RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 TRIM2Q9C040 744 aa4.26□□□□□ -1.73
LSM6P2-201ENST00000552208 CXorf56Q9H5V9 222 aa4.26□□□□□ -1.73
LSM6P2-201ENST00000552208 SLC35C2Q9NQQ7 365 aa4.26□□□□□ -1.73
LSM6P2-201ENST00000552208 ENTPD7Q9NQZ7 604 aa4.26□□□□□ -1.73
LSM6P2-201ENST00000552208 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.26□□□□□ -1.73
LSM6P2-201ENST00000552208 PLK2Q9NYY3 685 aa4.26□□□□□ -1.73
LSM6P2-201ENST00000552208 SEC63Q9UGP8 760 aaKnown RBP4.26□□□□□ -1.73
LSM6P2-201ENST00000552208 ST6GALNAC2Q9UJ37 374 aa4.26□□□□□ -1.73
LSM6P2-201ENST00000552208 FBXO4Q9UKT5 387 aa4.26□□□□□ -1.73
LSM6P2-201ENST00000552208 PADI1Q9ULC6 663 aa4.26□□□□□ -1.73
LSM6P2-201ENST00000552208 PCDHGB5Q9Y5G0 923 aa4.26□□□□□ -1.73
LSM6P2-201ENST00000552208 CCDC151A5D8V7 595 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 EIF3CLB5ME19 914 aaKnown RBP4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 USP17L23D6RBM5 183 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 IPO7O95373 1038 aaKnown RBP4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 HOXB5P09067 269 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 EBLN1P0CF75 366 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 SAT1P21673 171 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 MUTP22033 750 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 OAS2P29728 719 aaKnown RBP4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 CTNNA1P35221 906 aaKnown RBP4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 SKIV2L2P42285 1042 aaKnown RBP4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 SLC15A1P46059 708 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 NRIP1P48552 1158 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 GNAQP50148 359 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 MRPL12P52815 198 aaKnown RBP4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 ARSFP54793 590 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 RRP1P56182 461 aaKnown RBP4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 MST1RQ04912 1400 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 SLC18A2Q05940 514 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 TFCP2Q12800 502 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 PRPF4BQ13523 1007 aaKnown RBP4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 BAATQ14032 418 aaPredicted RBP4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 FGFBP1Q14512 234 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 ME3Q16798 604 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 ANXA2RQ3ZCQ2 193 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 SOWAHCQ53LP3 525 aaPredicted RBP4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 ARL13AQ5H913 290 aaPredicted RBP4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 CXorf66Q5JRM2 361 aaPredicted RBP4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 NUGGCQ68CJ6 796 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 PMS2CLQ68D20 193 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 HMBOX1Q6NT76 420 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 TSSK4Q6SA08 328 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 CFAP77Q6ZQR2 320 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 LCNL1Q6ZST4 164 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 PLPPR4Q7Z2D5 763 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 MRGPREQ86SM8 312 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 GPAT4Q86UL3 456 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 DNAAF5Q86Y56 855 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 TTC9BQ8N6N2 239 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 TMEM217Q8N7C4 229 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 AVL9Q8NBF6 648 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 GDPD5Q8WTR4 605 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 CACTINQ8WUQ7 758 aaKnown RBP4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 ZFPM2Q8WW38 1151 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 LINC00476Q8WZB0 136 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 HAS1Q92839 578 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 PABPC5Q96DU9 382 aaKnown RBP4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 VMP1Q96GC9 406 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 CCDC34Q96HJ3 373 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 HS6ST2Q96MM7 605 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 TEFMQ96QE5 360 aaKnown RBP4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 OR2A14Q96R47 310 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 SRSF8Q9BRL6 282 aaKnown RBP4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 MLST8Q9BVC4 326 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 APOL6Q9BWW8 343 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 PARD6AQ9NPB6 346 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 SLC6A13Q9NSD5 602 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 RRP7BPQ9NSQ0 103 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 ARGLU1Q9NWB6 273 aaPredicted RBP4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 DLGAP2Q9P1A6 1054 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 CNOT8Q9UFF9 292 aaKnown RBP4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 CNOT11Q9UKZ1 510 aaKnown RBP4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 NENFQ9UMX5 172 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 DHDHQ9UQ10 334 aa4.25□□□□□ -1.73
LSM6P2-201ENST00000552208 EMSYQ7Z589 1322 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 SALL3Q9BXA9 1300 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 A0A0A0MQY5 61 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 TTC36A6NLP5 189 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 BTBD19C9JJ37 291 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 NPIPB11E5RHQ5 1161 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 H7C1Q1 480 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 SNAP23O00161 211 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 CTDSP2O14595 271 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 RRHO14718 337 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 ADAMDEC1O15204 470 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 HCRTR2O43614 444 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 EXOC3O60645 756 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 CBX6O95503 412 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 TFP02787 698 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 IRF1P10914 325 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 TNFRSF1AP19438 455 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 DRD4P21917 467 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 POU1F1P28069 291 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 EEF1DP29692 281 aaKnown RBP4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 RYKP34925 604 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 ADRA1BP35368 520 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 CCT8P50990 548 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 ZNF41P51814 821 aaPredicted RBP4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 HDAC4P56524 1084 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms