RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 A0A1W2PR77 199 aa20.83■□□□□ 0.93
VTI1B-205ENST00000555543 UPK3BL1B0FP48 263 aa20.83■□□□□ 0.93
VTI1B-205ENST00000555543 UPK3BL2E5RIL1 263 aa20.83■□□□□ 0.93
VTI1B-205ENST00000555543 KRIT1O00522 736 aa20.83■□□□□ 0.93
VTI1B-205ENST00000555543 RNGTTO60942 597 aaKnown RBP20.83■□□□□ 0.93
VTI1B-205ENST00000555543 CER1O95813 267 aa20.83■□□□□ 0.93
VTI1B-205ENST00000555543 HCAR3P49019 387 aa20.83■□□□□ 0.93
VTI1B-205ENST00000555543 PAPOLAP51003 745 aaKnown RBP20.83■□□□□ 0.93
VTI1B-205ENST00000555543 NEK3P51956 506 aa20.83■□□□□ 0.93
VTI1B-205ENST00000555543 SNRPD1P62314 119 aaKnown RBP20.83■□□□□ 0.93
VTI1B-205ENST00000555543 CYTH1Q15438 398 aa20.83■□□□□ 0.93
VTI1B-205ENST00000555543 BOLA3Q53S33 107 aa20.83■□□□□ 0.93
VTI1B-205ENST00000555543 INO80DQ53TQ3 878 aaPredicted RBP20.83■□□□□ 0.93
VTI1B-205ENST00000555543 ARHGAP36Q6ZRI8 547 aa20.83■□□□□ 0.93
VTI1B-205ENST00000555543 POLNQ7Z5Q5 900 aa20.83■□□□□ 0.93
VTI1B-205ENST00000555543 ADAT2Q7Z6V5 191 aaKnown RBP20.83■□□□□ 0.93
VTI1B-205ENST00000555543 TEKT4Q8WW24 435 aa20.83■□□□□ 0.93
VTI1B-205ENST00000555543 CASKIN2Q8WXE0 1202 aa20.83■□□□□ 0.93
VTI1B-205ENST00000555543 TRIM5Q9C035 493 aa20.83■□□□□ 0.93
VTI1B-205ENST00000555543 RBSNQ9H1K0 784 aa20.83■□□□□ 0.93
VTI1B-205ENST00000555543 NHEJ1Q9H9Q4 299 aaPredicted RBP20.83■□□□□ 0.93
VTI1B-205ENST00000555543 AASDHPPTQ9NRN7 309 aa20.83■□□□□ 0.93
VTI1B-205ENST00000555543 ETNK2Q9NVF9 386 aa20.83■□□□□ 0.93
VTI1B-205ENST00000555543 CTTNBP2NLQ9P2B4 639 aa20.83■□□□□ 0.93
VTI1B-205ENST00000555543 TPX2Q9ULW0 747 aaKnown RBP20.83■□□□□ 0.93
VTI1B-205ENST00000555543 H3BRJ5 948 aa20.82■□□□□ 0.92
VTI1B-205ENST00000555543 MYO1FO00160 1098 aa20.82■□□□□ 0.92
VTI1B-205ENST00000555543 KCNK3O14649 394 aa20.82■□□□□ 0.92
VTI1B-205ENST00000555543 VILLO15195 856 aa20.82■□□□□ 0.92
VTI1B-205ENST00000555543 AKR1B10O60218 316 aa20.82■□□□□ 0.92
VTI1B-205ENST00000555543 PRAMEF11O60813 436 aa20.82■□□□□ 0.92
VTI1B-205ENST00000555543 UGT2B4P06133 528 aa20.82■□□□□ 0.92
VTI1B-205ENST00000555543 H2AFZP0C0S5 128 aa20.82■□□□□ 0.92
VTI1B-205ENST00000555543 ADRB3P13945 408 aa20.82■□□□□ 0.92
VTI1B-205ENST00000555543 CTSKP43235 329 aa20.82■□□□□ 0.92
VTI1B-205ENST00000555543 ZNF135P52742 658 aaPredicted RBP20.82■□□□□ 0.92
VTI1B-205ENST00000555543 RHOAP61586 193 aa20.82■□□□□ 0.92
VTI1B-205ENST00000555543 MYLK3Q32MK0 819 aa20.82■□□□□ 0.92
VTI1B-205ENST00000555543 NAPEPLDQ6IQ20 393 aa20.82■□□□□ 0.92
VTI1B-205ENST00000555543 IL27RAQ6UWB1 636 aa20.82■□□□□ 0.92
VTI1B-205ENST00000555543 H2AFVQ71UI9 128 aa20.82■□□□□ 0.92
VTI1B-205ENST00000555543 CNGA4Q8IV77 575 aa20.82■□□□□ 0.92
VTI1B-205ENST00000555543 CTNNBL1Q8WYA6 563 aaPredicted RBP20.82■□□□□ 0.92
VTI1B-205ENST00000555543 EXOC2Q96KP1 924 aa20.82■□□□□ 0.92
VTI1B-205ENST00000555543 GDAP1L1Q96MZ0 367 aa20.82■□□□□ 0.92
VTI1B-205ENST00000555543 CSPG4P5Q96PW8 444 aa20.82■□□□□ 0.92
VTI1B-205ENST00000555543 PCDH18Q9HCL0 1135 aa20.82■□□□□ 0.92
VTI1B-205ENST00000555543 DONSONQ9NYP3 566 aa20.82■□□□□ 0.92
VTI1B-205ENST00000555543 UVRAGQ9P2Y5 699 aa20.82■□□□□ 0.92
VTI1B-205ENST00000555543 UBA2Q9UBT2 640 aaPredicted RBP20.82■□□□□ 0.92
VTI1B-205ENST00000555543 ZFR2Q9UPR6 939 aaKnown RBP20.82■□□□□ 0.92
VTI1B-205ENST00000555543 A0A1W2PQU0 124 aa20.81■□□□□ 0.92
VTI1B-205ENST00000555543 ARHGAP42A6NI28 874 aa20.81■□□□□ 0.92
VTI1B-205ENST00000555543 AKR1B15C9JRZ8 316 aaPredicted RBP20.81■□□□□ 0.92
VTI1B-205ENST00000555543 SH3BP5O60239 455 aa20.81■□□□□ 0.92
VTI1B-205ENST00000555543 POP4O95707 220 aaKnown RBP20.81■□□□□ 0.92
VTI1B-205ENST00000555543 CEACAM1P13688 526 aa20.81■□□□□ 0.92
VTI1B-205ENST00000555543 PRLRP16471 622 aa20.81■□□□□ 0.92
VTI1B-205ENST00000555543 AMPD1P23109 780 aa20.81■□□□□ 0.92
VTI1B-205ENST00000555543 CD38P28907 300 aa20.81■□□□□ 0.92
VTI1B-205ENST00000555543 ABL2P42684 1182 aa20.81■□□□□ 0.92
VTI1B-205ENST00000555543 SLC14A1Q13336 389 aa20.81■□□□□ 0.92
VTI1B-205ENST00000555543 TSR1Q2NL82 804 aaKnown RBP20.81■□□□□ 0.92
VTI1B-205ENST00000555543 PRPF39Q86UA1 669 aaKnown RBP20.81■□□□□ 0.92
VTI1B-205ENST00000555543 TSC1Q92574 1164 aa20.81■□□□□ 0.92
VTI1B-205ENST00000555543 KLK6Q92876 244 aa20.81■□□□□ 0.92
VTI1B-205ENST00000555543 CAMK1GQ96NX5 476 aa20.81■□□□□ 0.92
VTI1B-205ENST00000555543 TM7SF3Q9NS93 570 aa20.81■□□□□ 0.92
VTI1B-205ENST00000555543 CA5BQ9Y2D0 317 aa20.81■□□□□ 0.92
VTI1B-205ENST00000555543 C16orf96A6NNT2 1141 aa20.8■□□□□ 0.92
VTI1B-205ENST00000555543 H0Y8X5 98 aa20.8■□□□□ 0.92
VTI1B-205ENST00000555543 DFFAO00273 331 aa20.8■□□□□ 0.92
VTI1B-205ENST00000555543 INSIG1O15503 277 aa20.8■□□□□ 0.92
VTI1B-205ENST00000555543 SPINT1O43278 529 aa20.8■□□□□ 0.92
VTI1B-205ENST00000555543 PROSCO94903 275 aa20.8■□□□□ 0.92
VTI1B-205ENST00000555543 IGSF6O95976 241 aa20.8■□□□□ 0.92
VTI1B-205ENST00000555543 TMEM253P0C7T8 217 aa20.8■□□□□ 0.92
VTI1B-205ENST00000555543 ZNF883P0CG24 379 aa20.8■□□□□ 0.92
VTI1B-205ENST00000555543 ARL4AP40617 200 aa20.8■□□□□ 0.92
VTI1B-205ENST00000555543 SSR1P43307 286 aaKnown RBP20.8■□□□□ 0.92
VTI1B-205ENST00000555543 C21orf59P57076 290 aa20.8■□□□□ 0.92
VTI1B-205ENST00000555543 FAM193AP78312 1265 aa20.8■□□□□ 0.92
VTI1B-205ENST00000555543 CCDC15Q0P6D6 951 aa20.8■□□□□ 0.92
VTI1B-205ENST00000555543 ZNF284Q2VY69 593 aa20.8■□□□□ 0.92
VTI1B-205ENST00000555543 SETMARQ53H47 684 aaPredicted RBP20.8■□□□□ 0.92
VTI1B-205ENST00000555543 ZNF805Q5CZA5 627 aa20.8■□□□□ 0.92
VTI1B-205ENST00000555543 SEL1L3Q68CR1 1132 aa20.8■□□□□ 0.92
VTI1B-205ENST00000555543 FBXL19Q6PCT2 694 aa20.8■□□□□ 0.92
VTI1B-205ENST00000555543 HORMAD1Q86X24 394 aa20.8■□□□□ 0.92
VTI1B-205ENST00000555543 GAS2L3Q86XJ1 694 aa20.8■□□□□ 0.92
VTI1B-205ENST00000555543 LRIG1Q96JA1 1093 aa20.8■□□□□ 0.92
VTI1B-205ENST00000555543 CCDC42Q96M95 316 aa20.8■□□□□ 0.92
VTI1B-205ENST00000555543 KLHL32Q96NJ5 620 aa20.8■□□□□ 0.92
VTI1B-205ENST00000555543 GGT7Q9UJ14 662 aa20.8■□□□□ 0.92
VTI1B-205ENST00000555543 DMTF1Q9Y222 760 aa20.8■□□□□ 0.92
VTI1B-205ENST00000555543 FADS3Q9Y5Q0 445 aa20.8■□□□□ 0.92
VTI1B-205ENST00000555543 PCDH8O95206 1070 aa20.79■□□□□ 0.92
VTI1B-205ENST00000555543 CD48P09326 243 aa20.79■□□□□ 0.92
VTI1B-205ENST00000555543 GJC1P36383 396 aa20.79■□□□□ 0.92
VTI1B-205ENST00000555543 RGRP47804 291 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms