST00000556907 MATN3O15232 486 aa16.65■□□□□ 0.26
PCNX4-213ENST00000556907 ZNF821O75541 412 aaPredicted RBP16.65■□□□□ 0.26
PCNX4-213ENST00000556907 POP4O95707 220 aaKnown RBP16.65■□□□□ 0.26
PCNX4-213ENST00000556907 IGSF6O95976 241 aa16.65■□□□□ 0.26
PCNX4-213ENST00000556907 ADH1BP00325 375 aa16.65■□□□□ 0.26
PCNX4-213ENST00000556907 DNTTP04053 509 aa16.65■□□□□ 0.26
PCNX4-213ENST00000556907 ACADMP11310 421 aa16.65■□□□□ 0.26
PCNX4-213ENST00000556907 VAV1P15498 845 aa16.65■□□□□ 0.26
PCNX4-213ENST00000556907 NDUFV2P19404 249 aa16.65■□□□□ 0.26
PCNX4-213ENST00000556907 OXTRP30559 389 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms