RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 C3orf38Q5JPI3 329 aa24.66■■□□□ 1.54
FOXA1-204ENST00000554607 SLC47A2Q86VL8 602 aa24.66■■□□□ 1.54
FOXA1-204ENST00000554607 ASB12Q8WXK4 309 aa24.66■■□□□ 1.54
FOXA1-204ENST00000554607 GLMNQ92990 594 aa24.66■■□□□ 1.54
FOXA1-204ENST00000554607 C18orf8Q96DM3 657 aa24.66■■□□□ 1.54
FOXA1-204ENST00000554607 SLC46A1Q96NT5 459 aa24.66■■□□□ 1.54
FOXA1-204ENST00000554607 TBCBQ99426 244 aa24.66■■□□□ 1.54
FOXA1-204ENST00000554607 C1QTNF2Q9BXJ5 285 aa24.66■■□□□ 1.54
FOXA1-204ENST00000554607 PDCL3Q9H2J4 239 aa24.66■■□□□ 1.54
FOXA1-204ENST00000554607 RWDD2AQ9UIY3 292 aa24.66■■□□□ 1.54
FOXA1-204ENST00000554607 DNAJC12Q9UKB3 198 aa24.66■■□□□ 1.54
FOXA1-204ENST00000554607 CXorf51AA0A1B0GTR3 108 aa24.65■■□□□ 1.54
FOXA1-204ENST00000554607 FOXN3O00409 490 aaPredicted RBP24.65■■□□□ 1.54
FOXA1-204ENST00000554607 TCEA3O75764 348 aa24.65■■□□□ 1.54
FOXA1-204ENST00000554607 RPIAP49247 311 aa24.65■■□□□ 1.54
FOXA1-204ENST00000554607 GUSBP11Q6P575 273 aa24.65■■□□□ 1.54
FOXA1-204ENST00000554607 RBM44Q6ZP01 1051 aaKnown RBP24.65■■□□□ 1.54
FOXA1-204ENST00000554607 PLPP6Q8IY26 295 aa24.65■■□□□ 1.54
FOXA1-204ENST00000554607 DENND6BQ8NEG7 585 aa24.65■■□□□ 1.54
FOXA1-204ENST00000554607 LMX1AQ8TE12 382 aa24.65■■□□□ 1.54
FOXA1-204ENST00000554607 KLF6Q99612 283 aaPredicted RBP24.65■■□□□ 1.54
FOXA1-204ENST00000554607 ZYG11BQ9C0D3 744 aa24.65■■□□□ 1.54
FOXA1-204ENST00000554607 PLCB1Q9NQ66 1216 aa24.65■■□□□ 1.54
FOXA1-204ENST00000554607 HECAQ9UBI9 543 aaPredicted RBP24.65■■□□□ 1.54
FOXA1-204ENST00000554607 SPASTQ9UBP0 616 aa24.65■■□□□ 1.54
FOXA1-204ENST00000554607 SSUH2Q9Y2M2 353 aa24.65■■□□□ 1.54
FOXA1-204ENST00000554607 PCDHGA8Q9Y5G5 932 aa24.65■■□□□ 1.54
FOXA1-204ENST00000554607 COL6A6A6NMZ7 2263 aa24.65■■□□□ 1.54
FOXA1-204ENST00000554607 IGLON5A6NGN9 336 aa24.64■■□□□ 1.54
FOXA1-204ENST00000554607 NEMP1O14524 444 aa24.64■■□□□ 1.54
FOXA1-204ENST00000554607 GABRB2P47870 512 aa24.64■■□□□ 1.54
FOXA1-204ENST00000554607 ARF5P84085 180 aa24.64■■□□□ 1.54
FOXA1-204ENST00000554607 GNA12Q03113 381 aa24.64■■□□□ 1.54
FOXA1-204ENST00000554607 PTK2BQ14289 1009 aa24.64■■□□□ 1.54
FOXA1-204ENST00000554607 DEFB133Q30KQ1 61 aa24.64■■□□□ 1.54
FOXA1-204ENST00000554607 PARS2Q7L3T8 475 aaKnown RBP24.64■■□□□ 1.54
FOXA1-204ENST00000554607 WDR48Q8TAF3 677 aa24.64■■□□□ 1.54
FOXA1-204ENST00000554607 ISG20Q96AZ6 181 aaKnown RBP24.64■■□□□ 1.54
FOXA1-204ENST00000554607 ATXN7L3BQ96GX2 97 aa24.64■■□□□ 1.54
FOXA1-204ENST00000554607 PPARGC1AQ9UBK2 798 aaKnown RBP24.64■■□□□ 1.54
FOXA1-204ENST00000554607 ZNF212Q9UDV6 495 aa24.64■■□□□ 1.54
FOXA1-204ENST00000554607 KLF15Q9UIH9 416 aa24.64■■□□□ 1.54
FOXA1-204ENST00000554607 ENTPD2Q9Y5L3 495 aa24.64■■□□□ 1.54
FOXA1-204ENST00000554607 CDH5P33151 784 aaPredicted RBP24.63■■□□□ 1.53
FOXA1-204ENST00000554607 ETFBP38117 255 aa24.63■■□□□ 1.53
FOXA1-204ENST00000554607 MLLT3P42568 568 aaPredicted RBP24.63■■□□□ 1.53
FOXA1-204ENST00000554607 FAM102AQ5T9C2 384 aaPredicted RBP24.63■■□□□ 1.53
FOXA1-204ENST00000554607 FAM71AQ8IYT1 594 aa24.63■■□□□ 1.53
FOXA1-204ENST00000554607 ARHGEF26Q96DR7 871 aa24.63■■□□□ 1.53
FOXA1-204ENST00000554607 ZDHHC6Q9H6R6 413 aa24.63■■□□□ 1.53
FOXA1-204ENST00000554607 TMPRSS4Q9NRS4 437 aa24.63■■□□□ 1.53
FOXA1-204ENST00000554607 FCF1Q9Y324 198 aaKnown RBP24.63■■□□□ 1.53
FOXA1-204ENST00000554607 DOCK4Q8N1I0 1966 aa24.62■■□□□ 1.53
FOXA1-204ENST00000554607 GEMIN4P57678 1058 aaKnown RBP24.62■■□□□ 1.53
FOXA1-204ENST00000554607 PFN3P60673 137 aa24.62■■□□□ 1.53
FOXA1-204ENST00000554607 SKOR1P84550 965 aa24.62■■□□□ 1.53
FOXA1-204ENST00000554607 RYBPQ8N488 228 aaPredicted RBP24.62■■□□□ 1.53
FOXA1-204ENST00000554607 ARL14Q8N4G2 192 aa24.62■■□□□ 1.53
FOXA1-204ENST00000554607 TTC9Q92623 222 aa24.62■■□□□ 1.53
FOXA1-204ENST00000554607 NAT6Q93015 286 aa24.62■■□□□ 1.53
FOXA1-204ENST00000554607 TBATAQ96M53 351 aa24.62■■□□□ 1.53
FOXA1-204ENST00000554607 BOCQ9BWV1 1114 aa24.62■■□□□ 1.53
FOXA1-204ENST00000554607 SIX2Q9NPC8 291 aa24.62■■□□□ 1.53
FOXA1-204ENST00000554607 C16orf96A6NNT2 1141 aa24.61■■□□□ 1.53
FOXA1-204ENST00000554607 SPINT1O43278 529 aa24.61■■□□□ 1.53
FOXA1-204ENST00000554607 C6P13671 934 aa24.61■■□□□ 1.53
FOXA1-204ENST00000554607 MTIF2P46199 727 aaKnown RBP24.61■■□□□ 1.53
FOXA1-204ENST00000554607 THOP1P52888 689 aa24.61■■□□□ 1.53
FOXA1-204ENST00000554607 EIF2B5Q13144 721 aaKnown RBP24.61■■□□□ 1.53
FOXA1-204ENST00000554607 ZNF805Q5CZA5 627 aa24.61■■□□□ 1.53
FOXA1-204ENST00000554607 ARTNQ5T4W7 220 aa24.61■■□□□ 1.53
FOXA1-204ENST00000554607 XYLT1Q86Y38 959 aa24.61■■□□□ 1.53
FOXA1-204ENST00000554607 DRC7Q8IY82 874 aa24.61■■□□□ 1.53
FOXA1-204ENST00000554607 MSANTD4Q8NCY6 345 aa24.61■■□□□ 1.53
FOXA1-204ENST00000554607 WDR36Q8NI36 951 aaKnown RBP24.61■■□□□ 1.53
FOXA1-204ENST00000554607 RETREG1Q9H6L5 497 aa24.61■■□□□ 1.53
FOXA1-204ENST00000554607 APOBEC3BQ9UH17 382 aaKnown RBP24.61■■□□□ 1.53
FOXA1-204ENST00000554607 AJAP1Q9UKB5 411 aaPredicted RBP24.61■■□□□ 1.53
FOXA1-204ENST00000554607 A0A1W2PNU3 283 aaPredicted RBP24.6■■□□□ 1.53
FOXA1-204ENST00000554607 B8ZZF3 427 aa24.6■■□□□ 1.53
FOXA1-204ENST00000554607 K7ENP7 123 aa24.6■■□□□ 1.53
FOXA1-204ENST00000554607 MUSKO15146 869 aa24.6■■□□□ 1.53
FOXA1-204ENST00000554607 POLD3Q15054 466 aaPredicted RBP24.6■■□□□ 1.53
FOXA1-204ENST00000554607 INO80CQ6PI98 192 aaPredicted RBP24.6■■□□□ 1.53
FOXA1-204ENST00000554607 PRR11Q96HE9 360 aaPredicted RBP24.6■■□□□ 1.53
FOXA1-204ENST00000554607 OSBPL1AQ9BXW6 950 aa24.6■■□□□ 1.53
FOXA1-204ENST00000554607 TM6SF2Q9BZW4 377 aa24.6■■□□□ 1.53
FOXA1-204ENST00000554607 TENM4Q6N022 2769 aa24.59■■□□□ 1.53
FOXA1-204ENST00000554607 CDRT15L2A8MXV6 281 aa24.59■■□□□ 1.53
FOXA1-204ENST00000554607 LMO7DNF2Z398 122 aa24.59■■□□□ 1.53
FOXA1-204ENST00000554607 TOR1BO14657 336 aa24.59■■□□□ 1.53
FOXA1-204ENST00000554607 CD160O95971 181 aa24.59■■□□□ 1.53
FOXA1-204ENST00000554607 ANXA6P08133 673 aa24.59■■□□□ 1.53
FOXA1-204ENST00000554607 PNMA6AP0CW24 399 aaPredicted RBP24.59■■□□□ 1.53
FOXA1-204ENST00000554607 FLT3P36888 993 aa24.59■■□□□ 1.53
FOXA1-204ENST00000554607 ABL2P42684 1182 aa24.59■■□□□ 1.53
FOXA1-204ENST00000554607 ADKP55263 362 aaKnown RBP24.59■■□□□ 1.53
FOXA1-204ENST00000554607 SNRPD1P62314 119 aaKnown RBP24.59■■□□□ 1.53
FOXA1-204ENST00000554607 YPEL5P62699 121 aa24.59■■□□□ 1.53
FOXA1-204ENST00000554607 LY6DQ14210 128 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms