RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, human

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-223	ENST00000555904	WASH3P	C4AMC7	463 aa		12.69	□□□□□ -0.38
ABCD4-223	ENST00000555904		E7EVH7	732 aa		12.69	□□□□□ -0.38
ABCD4-223	ENST00000555904	TNFRSF10A	O00220	468 aa		12.69	□□□□□ -0.38
ABCD4-223	ENST00000555904	ALOX15B	O15296	676 aa		12.69	□□□□□ -0.38
ABCD4-223	ENST00000555904	SIN3B	O75182	1162 aa		12.69	□□□□□ -0.38
ABCD4-223	ENST00000555904	POP4	O95707	220 aa	Known RBP	12.69	□□□□□ -0.38
ABCD4-223	ENST00000555904	CD160	O95971	181 aa		12.69	□□□□□ -0.38
ABCD4-223	ENST00000555904	CCNH	P51946	323 aa	Predicted RBP	12.69	□□□□□ -0.38
ABCD4-223	ENST00000555904	DGKE	P52429	567 aa		12.69	□□□□□ -0.38
ABCD4-223	ENST00000555904	GDF10	P55107	478 aa		12.69	□□□□□ -0.38
ABCD4-223	ENST00000555904	MAX	P61244	160 aa		12.69	□□□□□ -0.38
ABCD4-223	ENST00000555904	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	12.69	□□□□□ -0.38
ABCD4-223	ENST00000555904		Q6ZS52	159 aa		12.69	□□□□□ -0.38
ABCD4-223	ENST00000555904	SYT13	Q7L8C5	426 aa		12.69	□□□□□ -0.38
ABCD4-223	ENST00000555904	OR2A12	Q8NGT7	310 aa		12.69	□□□□□ -0.38
ABCD4-223	ENST00000555904	CLDN23	Q96B33	292 aa		12.69	□□□□□ -0.38
ABCD4-223	ENST00000555904	RTP4	Q96DX8	246 aa		12.69	□□□□□ -0.38
ABCD4-223	ENST00000555904	LRIG1	Q96JA1	1093 aa		12.69	□□□□□ -0.38
ABCD4-223	ENST00000555904	NUDCD1	Q96RS6	583 aa		12.69	□□□□□ -0.38
ABCD4-223	ENST00000555904	TUBGCP5	Q96RT8	1024 aa		12.69	□□□□□ -0.38
ABCD4-223	ENST00000555904	SEMA3C	Q99985	751 aa		12.69	□□□□□ -0.38
ABCD4-223	ENST00000555904	GBA3	Q9H227	469 aa		12.69	□□□□□ -0.38
ABCD4-223	ENST00000555904	ZDHHC6	Q9H6R6	413 aa		12.69	□□□□□ -0.38
ABCD4-223	ENST00000555904	ATP13A3	Q9H7F0	1226 aa		12.69	□□□□□ -0.38
ABCD4-223	ENST00000555904	PCDH9	Q9HC56	1237 aa		12.69	□□□□□ -0.38
ABCD4-223	ENST00000555904	POLM	Q9NP87	494 aa	Predicted RBP	12.69	□□□□□ -0.38
ABCD4-223	ENST00000555904	HECA	Q9UBI9	543 aa	Predicted RBP	12.69	□□□□□ -0.38
ABCD4-223	ENST00000555904	IL36A	Q9UHA7	158 aa		12.69	□□□□□ -0.38
ABCD4-223	ENST00000555904	ATP8A1	Q9Y2Q0	1164 aa		12.69	□□□□□ -0.38
ABCD4-223	ENST00000555904	MYOF	Q9NZM1	2061 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	C1QTNF3-AMACR	E9PGA6	284 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	INSIG1	O15503	277 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	ANXA9	O76027	345 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	ALDH1A2	O94788	518 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	PRNP	P04156	253 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	DCN	P07585	359 aa	Known RBP	12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	SERPINF2	P08697	491 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	NFKB1	P19838	968 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	SERPINA4	P29622	427 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	CSNK1D	P48730	415 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	CLCN5	P51795	746 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	BCL2L1	Q07817	233 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	CAMK2G	Q13555	558 aa	Predicted RBP	12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	MYLK3	Q32MK0	819 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	ALG1L	Q6GMV1	187 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	C8orf74	Q6P047	294 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	DPY19L3	Q6ZPD9	716 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	SRL	Q86TD4	932 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	SPEM1	Q8N4L4	309 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	CNTD1	Q8N815	330 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	OR6K2	Q8NGY2	324 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	GRIN3A	Q8TCU5	1115 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	PTPRN2	Q92932	1015 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	SLCO2A1	Q92959	643 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	PBXIP1	Q96AQ6	731 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	ZNF419	Q96HQ0	510 aa	Predicted RBP	12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	PPP1R16A	Q96I34	528 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	HEPH	Q9BQS7	1158 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	CARD6	Q9BX69	1037 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	FSD1L	Q9BXM9	530 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	OSBPL1A	Q9BXW6	950 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	SLC25A51	Q9H1U9	297 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	CHRD	Q9H2X0	955 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	L2HGDH	Q9H9P8	463 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	GLOD4	Q9HC38	313 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	ASIC3	Q9UHC3	531 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	HCN2	Q9UL51	889 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	AAR2	Q9Y312	384 aa	Known RBP	12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	MIA3	Q5JRA6	1907 aa		12.68	□□□□□ -0.38
ABCD4-223	ENST00000555904	MUC22	E2RYF6	1773 aa	Predicted RBP	12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	MYO10	Q9HD67	2058 aa		12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	MUSK	O15146	869 aa		12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	ADAM23	O75077	832 aa		12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	ZNF821	O75541	412 aa	Predicted RBP	12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	PDGFB	P01127	241 aa	Predicted RBP	12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	IL1B	P01584	269 aa		12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	KRT14	P02533	472 aa		12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	AOC1	P19801	751 aa		12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	FDFT1	P37268	417 aa		12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	CD86	P42081	329 aa		12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	LMAN1	P49257	510 aa		12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	DSC2	Q02487	901 aa		12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	SFSWAP	Q12872	951 aa	Known RBP	12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	GPS1	Q13098	491 aa		12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	TRIP13	Q15645	432 aa	Predicted RBP	12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	CRY1	Q16526	586 aa		12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	PARP6	Q2NL67	630 aa		12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	C9orf64	Q5T6V5	341 aa		12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	FAM46C	Q5VWP2	391 aa		12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	ZNF776	Q68DI1	518 aa	Predicted RBP	12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	CWF19L1	Q69YN2	538 aa	Known RBP	12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	STK40	Q8N2I9	435 aa		12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	PGBD5	Q8N414	524 aa		12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	OR2T3	Q8NH03	318 aa		12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	IMP4	Q96G21	291 aa	Known RBP	12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	RAB17	Q9H0T7	212 aa		12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	MTG2	Q9H4K7	406 aa		12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	NOD2	Q9HC29	1040 aa		12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	PRSS16	Q9NQE7	514 aa		12.67	□□□□□ -0.38
ABCD4-223	ENST00000555904	DYRK4	Q9NR20	520 aa		12.67	□□□□□ -0.38

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