RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 ARIH1Q9Y4X5 557 aaPredicted RBP10.11□□□□□ -0.79
RAB5B-206ENST00000549505 ASB3Q9Y575 518 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 A0A087X1B8 175 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 ADAM12O43184 909 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 CPB1P15086 417 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 DNAJB13P59910 316 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 POU4F1Q01851 419 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 DUSP4Q13115 394 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 LBRQ14739 615 aaKnown RBP10.11□□□□□ -0.79
RAB5B-206ENST00000549505 TTC31Q49AM3 519 aaPredicted RBP10.11□□□□□ -0.79
RAB5B-206ENST00000549505 FAM47EQ6ZV65 393 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 SPATA22Q8NHS9 363 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 VPS39Q96JC1 886 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 ZNF333Q96JL9 665 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 PCMTD2Q9NV79 361 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 UXTQ9UBK9 157 aaPredicted RBP10.11□□□□□ -0.79
RAB5B-206ENST00000549505 PCDHB12Q9Y5F1 795 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 CDY1Q9Y6F8 540 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 SLC12A8A0AV02 714 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 RAMP2O60895 175 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 SEC24AO95486 1093 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 F11P03951 625 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 ALDH7A1P49419 539 aaKnown RBP10.1□□□□□ -0.79
RAB5B-206ENST00000549505 OLIG2Q13516 323 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 FASTKD1Q53R41 847 aaKnown RBP10.1□□□□□ -0.79
RAB5B-206ENST00000549505 C10orf120Q5SQS8 335 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 HECTD3Q5T447 861 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 N4BP2L1Q5TBK1 243 aaPredicted RBP10.1□□□□□ -0.79
RAB5B-206ENST00000549505 SDHAF4Q5VUM1 108 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 CASC4Q6P4E1 433 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 CYB5D1Q6P9G0 228 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 ZYG11AQ6WRX3 759 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.1□□□□□ -0.793e-6■□□□□ 8.4
RAB5B-206ENST00000549505 TMEM150AQ86TG1 271 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 EGFL6Q8IUX8 553 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 DNAAF3Q8N9W5 541 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 ARMC2Q8NEN0 867 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 GABPB2Q8TAK5 448 aaPredicted RBP10.1□□□□□ -0.79
RAB5B-206ENST00000549505 STYXQ8WUJ0 223 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 PDCD6IPQ8WUM4 868 aaKnown RBP10.1□□□□□ -0.79
RAB5B-206ENST00000549505 DEFB118Q96PH6 123 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 PSKH2Q96QS6 385 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 DDX50Q9BQ39 737 aaKnown RBP10.1□□□□□ -0.79
RAB5B-206ENST00000549505 FICDQ9BVA6 458 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 MMADHCQ9H3L0 296 aaPredicted RBP10.1□□□□□ -0.79
RAB5B-206ENST00000549505 SUFUQ9UMX1 484 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 NUMBLQ9Y6R0 609 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 DENND4CQ5VZ89 1909 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 FGF1P05230 155 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 SBK3P0C264 359 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 SLC6A4P31645 630 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 ETFBP38117 255 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 SLC11A2P49281 568 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 SERPINH1P50454 418 aaKnown RBP10.1□□□□□ -0.79
RAB5B-206ENST00000549505 RASSF2P50749 326 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 STX3Q13277 289 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 PLD1Q13393 1074 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 POLD3Q15054 466 aaPredicted RBP10.1□□□□□ -0.79
RAB5B-206ENST00000549505 TSNAXIP1Q2TAA8 658 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 MGAT5BQ3V5L5 792 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 RABGAP1LQ5R372 815 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 PSMG2Q969U7 264 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 MRRFQ96E11 262 aaKnown RBP10.1□□□□□ -0.79
RAB5B-206ENST00000549505 AGAP2Q99490 1192 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 PAIP2Q9BPZ3 127 aaKnown RBP10.1□□□□□ -0.79
RAB5B-206ENST00000549505 C12orf65Q9H3J6 166 aaKnown RBP10.1□□□□□ -0.79
RAB5B-206ENST00000549505 CCSER2Q9H7U1 834 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 KLC4Q9NSK0 619 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 C20orf96Q9NUD7 363 aaPredicted RBP10.1□□□□□ -0.79
RAB5B-206ENST00000549505 OXSMQ9NWU1 459 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 MAGED2Q9UNF1 606 aaPredicted RBP10.1□□□□□ -0.79
RAB5B-206ENST00000549505 SSX2IPQ9Y2D8 614 aa10.1□□□□□ -0.79
RAB5B-206ENST00000549505 J3KR12 359 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 COCHO43405 550 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 STC2O76061 302 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 MT-CYBP00156 380 aaPredicted RBP10.09□□□□□ -0.79
RAB5B-206ENST00000549505 AHSGP02765 367 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 CLCN5P51795 746 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 ARFIP2P53365 341 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 HTRA4P83105 476 aaPredicted RBP10.09□□□□□ -0.79
RAB5B-206ENST00000549505 TLE2Q04725 743 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 SLC10A7Q0GE19 358 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 GALNT1Q10472 559 aaPredicted RBP10.09□□□□□ -0.79
RAB5B-206ENST00000549505 SH2D4BQ5SQS7 431 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 PRSS55Q6UWB4 352 aaPredicted RBP10.09□□□□□ -0.79
RAB5B-206ENST00000549505 OR13J1Q8NGT2 312 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 MYEOVQ96EZ4 313 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 PRICKLE1Q96MT3 831 aaPredicted RBP10.09□□□□□ -0.79
RAB5B-206ENST00000549505 ZNF778Q96MU6 729 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 ZNF558Q96NG5 402 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 PGLYRP2Q96PD5 576 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 TMEM120AQ9BXJ8 343 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 C20orf27Q9GZN8 174 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 C1orf21Q9H246 121 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 TMEM216Q9P0N5 145 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 HCSTQ9UBK5 93 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 SLC27A5Q9Y2P5 690 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 OR51B4Q9Y5P0 310 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 ANKRD36A6QL64 1941 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 HELZP42694 1942 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms