RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 FAM71BQ8TC56 605 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 STAMQ92783 540 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 P2RX5Q93086 422 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 CNDP2Q96KP4 475 aaKnown RBP5.39□□□□□ -1.55
SRP54-211ENST00000556445 ZNF830Q96NB3 372 aaPredicted RBP5.39□□□□□ -1.55
SRP54-211ENST00000556445 PANX2Q96RD6 677 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 AGAP2Q99490 1192 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 RIT2Q99578 217 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 TTPALQ9BTX7 342 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 MMTAG2Q9BU76 263 aaKnown RBP5.39□□□□□ -1.55
SRP54-211ENST00000556445 MRI1Q9BV20 369 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 NUP58Q9BVL2 599 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 EDEM3Q9BZQ6 932 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 OR10A4Q9H209 315 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 HSD3B7Q9H2F3 369 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 SAMSN1Q9NSI8 373 aaKnown RBP5.39□□□□□ -1.55
SRP54-211ENST00000556445 PIH1D1Q9NWS0 290 aaKnown RBP5.39□□□□□ -1.55
SRP54-211ENST00000556445 KCND2Q9NZV8 630 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 CCPG1Q9ULG6 757 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 ARHGAP26Q9UNA1 814 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 RRP15Q9Y3B9 282 aaKnown RBP5.39□□□□□ -1.55
SRP54-211ENST00000556445 PAXBP1Q9Y5B6 917 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 SNX8Q9Y5X2 465 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 ZFP37Q9Y6Q3 630 aaPredicted RBP5.39□□□□□ -1.55
SRP54-211ENST00000556445 GRID2IPA4D2P6 1211 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 MYMKA6NI61 221 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 H0Y626 953 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 ATP2A1O14983 1001 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 EDIL3O43854 480 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 STAM2O75886 525 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 FLOT1O75955 427 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 GOSR1O95249 250 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 PGM3O95394 542 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 FTLP02792 175 aaPredicted RBP5.38□□□□□ -1.55
SRP54-211ENST00000556445 PLA2G4BP0C869 781 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 THEGLP0DJG4 465 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 GAP43P17677 238 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 PCSK1P29120 753 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 CASP1P29466 404 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 ATP5DP30049 168 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 MAPK4P31152 587 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 COPB1P53618 953 aaKnown RBP5.38□□□□□ -1.55
SRP54-211ENST00000556445 TPD52P55327 224 aaPredicted RBP5.38□□□□□ -1.55
SRP54-211ENST00000556445 BACE1P56817 501 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 STX17P56962 302 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 RAP2BP61225 183 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 HTRA4P83105 476 aaPredicted RBP5.38□□□□□ -1.55
SRP54-211ENST00000556445 CCZ1BP86790 482 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 CCZ1P86791 482 aaPredicted RBP5.38□□□□□ -1.55
SRP54-211ENST00000556445 DSC2Q02487 901 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 COL10A1Q03692 680 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 ACVR2BQ13705 512 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 FGL2Q14314 439 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 KRT31Q15323 416 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 SHROOM1Q2M3G4 852 aaPredicted RBP5.38□□□□□ -1.55
SRP54-211ENST00000556445 MMEL1Q495T6 779 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 SETMARQ53H47 684 aaPredicted RBP5.38□□□□□ -1.55
SRP54-211ENST00000556445 KRTCAP3Q53RY4 240 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 CRB2Q5IJ48 1285 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 LRCH2Q5VUJ6 765 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 LAIR1Q6GTX8 287 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 NCAPH2Q6IBW4 605 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 CENPPQ6IPU0 288 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 CSGALNACT2Q8N6G5 542 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 ZNF397Q8NF99 534 aaPredicted RBP5.38□□□□□ -1.55
SRP54-211ENST00000556445 CYP2W1Q8TAV3 490 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 STYXQ8WUJ0 223 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 CASKIN2Q8WXE0 1202 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 RGMAQ96B86 450 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 DCPSQ96C86 337 aaKnown RBP5.38□□□□□ -1.55
SRP54-211ENST00000556445 PLIN2Q99541 437 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 MXRA8Q9BRK3 442 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 TEKT3Q9BXF9 490 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 PRDM13Q9H4Q3 707 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 SLC38A10Q9HBR0 1119 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 CCDC177Q9NQR7 707 aaPredicted RBP5.38□□□□□ -1.55
SRP54-211ENST00000556445 ADARB2Q9NS39 739 aaKnown RBP5.38□□□□□ -1.55
SRP54-211ENST00000556445 TM7SF3Q9NS93 570 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 PANK4Q9NVE7 773 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 HOXC10Q9NYD6 342 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 MOCS1Q9NZB8 636 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 FAM30AQ9NZY2 134 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 SLC23A1Q9UHI7 598 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 AJAP1Q9UKB5 411 aaPredicted RBP5.38□□□□□ -1.55
SRP54-211ENST00000556445 PYCARDQ9ULZ3 195 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 GDAQ9Y2T3 454 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 USP15Q9Y4E8 981 aaPredicted RBP5.38□□□□□ -1.55
SRP54-211ENST00000556445 DMRT1Q9Y5R6 373 aa5.38□□□□□ -1.55
SRP54-211ENST00000556445 SBF1O95248 1867 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 hCG_1807616A0A1W2PRN6 198 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 FAM234BA2RU67 622 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 TMEM191CA6NGB0 347 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 FAM171A2A8MVW0 826 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 FAM86B1E9PN63 330 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 PLOD2O00469 737 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 MSH4O15457 936 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 TBCAO75347 108 aaKnown RBP5.37□□□□□ -1.55
SRP54-211ENST00000556445 PSMD10O75832 226 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 NDUFA10O95299 355 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 MLYCDO95822 493 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms